GO Enrichment Analysis of Co-expressed Genes with
AT1G35420
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:1904964: positive regulation of phytol biosynthetic process | 0.00E+00 |
2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
3 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
4 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
5 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
6 | GO:2000505: regulation of energy homeostasis | 0.00E+00 |
7 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
8 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
9 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
10 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
11 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
12 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
13 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
14 | GO:1904966: positive regulation of vitamin E biosynthetic process | 0.00E+00 |
15 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
16 | GO:0015979: photosynthesis | 7.45E-15 |
17 | GO:0090391: granum assembly | 2.68E-08 |
18 | GO:0018298: protein-chromophore linkage | 1.83E-07 |
19 | GO:0010027: thylakoid membrane organization | 2.43E-06 |
20 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.77E-06 |
21 | GO:0009642: response to light intensity | 7.06E-06 |
22 | GO:0006021: inositol biosynthetic process | 5.45E-05 |
23 | GO:0010207: photosystem II assembly | 5.99E-05 |
24 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.16E-04 |
25 | GO:0042549: photosystem II stabilization | 1.25E-04 |
26 | GO:0046855: inositol phosphate dephosphorylation | 1.25E-04 |
27 | GO:0010114: response to red light | 2.02E-04 |
28 | GO:0010196: nonphotochemical quenching | 2.24E-04 |
29 | GO:0048564: photosystem I assembly | 2.83E-04 |
30 | GO:0065002: intracellular protein transmembrane transport | 2.87E-04 |
31 | GO:0043686: co-translational protein modification | 2.87E-04 |
32 | GO:0043087: regulation of GTPase activity | 2.87E-04 |
33 | GO:0043007: maintenance of rDNA | 2.87E-04 |
34 | GO:0010028: xanthophyll cycle | 2.87E-04 |
35 | GO:0034337: RNA folding | 2.87E-04 |
36 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 2.87E-04 |
37 | GO:0000476: maturation of 4.5S rRNA | 2.87E-04 |
38 | GO:0009443: pyridoxal 5'-phosphate salvage | 2.87E-04 |
39 | GO:0000967: rRNA 5'-end processing | 2.87E-04 |
40 | GO:0043953: protein transport by the Tat complex | 2.87E-04 |
41 | GO:0071277: cellular response to calcium ion | 2.87E-04 |
42 | GO:0000481: maturation of 5S rRNA | 2.87E-04 |
43 | GO:0009657: plastid organization | 3.49E-04 |
44 | GO:0010206: photosystem II repair | 4.20E-04 |
45 | GO:0009658: chloroplast organization | 5.35E-04 |
46 | GO:0006729: tetrahydrobiopterin biosynthetic process | 6.30E-04 |
47 | GO:0034470: ncRNA processing | 6.30E-04 |
48 | GO:0006741: NADP biosynthetic process | 6.30E-04 |
49 | GO:0019752: carboxylic acid metabolic process | 6.30E-04 |
50 | GO:0006435: threonyl-tRNA aminoacylation | 6.30E-04 |
51 | GO:0030187: melatonin biosynthetic process | 6.30E-04 |
52 | GO:0006432: phenylalanyl-tRNA aminoacylation | 6.30E-04 |
53 | GO:0018026: peptidyl-lysine monomethylation | 6.30E-04 |
54 | GO:0000256: allantoin catabolic process | 6.30E-04 |
55 | GO:0009773: photosynthetic electron transport in photosystem I | 6.69E-04 |
56 | GO:0043085: positive regulation of catalytic activity | 6.69E-04 |
57 | GO:0015995: chlorophyll biosynthetic process | 7.09E-04 |
58 | GO:0016311: dephosphorylation | 7.57E-04 |
59 | GO:0006790: sulfur compound metabolic process | 7.66E-04 |
60 | GO:0055114: oxidation-reduction process | 9.92E-04 |
