GO Enrichment Analysis of Co-expressed Genes with
AT1G43560
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 3 | GO:0006412: translation | 4.72E-14 |
| 4 | GO:0032544: plastid translation | 4.08E-13 |
| 5 | GO:0042254: ribosome biogenesis | 2.72E-08 |
| 6 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.70E-06 |
| 7 | GO:0009409: response to cold | 1.84E-05 |
| 8 | GO:0043489: RNA stabilization | 3.77E-05 |
| 9 | GO:0051085: chaperone mediated protein folding requiring cofactor | 2.40E-04 |
| 10 | GO:0006241: CTP biosynthetic process | 2.40E-04 |
| 11 | GO:0006165: nucleoside diphosphate phosphorylation | 2.40E-04 |
| 12 | GO:0006228: UTP biosynthetic process | 2.40E-04 |
| 13 | GO:0010027: thylakoid membrane organization | 3.23E-04 |
| 14 | GO:0031122: cytoplasmic microtubule organization | 3.24E-04 |
| 15 | GO:0006546: glycine catabolic process | 3.24E-04 |
| 16 | GO:0006183: GTP biosynthetic process | 3.24E-04 |
| 17 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 5.07E-04 |
| 18 | GO:0015979: photosynthesis | 5.66E-04 |
| 19 | GO:0009955: adaxial/abaxial pattern specification | 6.05E-04 |
| 20 | GO:0042026: protein refolding | 6.05E-04 |
| 21 | GO:1901259: chloroplast rRNA processing | 6.05E-04 |
| 22 | GO:0010196: nonphotochemical quenching | 7.07E-04 |
| 23 | GO:0030091: protein repair | 8.13E-04 |
| 24 | GO:0000902: cell morphogenesis | 1.04E-03 |
| 25 | GO:0010215: cellulose microfibril organization | 1.28E-03 |
| 26 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.40E-03 |
| 27 | GO:0009790: embryo development | 1.81E-03 |
| 28 | GO:0010020: chloroplast fission | 1.81E-03 |
| 29 | GO:0019253: reductive pentose-phosphate cycle | 1.81E-03 |
| 30 | GO:0016114: terpenoid biosynthetic process | 2.56E-03 |
| 31 | GO:0061077: chaperone-mediated protein folding | 2.56E-03 |
| 32 | GO:0007005: mitochondrion organization | 2.72E-03 |
| 33 | GO:0009411: response to UV | 2.89E-03 |
| 34 | GO:0009658: chloroplast organization | 3.27E-03 |
| 35 | GO:0006979: response to oxidative stress | 3.88E-03 |
| 36 | GO:0080167: response to karrikin | 4.05E-03 |
| 37 | GO:0045454: cell redox homeostasis | 4.84E-03 |
| 38 | GO:0055114: oxidation-reduction process | 5.00E-03 |
| 39 | GO:0009627: systemic acquired resistance | 5.73E-03 |
| 40 | GO:0015995: chlorophyll biosynthetic process | 5.94E-03 |
| 41 | GO:0008219: cell death | 6.38E-03 |
| 42 | GO:0009817: defense response to fungus, incompatible interaction | 6.38E-03 |
| 43 | GO:0009631: cold acclimation | 7.05E-03 |
| 44 | GO:0045087: innate immune response | 7.51E-03 |
| 45 | GO:0009853: photorespiration | 7.51E-03 |
| 46 | GO:0042542: response to hydrogen peroxide | 8.71E-03 |
| 47 | GO:0009735: response to cytokinin | 9.66E-03 |
| 48 | GO:0009585: red, far-red light phototransduction | 1.11E-02 |
| 49 | GO:0006096: glycolytic process | 1.24E-02 |
| 50 | GO:0006396: RNA processing | 1.45E-02 |
| 51 | GO:0009451: RNA modification | 2.12E-02 |
| 52 | GO:0042742: defense response to bacterium | 2.15E-02 |
| 53 | GO:0009860: pollen tube growth | 3.01E-02 |
| 54 | GO:0006810: transport | 3.16E-02 |
| 55 | GO:0046686: response to cadmium ion | 3.35E-02 |
| 56 | GO:0006397: mRNA processing | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 2 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 3 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
| 4 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 5 | GO:0019843: rRNA binding | 4.20E-17 |
