GO Enrichment Analysis of Co-expressed Genes with
AT1G48570
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000740: nuclear membrane fusion | 0.00E+00 |
| 2 | GO:0032211: negative regulation of telomere maintenance via telomerase | 0.00E+00 |
| 3 | GO:0006412: translation | 4.09E-70 |
| 4 | GO:0042254: ribosome biogenesis | 3.63E-20 |
| 5 | GO:0000027: ribosomal large subunit assembly | 5.95E-13 |
| 6 | GO:0000028: ribosomal small subunit assembly | 1.77E-06 |
| 7 | GO:1902626: assembly of large subunit precursor of preribosome | 4.89E-06 |
| 8 | GO:0000387: spliceosomal snRNP assembly | 5.02E-06 |
| 9 | GO:0006458: 'de novo' protein folding | 7.14E-05 |
| 10 | GO:0080156: mitochondrial mRNA modification | 1.20E-04 |
| 11 | GO:0006407: rRNA export from nucleus | 1.64E-04 |
| 12 | GO:0000494: box C/D snoRNA 3'-end processing | 1.64E-04 |
| 13 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.64E-04 |
| 14 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.64E-04 |
| 15 | GO:1990258: histone glutamine methylation | 1.64E-04 |
| 16 | GO:0009735: response to cytokinin | 1.78E-04 |
| 17 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 3.73E-04 |
| 18 | GO:0045041: protein import into mitochondrial intermembrane space | 3.73E-04 |
| 19 | GO:0010198: synergid death | 3.73E-04 |
| 20 | GO:0006626: protein targeting to mitochondrion | 4.03E-04 |
| 21 | GO:0002181: cytoplasmic translation | 6.11E-04 |
| 22 | GO:0042256: mature ribosome assembly | 6.11E-04 |
| 23 | GO:0061077: chaperone-mediated protein folding | 7.57E-04 |
| 24 | GO:0009558: embryo sac cellularization | 8.73E-04 |
| 25 | GO:0070301: cellular response to hydrogen peroxide | 8.73E-04 |
| 26 | GO:0051085: chaperone mediated protein folding requiring cofactor | 8.73E-04 |
| 27 | GO:0006241: CTP biosynthetic process | 8.73E-04 |
| 28 | GO:0006165: nucleoside diphosphate phosphorylation | 8.73E-04 |
| 29 | GO:0006228: UTP biosynthetic process | 8.73E-04 |
| 30 | GO:0006164: purine nucleotide biosynthetic process | 8.73E-04 |
| 31 | GO:0009651: response to salt stress | 1.07E-03 |
| 32 | GO:0009165: nucleotide biosynthetic process | 1.16E-03 |
| 33 | GO:1900864: mitochondrial RNA modification | 1.16E-03 |
| 34 | GO:0006183: GTP biosynthetic process | 1.16E-03 |
| 35 | GO:0010197: polar nucleus fusion | 1.21E-03 |
| 36 | GO:0031167: rRNA methylation | 1.47E-03 |
| 37 | GO:0000398: mRNA splicing, via spliceosome | 1.49E-03 |
| 38 | GO:0009409: response to cold | 1.69E-03 |
| 39 | GO:0000741: karyogamy | 1.80E-03 |
| 40 | GO:0000245: spliceosomal complex assembly | 2.17E-03 |
| 41 | GO:0009955: adaxial/abaxial pattern specification | 2.17E-03 |
| 42 | GO:0042026: protein refolding | 2.17E-03 |
| 43 | GO:0050821: protein stabilization | 2.95E-03 |
| 44 | GO:0001510: RNA methylation | 3.37E-03 |
| 45 | GO:0006189: 'de novo' IMP biosynthetic process | 3.81E-03 |
| 46 | GO:0007338: single fertilization | 3.81E-03 |
| 47 | GO:0048507: meristem development | 3.81E-03 |
| 48 | GO:0008283: cell proliferation | 4.53E-03 |
| 49 | GO:0009644: response to high light intensity | 4.90E-03 |
| 50 | GO:0009965: leaf morphogenesis | 5.09E-03 |