61 | GO:0071492: cellular response to UV-A | 1.02E-03 |
62 | GO:0005977: glycogen metabolic process | 1.02E-03 |
63 | GO:0019674: NAD metabolic process | 1.02E-03 |
64 | GO:0009405: pathogenesis | 1.02E-03 |
65 | GO:0010136: ureide catabolic process | 1.02E-03 |
66 | GO:0009637: response to blue light | 1.08E-03 |
67 | GO:0046854: phosphatidylinositol phosphorylation | 1.09E-03 |
68 | GO:0019853: L-ascorbic acid biosynthetic process | 1.09E-03 |
69 | GO:0034599: cellular response to oxidative stress | 1.14E-03 |
70 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 1.46E-03 |
71 | GO:2001141: regulation of RNA biosynthetic process | 1.46E-03 |
72 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.46E-03 |
73 | GO:0019363: pyridine nucleotide biosynthetic process | 1.46E-03 |
74 | GO:0006020: inositol metabolic process | 1.46E-03 |
75 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.46E-03 |
76 | GO:0006145: purine nucleobase catabolic process | 1.46E-03 |
77 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.46E-03 |
78 | GO:0042823: pyridoxal phosphate biosynthetic process | 1.46E-03 |
79 | GO:0046739: transport of virus in multicellular host | 1.46E-03 |
80 | GO:0009644: response to high light intensity | 1.64E-03 |
81 | GO:0055085: transmembrane transport | 1.81E-03 |
82 | GO:0010021: amylopectin biosynthetic process | 1.96E-03 |
83 | GO:0015976: carbon utilization | 1.96E-03 |
84 | GO:0071486: cellular response to high light intensity | 1.96E-03 |
85 | GO:0009765: photosynthesis, light harvesting | 1.96E-03 |
86 | GO:0006109: regulation of carbohydrate metabolic process | 1.96E-03 |
87 | GO:0015994: chlorophyll metabolic process | 1.96E-03 |
88 | GO:0031365: N-terminal protein amino acid modification | 2.50E-03 |
89 | GO:0016558: protein import into peroxisome matrix | 2.50E-03 |
90 | GO:0006564: L-serine biosynthetic process | 2.50E-03 |
91 | GO:0006662: glycerol ether metabolic process | 2.64E-03 |
92 | GO:0009793: embryo development ending in seed dormancy | 3.05E-03 |
93 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 3.08E-03 |
94 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 3.08E-03 |
95 | GO:0042793: transcription from plastid promoter | 3.08E-03 |
96 | GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | 3.08E-03 |
97 | GO:0080167: response to karrikin | 3.56E-03 |
98 | GO:0010189: vitamin E biosynthetic process | 3.71E-03 |
99 | GO:0071470: cellular response to osmotic stress | 3.71E-03 |
100 | GO:0009645: response to low light intensity stimulus | 4.38E-03 |
101 | GO:0009231: riboflavin biosynthetic process | 5.08E-03 |
102 | GO:0016559: peroxisome fission | 5.08E-03 |
103 | GO:0030091: protein repair | 5.08E-03 |
104 | GO:0009704: de-etiolation | 5.08E-03 |
105 | GO:0032508: DNA duplex unwinding | 5.08E-03 |
106 | GO:0017004: cytochrome complex assembly | 5.82E-03 |
107 | GO:0071482: cellular response to light stimulus | 5.82E-03 |
108 | GO:0032544: plastid translation | 5.82E-03 |
109 | GO:0006413: translational initiation | 6.23E-03 |
110 | GO:0098656: anion transmembrane transport | 6.60E-03 |
111 | GO:0009821: alkaloid biosynthetic process | 6.60E-03 |
112 | GO:0090333: regulation of stomatal closure | 6.60E-03 |
113 | GO:0010218: response to far red light | 6.77E-03 |
114 | GO:0007568: aging | 7.10E-03 |
115 | GO:0006949: syncytium formation | 8.26E-03 |
116 | GO:0019684: photosynthesis, light reaction | 9.14E-03 |
117 | GO:0009089: lysine biosynthetic process via diaminopimelate | 9.14E-03 |
118 | GO:0006415: translational termination | 9.14E-03 |
119 | GO:0006352: DNA-templated transcription, initiation | 9.14E-03 |
