co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G34370

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
2	GO:2001142: nicotinate transport	0.00E+00
3	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
4	GO:0032499: detection of peptidoglycan	0.00E+00
5	GO:2001143: N-methylnicotinate transport	0.00E+00
6	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
7	GO:0010372: positive regulation of gibberellin biosynthetic process	6.64E-07
8	GO:0009225: nucleotide-sugar metabolic process	8.90E-06
9	GO:0033358: UDP-L-arabinose biosynthetic process	1.12E-05
10	GO:0045227: capsule polysaccharide biosynthetic process	1.12E-05
11	GO:0006468: protein phosphorylation	1.20E-05
12	GO:0002229: defense response to oomycetes	5.65E-05
13	GO:0006402: mRNA catabolic process	6.94E-05
14	GO:0009699: phenylpropanoid biosynthetic process	8.78E-05
15	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.14E-04
16	GO:0010482: regulation of epidermal cell division	1.14E-04
17	GO:0080157: regulation of plant-type cell wall organization or biogenesis	1.14E-04
18	GO:0032491: detection of molecule of fungal origin	1.14E-04
19	GO:1900384: regulation of flavonol biosynthetic process	1.14E-04
20	GO:0046475: glycerophospholipid catabolic process	2.65E-04
21	GO:0046939: nucleotide phosphorylation	2.65E-04
22	GO:0010155: regulation of proton transport	2.65E-04
23	GO:0034605: cellular response to heat	2.74E-04
24	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	4.38E-04
25	GO:0010366: negative regulation of ethylene biosynthetic process	4.38E-04
26	GO:0006012: galactose metabolic process	5.51E-04
27	GO:0009306: protein secretion	5.99E-04
28	GO:0030100: regulation of endocytosis	6.29E-04
29	GO:0002679: respiratory burst involved in defense response	6.29E-04
30	GO:0033014: tetrapyrrole biosynthetic process	6.29E-04
31	GO:0071323: cellular response to chitin	6.29E-04
32	GO:0046836: glycolipid transport	6.29E-04
33	GO:0051567: histone H3-K9 methylation	8.35E-04
34	GO:0030007: cellular potassium ion homeostasis	8.35E-04
35	GO:0030104: water homeostasis	8.35E-04
36	GO:0071219: cellular response to molecule of bacterial origin	8.35E-04
37	GO:0015743: malate transport	8.35E-04
38	GO:0033320: UDP-D-xylose biosynthetic process	8.35E-04
39	GO:0031047: gene silencing by RNA	9.77E-04
40	GO:0043484: regulation of RNA splicing	1.05E-03
41	GO:0030041: actin filament polymerization	1.05E-03
42	GO:0042732: D-xylose metabolic process	1.29E-03
43	GO:0048317: seed morphogenesis	1.29E-03
44	GO:1900425: negative regulation of defense response to bacterium	1.29E-03
45	GO:0033365: protein localization to organelle	1.29E-03
46	GO:0010337: regulation of salicylic acid metabolic process	1.29E-03
47	GO:0042742: defense response to bacterium	1.45E-03
48	GO:0030643: cellular phosphate ion homeostasis	1.54E-03
49	GO:0008219: cell death	1.69E-03
50	GO:0006744: ubiquinone biosynthetic process	1.81E-03
51	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.81E-03
52	GO:0006955: immune response	1.81E-03
53	GO:1900150: regulation of defense response to fungus	2.09E-03
54	GO:0045010: actin nucleation	2.09E-03
55	GO:0009808: lignin metabolic process	2.39E-03
56	GO:0051865: protein autoubiquitination	2.70E-03
57	GO:0090333: regulation of stomatal closure	2.70E-03
58	GO:0006783: heme biosynthetic process	2.70E-03
