co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G45130

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090627: plant epidermal cell differentiation	0.00E+00
2	GO:0090279: regulation of calcium ion import	0.00E+00
3	GO:1905177: tracheary element differentiation	0.00E+00
4	GO:0071474: cellular hyperosmotic response	0.00E+00
5	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
6	GO:0030155: regulation of cell adhesion	0.00E+00
7	GO:0000025: maltose catabolic process	0.00E+00
8	GO:0005983: starch catabolic process	1.88E-05
9	GO:0009266: response to temperature stimulus	2.86E-05
10	GO:0010017: red or far-red light signaling pathway	7.63E-05
11	GO:0005980: glycogen catabolic process	2.06E-04
12	GO:0071902: positive regulation of protein serine/threonine kinase activity	2.06E-04
13	GO:0010028: xanthophyll cycle	2.06E-04
14	GO:0000023: maltose metabolic process	2.06E-04
15	GO:0006782: protoporphyrinogen IX biosynthetic process	3.65E-04
16	GO:0015995: chlorophyll biosynthetic process	3.89E-04
17	GO:0009773: photosynthetic electron transport in photosystem I	4.23E-04
18	GO:0005976: polysaccharide metabolic process	4.62E-04
19	GO:0031648: protein destabilization	4.62E-04
20	GO:0016122: xanthophyll metabolic process	4.62E-04
21	GO:0030388: fructose 1,6-bisphosphate metabolic process	4.62E-04
22	GO:0051262: protein tetramerization	4.62E-04
23	GO:0006094: gluconeogenesis	5.50E-04
24	GO:0006000: fructose metabolic process	7.52E-04
25	GO:0010506: regulation of autophagy	7.52E-04
26	GO:0071230: cellular response to amino acid stimulus	7.52E-04
27	GO:0010623: programmed cell death involved in cell development	7.52E-04
28	GO:0080055: low-affinity nitrate transport	7.52E-04
29	GO:0031929: TOR signaling	7.52E-04
30	GO:0048281: inflorescence morphogenesis	7.52E-04
31	GO:0009409: response to cold	9.38E-04
32	GO:0009636: response to toxic substance	9.53E-04
33	GO:0010148: transpiration	1.07E-03
34	GO:0010731: protein glutathionylation	1.07E-03
35	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.07E-03
36	GO:0010600: regulation of auxin biosynthetic process	1.43E-03
37	GO:0006552: leucine catabolic process	1.43E-03
38	GO:0010508: positive regulation of autophagy	1.43E-03
39	GO:0006749: glutathione metabolic process	1.43E-03
40	GO:0015846: polyamine transport	1.43E-03
41	GO:0010021: amylopectin biosynthetic process	1.43E-03
42	GO:0006808: regulation of nitrogen utilization	1.43E-03
43	GO:0010023: proanthocyanidin biosynthetic process	1.43E-03
44	GO:0009765: photosynthesis, light harvesting	1.43E-03
45	GO:0006109: regulation of carbohydrate metabolic process	1.43E-03
46	GO:0015994: chlorophyll metabolic process	1.43E-03
47	GO:0035434: copper ion transmembrane transport	1.81E-03
48	GO:0015979: photosynthesis	2.10E-03
49	GO:0009267: cellular response to starvation	2.24E-03
50	GO:0009913: epidermal cell differentiation	2.24E-03
51	GO:0000470: maturation of LSU-rRNA	2.24E-03
52	GO:1901657: glycosyl compound metabolic process	2.32E-03
53	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.69E-03
54	GO:0070370: cellular heat acclimation	3.16E-03
55	GO:0009645: response to low light intensity stimulus	3.16E-03
56	GO:0022904: respiratory electron transport chain	3.16E-03
57	GO:0030307: positive regulation of cell growth	3.16E-03
58	GO:0010103: stomatal complex morphogenesis	3.16E-03
59	GO:0010161: red light signaling pathway	3.16E-03
60	GO:0006353: DNA-templated transcription, termination	3.67E-03
61	GO:0030091: protein repair	3.67E-03
62	GO:0009704: de-etiolation	3.67E-03
63	GO:0009231: riboflavin biosynthetic process	3.67E-03
64	GO:0010928: regulation of auxin mediated signaling pathway	3.67E-03
65	GO:0005978: glycogen biosynthetic process	3.67E-03
66	GO:0000160: phosphorelay signal transduction system	4.01E-03
67	GO:0001558: regulation of cell growth	4.20E-03
68	GO:0006002: fructose 6-phosphate metabolic process	4.20E-03
69	GO:0009407: toxin catabolic process	4.21E-03
70	GO:0009631: cold acclimation	4.42E-03
71	GO:0051865: protein autoubiquitination	4.75E-03
72	GO:0006783: heme biosynthetic process	4.75E-03
73	GO:0042761: very long-chain fatty acid biosynthetic process	5.32E-03
74	GO:0005982: starch metabolic process	5.32E-03
75	GO:0006779: porphyrin-containing compound biosynthetic process	5.32E-03
76	GO:0048829: root cap development	5.93E-03
77	GO:0031627: telomeric loop formation	5.93E-03
78	GO:0009735: response to cytokinin	6.50E-03
79	GO:0043085: positive regulation of catalytic activity	6.55E-03
