Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G33140

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0007530: sex determination0.00E+00
2GO:1990569: UDP-N-acetylglucosamine transmembrane transport0.00E+00
3GO:0015789: UDP-N-acetylgalactosamine transport0.00E+00
4GO:0000740: nuclear membrane fusion0.00E+00
5GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process0.00E+00
6GO:0044843: cell cycle G1/S phase transition0.00E+00
7GO:1903857: negative regulation of cytokinin dehydrogenase activity0.00E+00
8GO:0032211: negative regulation of telomere maintenance via telomerase0.00E+00
9GO:0006412: translation2.35E-159
10GO:0042254: ribosome biogenesis6.45E-57
11GO:0000027: ribosomal large subunit assembly2.15E-13
12GO:0000028: ribosomal small subunit assembly1.23E-08
13GO:0006626: protein targeting to mitochondrion4.34E-07
14GO:0000398: mRNA splicing, via spliceosome3.02E-06
15GO:0000387: spliceosomal snRNP assembly4.11E-06
16GO:0045041: protein import into mitochondrial intermembrane space1.71E-05
17GO:0009735: response to cytokinin1.74E-05
18GO:1902626: assembly of large subunit precursor of preribosome5.65E-05
19GO:0006414: translational elongation1.22E-04
20GO:0006511: ubiquitin-dependent protein catabolic process3.12E-04
21GO:0043248: proteasome assembly4.27E-04
22GO:0009651: response to salt stress4.64E-04
23GO:0030150: protein import into mitochondrial matrix5.00E-04
24GO:0042026: protein refolding5.67E-04
25GO:0006458: 'de novo' protein folding5.67E-04
26GO:0009955: adaxial/abaxial pattern specification5.67E-04
27GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)6.31E-04
28GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)6.31E-04
29GO:0018002: N-terminal peptidyl-glutamic acid acetylation6.31E-04
30GO:0006407: rRNA export from nucleus6.31E-04
31GO:1990258: histone glutamine methylation6.31E-04
32GO:0006475: internal protein amino acid acetylation6.31E-04
33GO:0015801: aromatic amino acid transport6.31E-04
34GO:0017198: N-terminal peptidyl-serine acetylation6.31E-04
35GO:0030490: maturation of SSU-rRNA6.31E-04
36GO:2001006: regulation of cellulose biosynthetic process6.31E-04
37GO:0000494: box C/D snoRNA 3'-end processing6.31E-04
38GO:0061077: chaperone-mediated protein folding6.44E-04
39GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c7.25E-04
40GO:0046686: response to cadmium ion1.32E-03
41GO:0055129: L-proline biosynthetic process1.36E-03
42GO:0006452: translational frameshifting1.36E-03
43GO:0010198: synergid death1.36E-03
44GO:0051788: response to misfolded protein1.36E-03
45GO:0015786: UDP-glucose transport1.36E-03
46GO:0045905: positive regulation of translational termination1.36E-03
47GO:0071668: plant-type cell wall assembly1.36E-03
48GO:0009156: ribonucleoside monophosphate biosynthetic process1.36E-03
49GO:0045901: positive regulation of translational elongation1.36E-03
50GO:0048569: post-embryonic animal organ development1.36E-03
51GO:0006913: nucleocytoplasmic transport2.10E-03
52GO:0051603: proteolysis involved in cellular protein catabolic process2.14E-03
53GO:0006954: inflammatory response2.24E-03
54GO:0002181: cytoplasmic translation2.24E-03
55GO:0045793: positive regulation of cell size2.24E-03
56GO:0015783: GDP-fucose transport2.24E-03
57GO:0034227: tRNA thio-modification2.24E-03
58GO:0042256: mature ribosome assembly2.24E-03
59GO:0090506: axillary shoot meristem initiation2.24E-03
60GO:0006820: anion transport2.41E-03
61GO:0006241: CTP biosynthetic process3.25E-03
62GO:0072334: UDP-galactose transmembrane transport3.25E-03
63GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity3.25E-03
64GO:0009647: skotomorphogenesis3.25E-03
65GO:0006165: nucleoside diphosphate phosphorylation3.25E-03
66GO:0006228: UTP biosynthetic process3.25E-03
67GO:0006164: purine nucleotide biosynthetic process3.25E-03
68GO:0006168: adenine salvage3.25E-03
69GO:0009558: embryo sac cellularization3.25E-03
70GO:0032877: positive regulation of DNA endoreduplication3.25E-03