59	GO:0009835: fruit ripening	2.70E-03
60	GO:0006779: porphyrin-containing compound biosynthetic process	3.02E-03
61	GO:0008202: steroid metabolic process	3.02E-03
62	GO:0010200: response to chitin	3.09E-03
63	GO:0046777: protein autophosphorylation	3.22E-03
64	GO:0006782: protoporphyrinogen IX biosynthetic process	3.36E-03
65	GO:0007064: mitotic sister chromatid cohesion	3.36E-03
66	GO:0009688: abscisic acid biosynthetic process	3.36E-03
67	GO:0009698: phenylpropanoid metabolic process	3.71E-03
68	GO:1903507: negative regulation of nucleic acid-templated transcription	3.71E-03
69	GO:0048765: root hair cell differentiation	3.71E-03
70	GO:0010105: negative regulation of ethylene-activated signaling pathway	4.06E-03
71	GO:0000266: mitochondrial fission	4.06E-03
72	GO:0070588: calcium ion transmembrane transport	5.21E-03
73	GO:0046854: phosphatidylinositol phosphorylation	5.21E-03
74	GO:0009742: brassinosteroid mediated signaling pathway	5.53E-03
75	GO:0006071: glycerol metabolic process	5.61E-03
76	GO:0009863: salicylic acid mediated signaling pathway	6.03E-03
77	GO:0006979: response to oxidative stress	6.18E-03
78	GO:0010026: trichome differentiation	6.45E-03
79	GO:0043622: cortical microtubule organization	6.45E-03
80	GO:0016310: phosphorylation	6.98E-03
81	GO:2000022: regulation of jasmonic acid mediated signaling pathway	7.34E-03
82	GO:0009693: ethylene biosynthetic process	7.79E-03
83	GO:0071215: cellular response to abscisic acid stimulus	7.79E-03
84	GO:0009686: gibberellin biosynthetic process	7.79E-03
85	GO:0040007: growth	7.79E-03
86	GO:0006817: phosphate ion transport	8.26E-03
87	GO:0042631: cellular response to water deprivation	9.23E-03
88	GO:0006606: protein import into nucleus	9.23E-03
89	GO:0009960: endosperm development	9.73E-03
90	GO:0006885: regulation of pH	9.73E-03
91	GO:0048868: pollen tube development	9.73E-03
92	GO:0006952: defense response	9.76E-03
93	GO:0048544: recognition of pollen	1.02E-02
94	GO:0007166: cell surface receptor signaling pathway	1.03E-02
95	GO:0009611: response to wounding	1.03E-02
96	GO:0006623: protein targeting to vacuole	1.08E-02
97	GO:0035556: intracellular signal transduction	1.08E-02
98	GO:0009851: auxin biosynthetic process	1.08E-02
99	GO:0032502: developmental process	1.18E-02
100	GO:0046686: response to cadmium ion	1.19E-02
101	GO:0009651: response to salt stress	1.20E-02
102	GO:1901657: glycosyl compound metabolic process	1.24E-02
103	GO:0001666: response to hypoxia	1.46E-02
104	GO:0009615: response to virus	1.46E-02
105	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.52E-02
106	GO:0015995: chlorophyll biosynthetic process	1.64E-02
107	GO:0048573: photoperiodism, flowering	1.64E-02
108	GO:0016049: cell growth	1.70E-02
109	GO:0080167: response to karrikin	1.74E-02
110	GO:0009817: defense response to fungus, incompatible interaction	1.77E-02
111	GO:0010311: lateral root formation	1.83E-02
112	GO:0009867: jasmonic acid mediated signaling pathway	2.09E-02
113	GO:0045087: innate immune response	2.09E-02
114	GO:0006869: lipid transport	2.28E-02
115	GO:0006839: mitochondrial transport	2.29E-02
116	GO:0006897: endocytosis	2.36E-02
117	GO:0051707: response to other organism	2.50E-02
118	GO:0006397: mRNA processing	2.67E-02
119	GO:0009636: response to toxic substance	2.72E-02
120	GO:0009753: response to jasmonic acid	2.75E-02