80	GO:0009750: response to fructose	6.55E-03
81	GO:0009644: response to high light intensity	6.74E-03
82	GO:0010582: floral meristem determinacy	7.20E-03
83	GO:0008361: regulation of cell size	7.20E-03
84	GO:0010102: lateral root morphogenesis	7.87E-03
85	GO:0010628: positive regulation of gene expression	7.87E-03
86	GO:0006006: glucose metabolic process	7.87E-03
87	GO:0018107: peptidyl-threonine phosphorylation	7.87E-03
88	GO:0009718: anthocyanin-containing compound biosynthetic process	7.87E-03
89	GO:0005986: sucrose biosynthetic process	7.87E-03
90	GO:0043086: negative regulation of catalytic activity	9.94E-03
91	GO:0010025: wax biosynthetic process	1.00E-02
92	GO:0045454: cell redox homeostasis	1.07E-02
93	GO:0009944: polarity specification of adaxial/abaxial axis	1.08E-02
94	GO:0007017: microtubule-based process	1.15E-02
95	GO:0009768: photosynthesis, light harvesting in photosystem I	1.15E-02
96	GO:0006825: copper ion transport	1.15E-02
97	GO:0051302: regulation of cell division	1.15E-02
98	GO:0003333: amino acid transmembrane transport	1.23E-02
99	GO:0019915: lipid storage	1.23E-02
100	GO:0061077: chaperone-mediated protein folding	1.23E-02
101	GO:0055114: oxidation-reduction process	1.24E-02
102	GO:0035428: hexose transmembrane transport	1.32E-02
103	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.32E-02
104	GO:0009686: gibberellin biosynthetic process	1.40E-02
105	GO:0006629: lipid metabolic process	1.40E-02
106	GO:0001944: vasculature development	1.40E-02
107	GO:0010089: xylem development	1.48E-02
108	GO:0042335: cuticle development	1.66E-02
109	GO:0006662: glycerol ether metabolic process	1.75E-02
110	GO:0046323: glucose import	1.75E-02
111	GO:0009646: response to absence of light	1.84E-02
112	GO:0048825: cotyledon development	1.94E-02
113	GO:0019252: starch biosynthetic process	1.94E-02
114	GO:0009414: response to water deprivation	2.08E-02
115	GO:0007623: circadian rhythm	2.08E-02
116	GO:0045490: pectin catabolic process	2.08E-02
117	GO:0048235: pollen sperm cell differentiation	2.13E-02
118	GO:0006979: response to oxidative stress	2.18E-02
119	GO:0030163: protein catabolic process	2.23E-02
120	GO:0009911: positive regulation of flower development	2.64E-02
121	GO:0009607: response to biotic stimulus	2.75E-02
122	GO:0009627: systemic acquired resistance	2.86E-02
123	GO:0016049: cell growth	3.08E-02
124	GO:0016311: dephosphorylation	3.08E-02
125	GO:0018298: protein-chromophore linkage	3.19E-02
126	GO:0010218: response to far red light	3.42E-02
127	GO:0009834: plant-type secondary cell wall biogenesis	3.42E-02
128	GO:0006970: response to osmotic stress	3.46E-02
129	GO:0009637: response to blue light	3.78E-02
130	GO:0034599: cellular response to oxidative stress	3.90E-02
131	GO:0080167: response to karrikin	3.98E-02
132	GO:0006631: fatty acid metabolic process	4.27E-02
133	GO:0010114: response to red light	4.52E-02
134	GO:0045892: negative regulation of transcription, DNA-templated	4.83E-02
135	GO:0009965: leaf morphogenesis	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0004567: beta-mannosidase activity	0.00E+00
2	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
3	GO:0004134: 4-alpha-glucanotransferase activity	0.00E+00
4	GO:0080082: esculin beta-glucosidase activity	0.00E+00
5	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
6	GO:0048039: ubiquinone binding	0.00E+00
7	GO:0009899: ent-kaurene synthase activity	0.00E+00
8	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
9	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
10	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
11	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
12	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
13	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
14	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	2.06E-04
15	GO:0008835: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity	2.06E-04
16	GO:0004853: uroporphyrinogen decarboxylase activity	2.06E-04
17	GO:0004645: phosphorylase activity	2.06E-04
18	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	2.06E-04
19	GO:0005227: calcium activated cation channel activity	2.06E-04
20	GO:0080079: cellobiose glucosidase activity	2.06E-04
21	GO:0008184: glycogen phosphorylase activity	2.06E-04
22	GO:0047372: acylglycerol lipase activity	4.23E-04
23	GO:0050736: O-malonyltransferase activity	4.62E-04
24	GO:0018708: thiol S-methyltransferase activity	4.62E-04
25	GO:0003844: 1,4-alpha-glucan branching enzyme activity	4.62E-04