| 51 | GO:0010015: root morphogenesis | 5.25E-03 |
| 52 | GO:0006913: nucleocytoplasmic transport | 5.25E-03 |
| 53 | GO:0006820: anion transport | 5.77E-03 |
| 54 | GO:0045037: protein import into chloroplast stroma | 5.77E-03 |
| 55 | GO:0010102: lateral root morphogenesis | 6.30E-03 |
| 56 | GO:0006446: regulation of translational initiation | 6.85E-03 |
| 57 | GO:0048467: gynoecium development | 6.85E-03 |
| 58 | GO:0006414: translational elongation | 8.37E-03 |
| 59 | GO:0009553: embryo sac development | 8.42E-03 |
| 60 | GO:0009116: nucleoside metabolic process | 8.59E-03 |
| 61 | GO:0030150: protein import into mitochondrial matrix | 8.59E-03 |
| 62 | GO:0007005: mitochondrion organization | 1.05E-02 |
| 63 | GO:0008033: tRNA processing | 1.32E-02 |
| 64 | GO:0009793: embryo development ending in seed dormancy | 1.54E-02 |
| 65 | GO:0006635: fatty acid beta-oxidation | 1.62E-02 |
| 66 | GO:0009567: double fertilization forming a zygote and endosperm | 1.86E-02 |
| 67 | GO:0006970: response to osmotic stress | 2.51E-02 |
| 68 | GO:0006811: ion transport | 2.72E-02 |
| 69 | GO:0006364: rRNA processing | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 2 | GO:0003735: structural constituent of ribosome | 1.28E-88 |
| 3 | GO:0003729: mRNA binding | 7.21E-30 |
| 4 | GO:0019843: rRNA binding | 5.12E-11 |
| 5 | GO:0003723: RNA binding | 6.47E-06 |
| 6 | GO:0008097: 5S rRNA binding | 1.14E-05 |
| 7 | GO:1990259: histone-glutamine methyltransferase activity | 1.64E-04 |
| 8 | GO:0035614: snRNA stem-loop binding | 1.64E-04 |
| 9 | GO:0044183: protein binding involved in protein folding | 3.08E-04 |
| 10 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 3.73E-04 |
| 11 | GO:0030619: U1 snRNA binding | 3.73E-04 |
| 12 | GO:0004839: ubiquitin activating enzyme activity | 3.73E-04 |
| 13 | GO:0003697: single-stranded DNA binding | 4.00E-04 |
| 14 | GO:0008649: rRNA methyltransferase activity | 6.11E-04 |
| 15 | GO:0004550: nucleoside diphosphate kinase activity | 8.73E-04 |
| 16 | GO:0004749: ribose phosphate diphosphokinase activity | 8.73E-04 |
| 17 | GO:0051082: unfolded protein binding | 1.24E-03 |
| 18 | GO:0008641: small protein activating enzyme activity | 1.47E-03 |
| 19 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 1.80E-03 |
| 20 | GO:0042162: telomeric DNA binding | 2.55E-03 |
| 21 | GO:0030515: snoRNA binding | 2.55E-03 |
| 22 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.78E-03 |
| 23 | GO:0043022: ribosome binding | 2.95E-03 |
| 24 | GO:0015288: porin activity | 2.95E-03 |
| 25 | GO:0008308: voltage-gated anion channel activity | 3.37E-03 |
| 26 | GO:0001055: RNA polymerase II activity | 4.27E-03 |
| 27 | GO:0001054: RNA polymerase I activity | 5.25E-03 |
| 28 | GO:0001056: RNA polymerase III activity | 5.77E-03 |
| 29 | GO:0031072: heat shock protein binding | 6.30E-03 |
| 30 | GO:0015266: protein channel activity | 6.30E-03 |
| 31 | GO:0008237: metallopeptidase activity | 1.94E-02 |
| 32 | GO:0003746: translation elongation factor activity | 3.01E-02 |
| 33 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.45E-02 |