| 6 | GO:0003735: structural constituent of ribosome | 5.26E-14 |
| 7 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 8.75E-07 |
| 8 | GO:0051920: peroxiredoxin activity | 6.56E-06 |
| 9 | GO:0016209: antioxidant activity | 1.21E-05 |
| 10 | GO:0005528: FK506 binding | 8.25E-05 |
| 11 | GO:0004618: phosphoglycerate kinase activity | 9.40E-05 |
| 12 | GO:0004550: nucleoside diphosphate kinase activity | 2.40E-04 |
| 13 | GO:0043023: ribosomal large subunit binding | 2.40E-04 |
| 14 | GO:0004602: glutathione peroxidase activity | 6.05E-04 |
| 15 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 6.05E-04 |
| 16 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.83E-04 |
| 17 | GO:0051082: unfolded protein binding | 1.25E-03 |
| 18 | GO:0044183: protein binding involved in protein folding | 1.40E-03 |
| 19 | GO:0031072: heat shock protein binding | 1.67E-03 |
| 20 | GO:0008266: poly(U) RNA binding | 1.81E-03 |
| 21 | GO:0022891: substrate-specific transmembrane transporter activity | 2.89E-03 |
| 22 | GO:0004601: peroxidase activity | 3.27E-03 |
| 23 | GO:0050662: coenzyme binding | 3.76E-03 |
| 24 | GO:0008237: metallopeptidase activity | 4.90E-03 |
| 25 | GO:0016491: oxidoreductase activity | 5.45E-03 |
| 26 | GO:0016168: chlorophyll binding | 5.52E-03 |
| 27 | GO:0004222: metalloendopeptidase activity | 6.82E-03 |
| 28 | GO:0042803: protein homodimerization activity | 3.91E-02 |
| 29 | GO:0009055: electron carrier activity | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 4.54E-31 |
| 2 | GO:0009570: chloroplast stroma | 4.19E-25 |
| 3 | GO:0009941: chloroplast envelope | 2.19E-23 |
| 4 | GO:0009579: thylakoid | 8.55E-23 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 3.68E-15 |
| 6 | GO:0005840: ribosome | 3.53E-14 |
| 7 | GO:0009534: chloroplast thylakoid | 8.68E-11 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 2.25E-09 |
| 9 | GO:0005960: glycine cleavage complex | 8.75E-07 |
| 10 | GO:0010319: stromule | 8.13E-06 |
| 11 | GO:0031977: thylakoid lumen | 3.03E-05 |
| 12 | GO:0010287: plastoglobule | 1.20E-04 |
| 13 | GO:0009517: PSII associated light-harvesting complex II | 3.24E-04 |
| 14 | GO:0015934: large ribosomal subunit | 4.85E-04 |
| 15 | GO:0010005: cortical microtubule, transverse to long axis | 6.05E-04 |
| 16 | GO:0009533: chloroplast stromal thylakoid | 7.07E-04 |
| 17 | GO:0009538: photosystem I reaction center | 8.13E-04 |
| 18 | GO:0009536: plastid | 9.00E-04 |
| 19 | GO:0005763: mitochondrial small ribosomal subunit | 1.04E-03 |
| 20 | GO:0048046: apoplast | 1.04E-03 |
| 21 | GO:0016324: apical plasma membrane | 1.28E-03 |
| 22 | GO:0000311: plastid large ribosomal subunit | 1.53E-03 |
| 23 | GO:0000312: plastid small ribosomal subunit | 1.81E-03 |
| 24 | GO:0030095: chloroplast photosystem II | 1.81E-03 |
| 25 | GO:0009654: photosystem II oxygen evolving complex | 2.40E-03 |
| 26 | GO:0015935: small ribosomal subunit | 2.56E-03 |
| 27 | GO:0009523: photosystem II | 3.94E-03 |
| 28 | GO:0019898: extrinsic component of membrane | 3.94E-03 |
| 29 | GO:0031969: chloroplast membrane | 4.05E-03 |
| 30 | GO:0009295: nucleoid | 4.90E-03 |
| 31 | GO:0030529: intracellular ribonucleoprotein complex | 5.31E-03 |
| 32 | GO:0022626: cytosolic ribosome | 1.01E-02 |
| 33 | GO:0009706: chloroplast inner membrane | 1.42E-02 |
| 34 | GO:0016020: membrane | 1.63E-02 |
| 35 | GO:0022627: cytosolic small ribosomal subunit | 2.55E-02 |
| 36 | GO:0022625: cytosolic large ribosomal subunit | 3.45E-02 |