120 | GO:0006006: glucose metabolic process | 1.10E-02 |
121 | GO:0010020: chloroplast fission | 1.20E-02 |
122 | GO:0019253: reductive pentose-phosphate cycle | 1.20E-02 |
123 | GO:0006863: purine nucleobase transport | 1.40E-02 |
124 | GO:0006833: water transport | 1.40E-02 |
125 | GO:0080147: root hair cell development | 1.51E-02 |
126 | GO:0019953: sexual reproduction | 1.62E-02 |
127 | GO:0008299: isoprenoid biosynthetic process | 1.62E-02 |
128 | GO:0007017: microtubule-based process | 1.62E-02 |
129 | GO:0048511: rhythmic process | 1.73E-02 |
130 | GO:0019915: lipid storage | 1.73E-02 |
131 | GO:0009625: response to insect | 1.96E-02 |
132 | GO:0006012: galactose metabolic process | 1.96E-02 |
133 | GO:0045454: cell redox homeostasis | 1.96E-02 |
134 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.96E-02 |
135 | GO:0006396: RNA processing | 2.00E-02 |
136 | GO:0009561: megagametogenesis | 2.08E-02 |
137 | GO:0034220: ion transmembrane transport | 2.33E-02 |
138 | GO:0048868: pollen tube development | 2.46E-02 |
139 | GO:0042752: regulation of circadian rhythm | 2.59E-02 |
140 | GO:0019252: starch biosynthetic process | 2.72E-02 |
141 | GO:0008654: phospholipid biosynthetic process | 2.72E-02 |
142 | GO:0009791: post-embryonic development | 2.72E-02 |
143 | GO:0006810: transport | 2.78E-02 |
144 | GO:0006635: fatty acid beta-oxidation | 2.86E-02 |
145 | GO:0002229: defense response to oomycetes | 2.86E-02 |
146 | GO:0010193: response to ozone | 2.86E-02 |
147 | GO:0016032: viral process | 3.00E-02 |
148 | GO:0019761: glucosinolate biosynthetic process | 3.00E-02 |
149 | GO:0046686: response to cadmium ion | 3.06E-02 |
150 | GO:0009828: plant-type cell wall loosening | 3.28E-02 |
151 | GO:0009567: double fertilization forming a zygote and endosperm | 3.28E-02 |
152 | GO:0007623: circadian rhythm | 3.35E-02 |
153 | GO:0009627: systemic acquired resistance | 4.02E-02 |
154 | GO:0042128: nitrate assimilation | 4.02E-02 |
155 | GO:0009817: defense response to fungus, incompatible interaction | 4.49E-02 |
156 | GO:0009735: response to cytokinin | 4.65E-02 |
157 | GO:0009407: toxin catabolic process | 4.81E-02 |
158 | GO:0006811: ion transport | 4.81E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
2 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
3 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
4 | GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity | 0.00E+00 |
5 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
6 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
7 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
8 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
9 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
10 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
11 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
12 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
13 | GO:0042623: ATPase activity, coupled | 0.00E+00 |
14 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
15 | GO:0010276: phytol kinase activity | 0.00E+00 |
16 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
17 | GO:0003858: 3-hydroxybutyrate dehydrogenase activity | 0.00E+00 |
18 | GO:0016168: chlorophyll binding | 2.41E-09 |
19 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.77E-06 |
20 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.77E-06 |
21 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.77E-06 |
22 | GO:0022891: substrate-specific transmembrane transporter activity | 7.94E-06 |
23 | GO:0070402: NADPH binding | 1.35E-05 |
24 | GO:0043495: protein anchor | 5.45E-05 |
25 | GO:0031409: pigment binding | 8.51E-05 |