121	GO:0008152: metabolic process	2.83E-02
122	GO:0031347: regulation of defense response	2.87E-02
123	GO:0006812: cation transport	2.94E-02
124	GO:0006813: potassium ion transport	3.09E-02
125	GO:0016567: protein ubiquitination	3.23E-02
126	GO:0009626: plant-type hypersensitive response	3.65E-02
127	GO:0009620: response to fungus	3.73E-02
128	GO:0016569: covalent chromatin modification	3.81E-02
129	GO:0042545: cell wall modification	3.89E-02
130	GO:0009555: pollen development	4.53E-02
131	GO:0009058: biosynthetic process	4.84E-02
132	GO:0009845: seed germination	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0016710: trans-cinnamate 4-monooxygenase activity	0.00E+00
2	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
3	GO:0010293: abscisic aldehyde oxidase activity	0.00E+00
4	GO:2001080: chitosan binding	0.00E+00
5	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
6	GO:0090416: nicotinate transporter activity	0.00E+00
7	GO:0016301: kinase activity	1.36E-07
8	GO:0004674: protein serine/threonine kinase activity	1.33E-06
9	GO:0005524: ATP binding	5.69E-06
10	GO:0050373: UDP-arabinose 4-epimerase activity	1.12E-05
11	GO:0003978: UDP-glucose 4-epimerase activity	3.95E-05
12	GO:0004672: protein kinase activity	1.59E-04
13	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.79E-04
14	GO:0008883: glutamyl-tRNA reductase activity	2.65E-04
15	GO:0019201: nucleotide kinase activity	6.29E-04
16	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	6.29E-04
17	GO:0017089: glycolipid transporter activity	6.29E-04
18	GO:0019199: transmembrane receptor protein kinase activity	8.35E-04
19	GO:0004031: aldehyde oxidase activity	8.35E-04
20	GO:0050302: indole-3-acetaldehyde oxidase activity	8.35E-04
21	GO:0005253: anion channel activity	8.35E-04
22	GO:0051861: glycolipid binding	8.35E-04
23	GO:0004518: nuclease activity	9.77E-04
24	GO:0047631: ADP-ribose diphosphatase activity	1.05E-03
25	GO:0002020: protease binding	1.05E-03
26	GO:0048040: UDP-glucuronate decarboxylase activity	1.29E-03
27	GO:0004017: adenylate kinase activity	1.54E-03
28	GO:0070403: NAD+ binding	1.54E-03
29	GO:0015140: malate transmembrane transporter activity	1.81E-03
30	GO:0004143: diacylglycerol kinase activity	1.81E-03
31	GO:0102425: myricetin 3-O-glucosyltransferase activity	1.81E-03
32	GO:0102360: daphnetin 3-O-glucosyltransferase activity	1.81E-03
33	GO:0047893: flavonol 3-O-glucosyltransferase activity	2.09E-03
34	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.09E-03
35	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	2.09E-03
36	GO:0004430: 1-phosphatidylinositol 4-kinase activity	2.39E-03
37	GO:0003951: NAD+ kinase activity	2.39E-03
38	GO:0008142: oxysterol binding	2.39E-03
39	GO:0016207: 4-coumarate-CoA ligase activity	2.70E-03
40	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.70E-03
41	GO:0050660: flavin adenine dinucleotide binding	2.71E-03
42	GO:0047617: acyl-CoA hydrolase activity	3.02E-03
43	GO:0005388: calcium-transporting ATPase activity	4.43E-03
44	GO:0008139: nuclear localization sequence binding	4.43E-03
45	GO:0019888: protein phosphatase regulator activity	4.43E-03
46	GO:0008061: chitin binding	5.21E-03
47	GO:0009055: electron carrier activity	5.30E-03
48	GO:0003714: transcription corepressor activity	6.03E-03