71GO:0046836: glycolipid transport3.25E-03
72GO:0006166: purine ribonucleoside salvage3.25E-03
73GO:0070301: cellular response to hydrogen peroxide3.25E-03
74GO:0051085: chaperone mediated protein folding requiring cofactor3.25E-03
75GO:0006487: protein N-linked glycosylation4.30E-03
76GO:0009116: nucleoside metabolic process4.30E-03
77GO:0006183: GTP biosynthetic process4.38E-03
78GO:0010363: regulation of plant-type hypersensitive response4.38E-03
79GO:2000032: regulation of secondary shoot formation4.38E-03
80GO:0009165: nucleotide biosynthetic process4.38E-03
81GO:0051781: positive regulation of cell division4.38E-03
82GO:0042274: ribosomal small subunit biogenesis4.38E-03
83GO:0071493: cellular response to UV-B5.63E-03
84GO:0031167: rRNA methylation5.63E-03
85GO:0007029: endoplasmic reticulum organization5.63E-03
86GO:1902183: regulation of shoot apical meristem development5.63E-03
87GO:0044209: AMP salvage5.63E-03
88GO:0045040: protein import into mitochondrial outer membrane6.99E-03
89GO:0006561: proline biosynthetic process6.99E-03
90GO:0016070: RNA metabolic process6.99E-03
91GO:0000470: maturation of LSU-rRNA6.99E-03
92GO:0006413: translational initiation7.23E-03
93GO:0009965: leaf morphogenesis7.79E-03
94GO:0000413: protein peptidyl-prolyl isomerization7.99E-03
95GO:0006606: protein import into nucleus7.99E-03
96GO:1901001: negative regulation of response to salt stress8.45E-03
97GO:0000911: cytokinesis by cell plate formation8.45E-03
98GO:0009612: response to mechanical stimulus8.45E-03
99GO:0000054: ribosomal subunit export from nucleus8.45E-03
100GO:0000245: spliceosomal complex assembly8.45E-03
101GO:0009554: megasporogenesis8.45E-03
102GO:0009793: embryo development ending in seed dormancy9.76E-03
103GO:0006364: rRNA processing9.83E-03
104GO:0032880: regulation of protein localization1.00E-02
105GO:0048528: post-embryonic root development1.00E-02
106GO:0080156: mitochondrial mRNA modification1.07E-02
107GO:0009690: cytokinin metabolic process1.17E-02
108GO:0050821: protein stabilization1.17E-02
109GO:0031540: regulation of anthocyanin biosynthetic process1.17E-02
110GO:0030163: protein catabolic process1.22E-02
111GO:0001558: regulation of cell growth1.34E-02
112GO:0001510: RNA methylation1.34E-02
113GO:0009808: lignin metabolic process1.34E-02
114GO:0009245: lipid A biosynthetic process1.53E-02
115GO:0006189: 'de novo' IMP biosynthetic process1.53E-02
116GO:0048589: developmental growth1.53E-02
117GO:0015780: nucleotide-sugar transport1.53E-02
118GO:0098656: anion transmembrane transport1.53E-02
119GO:0046685: response to arsenic-containing substance1.53E-02
120GO:0043069: negative regulation of programmed cell death1.92E-02
121GO:0015770: sucrose transport2.13E-02
122GO:0010015: root morphogenesis2.13E-02
123GO:0016925: protein sumoylation2.34E-02
124GO:0010043: response to zinc ion2.35E-02
125GO:0010102: lateral root morphogenesis2.57E-02
126GO:0010628: positive regulation of gene expression2.57E-02
127GO:0048467: gynoecium development2.80E-02
128GO:0006446: regulation of translational initiation2.80E-02
129GO:0008283: cell proliferation3.33E-02
130GO:0009926: auxin polar transport3.33E-02
131GO:0006406: mRNA export from nucleus3.53E-02
132GO:0006289: nucleotide-excision repair3.53E-02
133GO:0009644: response to high light intensity3.60E-02
134GO:0051302: regulation of cell division3.79E-02
135GO:0009408: response to heat3.82E-02
136GO:0008380: RNA splicing3.83E-02
137GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.02E-02
138GO:0003333: amino acid transmembrane transport4.05E-02
139GO:0015992: proton transport4.05E-02
140GO:0051260: protein homooligomerization4.05E-02
141GO:0010431: seed maturation4.05E-02
142GO:0007005: mitochondrion organization4.32E-02
143GO:0040007: growth4.60E-02
144GO:0010584: pollen exine formation4.88E-02
145GO:0019722: calcium-mediated signaling4.88E-02
146GO:0010089: xylem development4.88E-02
RankGO TermAdjusted P value