26 | GO:0004462: lactoylglutathione lyase activity | 1.25E-04 |
27 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.71E-04 |
28 | GO:0019899: enzyme binding | 2.24E-04 |
29 | GO:0004033: aldo-keto reductase (NADP) activity | 2.83E-04 |
30 | GO:0042736: NADH kinase activity | 2.87E-04 |
31 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 2.87E-04 |
32 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 2.87E-04 |
33 | GO:0010177: 2-(2'-methylthio)ethylmalate synthase activity | 2.87E-04 |
34 | GO:0042586: peptide deformylase activity | 2.87E-04 |
35 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 2.87E-04 |
36 | GO:0008047: enzyme activator activity | 5.80E-04 |
37 | GO:0047746: chlorophyllase activity | 6.30E-04 |
38 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 6.30E-04 |
39 | GO:0004617: phosphoglycerate dehydrogenase activity | 6.30E-04 |
40 | GO:0004826: phenylalanine-tRNA ligase activity | 6.30E-04 |
41 | GO:0004829: threonine-tRNA ligase activity | 6.30E-04 |
42 | GO:0019172: glyoxalase III activity | 6.30E-04 |
43 | GO:0019156: isoamylase activity | 6.30E-04 |
44 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 6.30E-04 |
45 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 6.30E-04 |
46 | GO:0031072: heat shock protein binding | 8.67E-04 |
47 | GO:0030267: glyoxylate reductase (NADP) activity | 1.02E-03 |
48 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 1.02E-03 |
49 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.02E-03 |
50 | GO:0004751: ribose-5-phosphate isomerase activity | 1.02E-03 |
51 | GO:0005528: FK506 binding | 1.34E-03 |
52 | GO:0004792: thiosulfate sulfurtransferase activity | 1.46E-03 |
53 | GO:0016851: magnesium chelatase activity | 1.46E-03 |
54 | GO:0016149: translation release factor activity, codon specific | 1.46E-03 |
55 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.81E-03 |
56 | GO:0051287: NAD binding | 1.89E-03 |
57 | GO:0016279: protein-lysine N-methyltransferase activity | 1.96E-03 |
58 | GO:0001053: plastid sigma factor activity | 1.96E-03 |
59 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.96E-03 |
60 | GO:0008453: alanine-glyoxylate transaminase activity | 1.96E-03 |
61 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.96E-03 |
62 | GO:0016987: sigma factor activity | 1.96E-03 |
63 | GO:0047134: protein-disulfide reductase activity | 2.27E-03 |
64 | GO:0004791: thioredoxin-disulfide reductase activity | 2.84E-03 |
65 | GO:0016853: isomerase activity | 2.84E-03 |
66 | GO:0004605: phosphatidate cytidylyltransferase activity | 3.08E-03 |
67 | GO:0000293: ferric-chelate reductase activity | 3.08E-03 |
68 | GO:0004556: alpha-amylase activity | 3.08E-03 |
69 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.71E-03 |
70 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 3.71E-03 |
71 | GO:0004017: adenylate kinase activity | 3.71E-03 |
72 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.71E-03 |
73 | GO:0019843: rRNA binding | 4.52E-03 |
74 | GO:0008135: translation factor activity, RNA binding | 5.82E-03 |
75 | GO:0003951: NAD+ kinase activity | 5.82E-03 |
76 | GO:0003747: translation release factor activity | 6.60E-03 |
77 | GO:0016844: strictosidine synthase activity | 7.41E-03 |
78 | GO:0003746: translation elongation factor activity | 7.78E-03 |
79 | GO:0003993: acid phosphatase activity | 8.14E-03 |
80 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 9.14E-03 |
81 | GO:0042802: identical protein binding | 9.25E-03 |
82 | GO:0000049: tRNA binding | 1.01E-02 |
83 | GO:0004089: carbonate dehydratase activity | 1.10E-02 |
84 | GO:0008081: phosphoric diester hydrolase activity | 1.10E-02 |