49	GO:0035251: UDP-glucosyltransferase activity	6.89E-03
50	GO:0033612: receptor serine/threonine kinase binding	6.89E-03
51	GO:0022891: substrate-specific transmembrane transporter activity	7.79E-03
52	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.39E-03
53	GO:0005451: monovalent cation:proton antiporter activity	9.23E-03
54	GO:0008536: Ran GTPase binding	9.73E-03
55	GO:0004842: ubiquitin-protein transferase activity	9.97E-03
56	GO:0015299: solute:proton antiporter activity	1.02E-02
57	GO:0016853: isomerase activity	1.02E-02
58	GO:0015385: sodium:proton antiporter activity	1.24E-02
59	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.35E-02
60	GO:0030246: carbohydrate binding	1.47E-02
61	GO:0008375: acetylglucosaminyltransferase activity	1.58E-02
62	GO:0102483: scopolin beta-glucosidase activity	1.64E-02
63	GO:0030247: polysaccharide binding	1.64E-02
64	GO:0008422: beta-glucosidase activity	2.22E-02
65	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.22E-02
66	GO:0004722: protein serine/threonine phosphatase activity	2.28E-02
67	GO:0050661: NADP binding	2.29E-02
68	GO:0035091: phosphatidylinositol binding	2.65E-02
69	GO:0051537: 2 iron, 2 sulfur cluster binding	2.65E-02
70	GO:0003824: catalytic activity	2.76E-02
71	GO:0031625: ubiquitin protein ligase binding	3.33E-02
72	GO:0045330: aspartyl esterase activity	3.33E-02
73	GO:0008289: lipid binding	3.56E-02
74	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.73E-02
75	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.73E-02
76	GO:0016757: transferase activity, transferring glycosyl groups	3.80E-02
77	GO:0016874: ligase activity	3.81E-02
78	GO:0030599: pectinesterase activity	3.81E-02
79	GO:0022857: transmembrane transporter activity	3.81E-02
80	GO:0003779: actin binding	3.89E-02
81	GO:0003729: mRNA binding	4.01E-02
82	GO:0016758: transferase activity, transferring hexosyl groups	4.58E-02
83	GO:0003676: nucleic acid binding	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0016442: RISC complex	0.00E+00
2	GO:0005886: plasma membrane	4.32E-08
3	GO:0032580: Golgi cisterna membrane	7.58E-05
4	GO:0010494: cytoplasmic stress granule	1.08E-04
5	GO:0048471: perinuclear region of cytoplasm	1.82E-04
6	GO:0017053: transcriptional repressor complex	4.38E-04
7	GO:0000932: P-body	1.30E-03
8	GO:0016363: nuclear matrix	1.54E-03
9	GO:0009505: plant-type cell wall	2.15E-03
10	GO:0000159: protein phosphatase type 2A complex	3.71E-03
11	GO:0090404: pollen tube tip	3.71E-03
12	GO:0005635: nuclear envelope	3.93E-03
13	GO:0016021: integral component of membrane	5.35E-03
14	GO:0043234: protein complex	5.61E-03
15	GO:0005875: microtubule associated complex	5.61E-03
16	GO:0005741: mitochondrial outer membrane	6.89E-03
17	GO:0031965: nuclear membrane	1.08E-02
18	GO:0005788: endoplasmic reticulum lumen	1.52E-02
19	GO:0005618: cell wall	1.60E-02
20	GO:0019005: SCF ubiquitin ligase complex	1.77E-02
21	GO:0005768: endosome	2.15E-02
22	GO:0090406: pollen tube	2.50E-02
23	GO:0005829: cytosol	2.81E-02
24	GO:0043231: intracellular membrane-bounded organelle	2.83E-02
25	GO:0010008: endosome membrane	3.57E-02
26	GO:0012505: endomembrane system	3.89E-02
27	GO:0005774: vacuolar membrane	3.90E-02
28	GO:0005783: endoplasmic reticulum	4.12E-02
29	GO:0005623: cell	4.75E-02
30	GO:0009524: phragmoplast	4.84E-02
31	GO:0009506: plasmodesma	4.96E-02