26	GO:0016868: intramolecular transferase activity, phosphotransferases	4.62E-04
27	GO:0010297: heteropolysaccharide binding	4.62E-04
28	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	4.62E-04
29	GO:0045174: glutathione dehydrogenase (ascorbate) activity	7.52E-04
30	GO:0080054: low-affinity nitrate transmembrane transporter activity	7.52E-04
31	GO:0043169: cation binding	7.52E-04
32	GO:0017150: tRNA dihydrouridine synthase activity	7.52E-04
33	GO:0009055: electron carrier activity	7.61E-04
34	GO:0004364: glutathione transferase activity	7.86E-04
35	GO:0004857: enzyme inhibitor activity	8.52E-04
36	GO:0015203: polyamine transmembrane transporter activity	1.07E-03
37	GO:0016851: magnesium chelatase activity	1.07E-03
38	GO:0030570: pectate lyase activity	1.21E-03
39	GO:0019199: transmembrane receptor protein kinase activity	1.43E-03
40	GO:0042277: peptide binding	1.43E-03
41	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.43E-03
42	GO:0015035: protein disulfide oxidoreductase activity	1.93E-03
43	GO:0048038: quinone binding	2.04E-03
44	GO:2001070: starch binding	2.24E-03
45	GO:0004332: fructose-bisphosphate aldolase activity	2.24E-03
46	GO:0000156: phosphorelay response regulator activity	2.32E-03
47	GO:0019843: rRNA binding	2.47E-03
48	GO:0005261: cation channel activity	2.69E-03
49	GO:0004602: glutathione peroxidase activity	2.69E-03
50	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.69E-03
51	GO:0102483: scopolin beta-glucosidase activity	3.45E-03
52	GO:0004033: aldo-keto reductase (NADP) activity	3.67E-03
53	GO:0030674: protein binding, bridging	3.67E-03
54	GO:0005337: nucleoside transmembrane transporter activity	3.67E-03
55	GO:0005375: copper ion transmembrane transporter activity	4.20E-03
56	GO:0008422: beta-glucosidase activity	5.28E-03
57	GO:0015174: basic amino acid transmembrane transporter activity	5.32E-03
58	GO:0008047: enzyme activator activity	5.93E-03
59	GO:0044183: protein binding involved in protein folding	6.55E-03
60	GO:0003691: double-stranded telomeric DNA binding	6.55E-03
61	GO:0008378: galactosyltransferase activity	7.20E-03
62	GO:0004190: aspartic-type endopeptidase activity	9.27E-03
63	GO:0031409: pigment binding	1.00E-02
64	GO:0022891: substrate-specific transmembrane transporter activity	1.40E-02
65	GO:0047134: protein-disulfide reductase activity	1.57E-02
66	GO:0016829: lyase activity	1.63E-02
67	GO:0030170: pyridoxal phosphate binding	1.67E-02
68	GO:0005355: glucose transmembrane transporter activity	1.84E-02
69	GO:0004791: thioredoxin-disulfide reductase activity	1.84E-02
70	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.23E-02
71	GO:0005200: structural constituent of cytoskeleton	2.43E-02
72	GO:0008483: transaminase activity	2.43E-02
73	GO:0016168: chlorophyll binding	2.75E-02
74	GO:0008168: methyltransferase activity	3.10E-02
75	GO:0016491: oxidoreductase activity	3.23E-02
76	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.06E-02
77	GO:0051539: 4 iron, 4 sulfur cluster binding	4.15E-02
78	GO:0051537: 2 iron, 2 sulfur cluster binding	4.78E-02
79	GO:0043621: protein self-association	4.78E-02
80	GO:0015293: symporter activity	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
2	GO:0009507: chloroplast	1.07E-10
3	GO:0009570: chloroplast stroma	1.39E-08
4	GO:0009941: chloroplast envelope	2.50E-06
5	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	6.37E-06
6	GO:0009535: chloroplast thylakoid membrane	1.23E-05
7	GO:0009534: chloroplast thylakoid	2.16E-05
8	GO:0009501: amyloplast	1.73E-04
9	GO:0010287: plastoglobule	3.60E-04
10	GO:0010007: magnesium chelatase complex	7.52E-04
11	GO:0031931: TORC1 complex	7.52E-04
12	GO:0009579: thylakoid	2.50E-03
13	GO:0031305: integral component of mitochondrial inner membrane	3.67E-03
14	GO:0009538: photosystem I reaction center	3.67E-03
15	GO:0000783: nuclear telomere cap complex	4.20E-03
16	GO:0045298: tubulin complex	4.75E-03
17	GO:0031977: thylakoid lumen	5.75E-03
18	GO:0005740: mitochondrial envelope	5.93E-03
19	GO:0030095: chloroplast photosystem II	8.56E-03
20	GO:0030076: light-harvesting complex	9.27E-03
21	GO:0042651: thylakoid membrane	1.15E-02
22	GO:0009543: chloroplast thylakoid lumen	1.50E-02
23	GO:0009522: photosystem I	1.84E-02
24	GO:0009523: photosystem II	1.94E-02
25	GO:0005840: ribosome	2.31E-02
26	GO:0009295: nucleoid	2.43E-02
27	GO:0010319: stromule	2.43E-02
28	GO:0015934: large ribosomal subunit	3.54E-02
29	GO:0005874: microtubule	3.85E-02