85 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.10E-02 |
86 | GO:0005198: structural molecule activity | 1.13E-02 |
87 | GO:0046872: metal ion binding | 1.49E-02 |
88 | GO:0004857: enzyme inhibitor activity | 1.51E-02 |
89 | GO:0031625: ubiquitin protein ligase binding | 1.51E-02 |
90 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.62E-02 |
91 | GO:0004176: ATP-dependent peptidase activity | 1.73E-02 |
92 | GO:0051082: unfolded protein binding | 1.94E-02 |
93 | GO:0015035: protein disulfide oxidoreductase activity | 2.00E-02 |
94 | GO:0003727: single-stranded RNA binding | 2.08E-02 |
95 | GO:0008514: organic anion transmembrane transporter activity | 2.08E-02 |
96 | GO:0003756: protein disulfide isomerase activity | 2.08E-02 |
97 | GO:0016491: oxidoreductase activity | 2.31E-02 |
98 | GO:0008080: N-acetyltransferase activity | 2.46E-02 |
99 | GO:0003924: GTPase activity | 2.56E-02 |
100 | GO:0048038: quinone binding | 2.86E-02 |
101 | GO:0016597: amino acid binding | 3.57E-02 |
102 | GO:0015250: water channel activity | 3.72E-02 |
103 | GO:0003743: translation initiation factor activity | 3.91E-02 |
104 | GO:0005096: GTPase activator activity | 4.65E-02 |
105 | GO:0030145: manganese ion binding | 4.97E-02 |
106 | GO:0050897: cobalt ion binding | 4.97E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0009349: riboflavin synthase complex | 0.00E+00 |
2 | GO:0043235: receptor complex | 0.00E+00 |
3 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
4 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
5 | GO:0009507: chloroplast | 4.90E-63 |
6 | GO:0009535: chloroplast thylakoid membrane | 1.25E-43 |
7 | GO:0009534: chloroplast thylakoid | 2.55E-30 |
8 | GO:0009570: chloroplast stroma | 1.89E-22 |
9 | GO:0009941: chloroplast envelope | 3.71E-16 |
10 | GO:0009543: chloroplast thylakoid lumen | 2.52E-15 |
11 | GO:0009579: thylakoid | 7.45E-13 |
12 | GO:0009523: photosystem II | 3.50E-10 |
13 | GO:0031977: thylakoid lumen | 2.52E-08 |
14 | GO:0010287: plastoglobule | 6.67E-07 |
15 | GO:0030095: chloroplast photosystem II | 1.60E-06 |
16 | GO:0009538: photosystem I reaction center | 7.06E-06 |
17 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.42E-05 |
18 | GO:0009654: photosystem II oxygen evolving complex | 1.16E-04 |
19 | GO:0031361: integral component of thylakoid membrane | 2.87E-04 |
20 | GO:0009782: photosystem I antenna complex | 2.87E-04 |
21 | GO:0019898: extrinsic component of membrane | 3.27E-04 |
22 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 6.30E-04 |
23 | GO:0009508: plastid chromosome | 8.67E-04 |
24 | GO:0010007: magnesium chelatase complex | 1.02E-03 |
25 | GO:0033281: TAT protein transport complex | 1.02E-03 |
26 | GO:0030076: light-harvesting complex | 1.09E-03 |
27 | GO:0042651: thylakoid membrane | 1.47E-03 |
28 | GO:0030286: dynein complex | 1.96E-03 |
29 | GO:0009522: photosystem I | 2.84E-03 |
30 | GO:0009295: nucleoid | 4.19E-03 |
31 | GO:0005759: mitochondrial matrix | 6.05E-03 |
32 | GO:0012511: monolayer-surrounded lipid storage body | 9.14E-03 |
33 | GO:0032040: small-subunit processome | 1.01E-02 |
34 | GO:0009574: preprophase band | 1.10E-02 |
35 | GO:0031969: chloroplast membrane | 1.56E-02 |
36 | GO:0016020: membrane | 1.70E-02 |
37 | GO:0009706: chloroplast inner membrane | 1.94E-02 |
38 | GO:0005623: cell | 2.49E-02 |
39 | GO:0005778: peroxisomal membrane | 3.42E-02 |
40 | GO:0030529: intracellular ribonucleoprotein complex | 3.72E-02 |
41 | GO:0009707: chloroplast outer membrane | 4.49E-02 |
42 | GO:0005840: ribosome | 4.63E-02 |
43 | GO:0015934: large ribosomal subunit | 4.97E-02 |