1GO:0004735: pyrroline-5-carboxylate reductase activity0.00E+00
2GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity0.00E+00
3GO:0052873: FMN reductase (NADPH) activity0.00E+00
4GO:0008752: FMN reductase activity0.00E+00
5GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity0.00E+00
6GO:0003735: structural constituent of ribosome1.19E-197
7GO:0003729: mRNA binding3.29E-42
8GO:0019843: rRNA binding1.03E-14
9GO:0004298: threonine-type endopeptidase activity8.46E-08
10GO:0003723: RNA binding1.25E-05
11GO:0003746: translation elongation factor activity1.32E-05
12GO:0008233: peptidase activity1.76E-05
13GO:0001055: RNA polymerase II activity1.19E-04
14GO:0008097: 5S rRNA binding1.19E-04
15GO:0001054: RNA polymerase I activity1.87E-04
16GO:0044183: protein binding involved in protein folding1.87E-04
17GO:0004576: oligosaccharyl transferase activity2.03E-04
18GO:0001056: RNA polymerase III activity2.28E-04
19GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity3.06E-04
20GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity6.05E-04
21GO:1990189: peptide-serine-N-acetyltransferase activity6.31E-04
22GO:1990190: peptide-glutamate-N-acetyltransferase activity6.31E-04
23GO:1990259: histone-glutamine methyltransferase activity6.31E-04
24GO:0035614: snRNA stem-loop binding6.31E-04
25GO:0008121: ubiquinol-cytochrome-c reductase activity7.25E-04
26GO:0043022: ribosome binding9.01E-04
27GO:0015288: porin activity9.01E-04
28GO:0008308: voltage-gated anion channel activity1.10E-03
29GO:0030619: U1 snRNA binding1.36E-03
30GO:0015173: aromatic amino acid transmembrane transporter activity1.36E-03
31GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.62E-03
32GO:0003899: DNA-directed 5'-3' RNA polymerase activity2.03E-03
33GO:0070181: small ribosomal subunit rRNA binding2.24E-03
34GO:0003955: NAD(P)H dehydrogenase (quinone) activity2.24E-03
35GO:0008649: rRNA methyltransferase activity2.24E-03
36GO:0005457: GDP-fucose transmembrane transporter activity2.24E-03
37GO:0015462: ATPase-coupled protein transmembrane transporter activity2.24E-03
38GO:0008430: selenium binding2.24E-03
39GO:0015266: protein channel activity2.74E-03
40GO:0003999: adenine phosphoribosyltransferase activity3.25E-03
41GO:0005460: UDP-glucose transmembrane transporter activity3.25E-03
42GO:0004550: nucleoside diphosphate kinase activity3.25E-03
43GO:0017089: glycolipid transporter activity3.25E-03
44GO:0004749: ribose phosphate diphosphokinase activity3.25E-03
45GO:0051082: unfolded protein binding3.49E-03
46GO:0070628: proteasome binding4.38E-03
47GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances4.38E-03
48GO:0016004: phospholipase activator activity4.38E-03
49GO:0010011: auxin binding4.38E-03
50GO:0051861: glycolipid binding4.38E-03
51GO:0005459: UDP-galactose transmembrane transporter activity5.63E-03
52GO:0005275: amine transmembrane transporter activity5.63E-03
53GO:0031386: protein tag5.63E-03
54GO:0031593: polyubiquitin binding6.99E-03
55GO:0031177: phosphopantetheine binding6.99E-03
56GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity6.99E-03
57GO:0000035: acyl binding8.45E-03
58GO:0051920: peroxiredoxin activity8.45E-03
59GO:0008235: metalloexopeptidase activity1.00E-02
60GO:0042162: telomeric DNA binding1.00E-02
61GO:0030515: snoRNA binding1.00E-02
62GO:0005338: nucleotide-sugar transmembrane transporter activity1.00E-02
63GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process1.17E-02
64GO:0016209: antioxidant activity1.17E-02
65GO:0008515: sucrose transmembrane transporter activity2.13E-02
66GO:0008794: arsenate reductase (glutaredoxin) activity2.13E-02
67GO:0046961: proton-transporting ATPase activity, rotational mechanism2.13E-02
68GO:0008327: methyl-CpG binding2.13E-02
69GO:0031072: heat shock protein binding2.57E-02
70GO:0003697: single-stranded DNA binding2.58E-02
71GO:0051119: sugar transmembrane transporter activity3.04E-02
72GO:0043130: ubiquitin binding3.53E-02
73GO:0005528: FK506 binding3.53E-02