| 34 | GO:0003690: double-stranded DNA binding | 4.56E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 3 | GO:0005840: ribosome | 1.32E-57 |
| 4 | GO:0022626: cytosolic ribosome | 1.63E-53 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 1.43E-44 |
| 6 | GO:0022627: cytosolic small ribosomal subunit | 2.06E-35 |
| 7 | GO:0005829: cytosol | 3.75E-21 |
| 8 | GO:0005730: nucleolus | 9.66E-21 |
| 9 | GO:0005737: cytoplasm | 2.62E-15 |
| 10 | GO:0009506: plasmodesma | 1.13E-10 |
| 11 | GO:0016020: membrane | 2.24E-09 |
| 12 | GO:0005774: vacuolar membrane | 6.94E-09 |
| 13 | GO:0015934: large ribosomal subunit | 9.16E-07 |
| 14 | GO:0015935: small ribosomal subunit | 9.42E-07 |
| 15 | GO:0005685: U1 snRNP | 3.67E-06 |
| 16 | GO:0034719: SMN-Sm protein complex | 4.89E-06 |
| 17 | GO:0005682: U5 snRNP | 2.11E-05 |
| 18 | GO:0005687: U4 snRNP | 3.42E-05 |
| 19 | GO:0097526: spliceosomal tri-snRNP complex | 3.42E-05 |
| 20 | GO:0005689: U12-type spliceosomal complex | 7.14E-05 |
| 21 | GO:0005618: cell wall | 1.48E-04 |
| 22 | GO:0030686: 90S preribosome | 1.64E-04 |
| 23 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.85E-04 |
| 24 | GO:0071011: precatalytic spliceosome | 2.25E-04 |
| 25 | GO:0005686: U2 snRNP | 2.65E-04 |
| 26 | GO:0071013: catalytic step 2 spliceosome | 3.08E-04 |
| 27 | GO:0048471: perinuclear region of cytoplasm | 3.08E-04 |
| 28 | GO:0005773: vacuole | 3.69E-04 |
| 29 | GO:0071010: prespliceosome | 3.73E-04 |
| 30 | GO:0005697: telomerase holoenzyme complex | 3.73E-04 |
| 31 | GO:0019013: viral nucleocapsid | 4.03E-04 |
| 32 | GO:0034715: pICln-Sm protein complex | 6.11E-04 |
| 33 | GO:0031897: Tic complex | 1.16E-03 |
| 34 | GO:0005739: mitochondrion | 1.66E-03 |
| 35 | GO:0031428: box C/D snoRNP complex | 1.80E-03 |
| 36 | GO:0000243: commitment complex | 1.80E-03 |
| 37 | GO:0005762: mitochondrial large ribosomal subunit | 2.17E-03 |
| 38 | GO:0005622: intracellular | 2.85E-03 |
| 39 | GO:0071004: U2-type prespliceosome | 2.95E-03 |
| 40 | GO:0046930: pore complex | 3.37E-03 |
| 41 | GO:0005742: mitochondrial outer membrane translocase complex | 3.37E-03 |
| 42 | GO:0005763: mitochondrial small ribosomal subunit | 3.81E-03 |
| 43 | GO:0005736: DNA-directed RNA polymerase I complex | 3.81E-03 |
| 44 | GO:0005666: DNA-directed RNA polymerase III complex | 4.27E-03 |
| 45 | GO:0015030: Cajal body | 4.27E-03 |
| 46 | GO:0016604: nuclear body | 4.27E-03 |
| 47 | GO:0000418: DNA-directed RNA polymerase IV complex | 4.75E-03 |
| 48 | GO:0005852: eukaryotic translation initiation factor 3 complex | 5.25E-03 |
| 49 | GO:0032040: small-subunit processome | 5.77E-03 |
| 50 | GO:0005665: DNA-directed RNA polymerase II, core complex | 5.77E-03 |
| 51 | GO:0009508: plastid chromosome | 6.30E-03 |
| 52 | GO:0005681: spliceosomal complex | 7.21E-03 |
| 53 | GO:0000419: DNA-directed RNA polymerase V complex | 8.00E-03 |
| 54 | GO:0005758: mitochondrial intermembrane space | 8.59E-03 |
| 55 | GO:0005886: plasma membrane | 9.78E-03 |
| 56 | GO:0005741: mitochondrial outer membrane | 9.84E-03 |
| 57 | GO:0009507: chloroplast | 1.46E-02 |
| 58 | GO:0009295: nucleoid | 1.94E-02 |
| 59 | GO:0005743: mitochondrial inner membrane | 3.96E-02 |