74GO:0003743: translation initiation factor activity3.73E-02
75GO:0051087: chaperone binding3.79E-02
76GO:0008514: organic anion transmembrane transporter activity4.88E-02
RankGO TermAdjusted P value
1GO:0043186: P granule0.00E+00
2GO:0022626: cytosolic ribosome2.74E-136
3GO:0005840: ribosome5.39E-136
4GO:0022625: cytosolic large ribosomal subunit5.99E-116
5GO:0022627: cytosolic small ribosomal subunit2.54E-91
6GO:0005829: cytosol1.46E-47
7GO:0005730: nucleolus1.91E-43
8GO:0005737: cytoplasm2.47E-42
9GO:0009506: plasmodesma2.39E-25
10GO:0005774: vacuolar membrane3.50E-22
11GO:0015934: large ribosomal subunit5.32E-19
12GO:0016020: membrane1.81E-14
13GO:0005773: vacuole1.72E-12
14GO:0015935: small ribosomal subunit3.92E-11
15GO:0005732: small nucleolar ribonucleoprotein complex7.59E-10
16GO:0000502: proteasome complex1.38E-09
17GO:0005618: cell wall4.92E-08
18GO:0009507: chloroplast8.29E-08
19GO:0005839: proteasome core complex8.46E-08
20GO:0005742: mitochondrial outer membrane translocase complex1.74E-06
21GO:0005681: spliceosomal complex1.04E-05
22GO:0005665: DNA-directed RNA polymerase II, core complex1.14E-05
23GO:0019013: viral nucleocapsid1.52E-05
24GO:0005886: plasma membrane2.03E-05
25GO:0034719: SMN-Sm protein complex5.65E-05
26GO:0005853: eukaryotic translation elongation factor 1 complex5.65E-05
27GO:0005685: U1 snRNP9.12E-05
28GO:0005736: DNA-directed RNA polymerase I complex9.12E-05
29GO:0005666: DNA-directed RNA polymerase III complex1.19E-04
30GO:0071011: precatalytic spliceosome1.19E-04
31GO:0000418: DNA-directed RNA polymerase IV complex1.50E-04
32GO:0071013: catalytic step 2 spliceosome1.87E-04
33GO:0005682: U5 snRNP2.03E-04
34GO:0008250: oligosaccharyltransferase complex3.06E-04
35GO:0005687: U4 snRNP3.06E-04
36GO:0097526: spliceosomal tri-snRNP complex3.06E-04
37GO:0000419: DNA-directed RNA polymerase V complex4.36E-04
38GO:0005689: U12-type spliceosomal complex5.67E-04
39GO:0030686: 90S preribosome6.31E-04
40GO:0005622: intracellular6.84E-04
41GO:0005688: U6 snRNP9.01E-04
42GO:0046540: U4/U6 x U5 tri-snRNP complex1.10E-03
43GO:0046930: pore complex1.10E-03
44GO:0019773: proteasome core complex, alpha-subunit complex1.10E-03
45GO:0071010: prespliceosome1.36E-03
46GO:0035145: exon-exon junction complex1.36E-03
47GO:0031415: NatA complex1.36E-03
48GO:0005697: telomerase holoenzyme complex1.36E-03
49GO:0015030: Cajal body1.55E-03
50GO:0005686: U2 snRNP1.81E-03
51GO:0008541: proteasome regulatory particle, lid subcomplex2.10E-03
52GO:0034715: pICln-Sm protein complex2.24E-03
53GO:0005750: mitochondrial respiratory chain complex III3.09E-03
54GO:0033180: proton-transporting V-type ATPase, V1 domain3.25E-03
55GO:1990726: Lsm1-7-Pat1 complex3.25E-03
56GO:0005758: mitochondrial intermembrane space4.30E-03
57GO:0016471: vacuolar proton-transporting V-type ATPase complex4.38E-03
58GO:0005741: mitochondrial outer membrane5.22E-03
59GO:0031428: box C/D snoRNP complex6.99E-03
60GO:0000243: commitment complex6.99E-03
61GO:0016272: prefoldin complex8.45E-03
62GO:0071004: U2-type prespliceosome1.17E-02
63GO:0005747: mitochondrial respiratory chain complex I1.27E-02
64GO:0030529: intracellular ribonucleoprotein complex1.55E-02
65GO:0005788: endoplasmic reticulum lumen1.64E-02
66GO:0016604: nuclear body1.72E-02
67GO:0005740: mitochondrial envelope1.92E-02
68GO:0005852: eukaryotic translation initiation factor 3 complex2.13E-02
69GO:0031307: integral component of mitochondrial outer membrane2.34E-02
70GO:0032040: small-subunit processome2.34E-02
71GO:0005783: endoplasmic reticulum2.44E-02
72GO:0009508: plastid chromosome2.57E-02
73GO:0005759: mitochondrial matrix2.74E-02
74GO:0005743: mitochondrial inner membrane3.44E-02
75GO:0045271: respiratory chain complex I3.79E-02
76GO:0070469: respiratory chain3.79E-02
77GO:0005635: nuclear envelope4.78E-02
78GO:0005744: mitochondrial inner membrane presequence translocase complex4.88E-02
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Gene type



Gene DE type