Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G32900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046677: response to antibiotic0.00E+00
2GO:0010243: response to organonitrogen compound0.00E+00
3GO:0015843: methylammonium transport0.00E+00
4GO:1901401: regulation of tetrapyrrole metabolic process0.00E+00
5GO:0009915: phloem sucrose loading6.16E-05
6GO:0043496: regulation of protein homodimerization activity6.16E-05
7GO:0050992: dimethylallyl diphosphate biosynthetic process6.16E-05
8GO:0016122: xanthophyll metabolic process6.16E-05
9GO:0042754: negative regulation of circadian rhythm6.16E-05
10GO:0009416: response to light stimulus8.04E-05
11GO:0007623: circadian rhythm9.08E-05
12GO:0015696: ammonium transport1.62E-04
13GO:2001141: regulation of RNA biosynthetic process1.62E-04
14GO:0009658: chloroplast organization1.70E-04
15GO:0015995: chlorophyll biosynthetic process2.15E-04
16GO:0015994: chlorophyll metabolic process2.21E-04
17GO:0072488: ammonium transmembrane transport2.21E-04
18GO:0071483: cellular response to blue light2.21E-04
19GO:0010218: response to far red light2.65E-04
20GO:0009637: response to blue light3.05E-04
21GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.51E-04
22GO:0055114: oxidation-reduction process3.75E-04
23GO:0010114: response to red light3.92E-04
24GO:0071470: cellular response to osmotic stress4.20E-04
25GO:0010189: vitamin E biosynthetic process4.20E-04
26GO:0009648: photoperiodism4.20E-04
27GO:0009644: response to high light intensity4.24E-04
28GO:0009409: response to cold4.37E-04
29GO:0009769: photosynthesis, light harvesting in photosystem II4.92E-04
30GO:0009645: response to low light intensity stimulus4.92E-04
31GO:0006810: transport4.96E-04
32GO:0009585: red, far-red light phototransduction5.25E-04
33GO:0071482: cellular response to light stimulus6.45E-04
34GO:0048574: long-day photoperiodism, flowering6.45E-04
35GO:0006098: pentose-phosphate shunt7.25E-04
36GO:0009624: response to nematode7.36E-04
37GO:0009970: cellular response to sulfate starvation8.92E-04
38GO:0006995: cellular response to nitrogen starvation8.92E-04
39GO:0009641: shade avoidance8.92E-04
40GO:0045893: positive regulation of transcription, DNA-templated9.27E-04
41GO:0006352: DNA-templated transcription, initiation9.78E-04
42GO:0018107: peptidyl-threonine phosphorylation1.16E-03
43GO:0006094: gluconeogenesis1.16E-03
44GO:0010207: photosystem II assembly1.25E-03
45GO:0010223: secondary shoot formation1.25E-03
46GO:0009266: response to temperature stimulus1.25E-03
47GO:0009768: photosynthesis, light harvesting in photosystem I1.65E-03
48GO:0009269: response to desiccation1.76E-03
49GO:0010017: red or far-red light signaling pathway1.87E-03
50GO:0019748: secondary metabolic process1.87E-03
51GO:0006979: response to oxidative stress1.89E-03
52GO:0006606: protein import into nucleus2.33E-03
53GO:0015979: photosynthesis2.65E-03
54GO:0046686: response to cadmium ion3.28E-03
55GO:0018298: protein-chromophore linkage4.34E-03
56GO:0008219: cell death4.34E-03
57GO:0006811: ion transport4.64E-03
58GO:0034599: cellular response to oxidative stress5.26E-03
59GO:0006631: fatty acid metabolic process5.75E-03
60GO:0042542: response to hydrogen peroxide5.91E-03
61GO:0031347: regulation of defense response6.94E-03
62GO:0009909: regulation of flower development8.02E-03
63GO:0006096: glycolytic process8.40E-03
64GO:0018105: peptidyl-serine phosphorylation9.75E-03
65GO:0042744: hydrogen peroxide catabolic process1.23E-02
66GO:0016036: cellular response to phosphate starvation1.34E-02
67GO:0009739: response to gibberellin1.52E-02
68GO:0010468: regulation of gene expression1.59E-02
69GO:0009723: response to ethylene2.12E-02
70GO:0045454: cell redox homeostasis2.54E-02
71GO:0045892: negative regulation of transcription, DNA-templated2.57E-02
72GO:0009751: response to salicylic acid2.92E-02
73GO:0009753: response to jasmonic acid3.10E-02
74GO:0035556: intracellular signal transduction4.61E-02
RankGO TermAdjusted P value
1GO:0009976: tocopherol cyclase activity0.00E+00
2GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity0.00E+00
3GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity0.00E+00
4GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
5GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity2.41E-05
6GO:0035671: enone reductase activity2.41E-05
7GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity2.41E-05
8GO:0010277: chlorophyllide a oxygenase [overall] activity1.09E-04
9GO:0004096: catalase activity1.09E-04
10GO:0016987: sigma factor activity2.21E-04
11GO:0001053: plastid sigma factor activity2.21E-04
12GO:0051538: 3 iron, 4 sulfur cluster binding2.84E-04
13GO:0004332: fructose-bisphosphate aldolase activity3.51E-04
14GO:0000293: ferric-chelate reductase activity3.51E-04
15GO:0008519: ammonium transmembrane transporter activity3.51E-04
16GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity8.07E-04
17GO:0019904: protein domain specific binding9.78E-04
18GO:0031409: pigment binding1.45E-03
19GO:0003954: NADH dehydrogenase activity1.55E-03
20GO:0016853: isomerase activity2.57E-03
21GO:0016168: chlorophyll binding3.76E-03
22GO:0050897: cobalt ion binding4.80E-03
23GO:0016887: ATPase activity5.26E-03
24GO:0004185: serine-type carboxypeptidase activity6.08E-03
25GO:0051537: 2 iron, 2 sulfur cluster binding6.42E-03
26GO:0003899: DNA-directed 5'-3' RNA polymerase activity7.47E-03
27GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups8.59E-03
28GO:0016874: ligase activity9.16E-03
29GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.14E-02
30GO:0008565: protein transporter activity1.27E-02
31GO:0005215: transporter activity1.35E-02
32GO:0016491: oxidoreductase activity1.61E-02
RankGO TermAdjusted P value
1GO:0010287: plastoglobule1.37E-06
2GO:0009941: chloroplast envelope1.09E-05
3GO:0009706: chloroplast inner membrane3.96E-05
4GO:0009507: chloroplast5.27E-05
5GO:0031304: intrinsic component of mitochondrial inner membrane6.16E-05
6GO:0009534: chloroplast thylakoid1.13E-04
7GO:0009535: chloroplast thylakoid membrane1.46E-04
8GO:0010319: stromule1.60E-04
9GO:0009517: PSII associated light-harvesting complex II2.21E-04
10GO:0009514: glyoxysome6.45E-04
11GO:0005777: peroxisome9.27E-04
12GO:0009579: thylakoid9.76E-04
13GO:0009570: chloroplast stroma1.05E-03
14GO:0030076: light-harvesting complex1.35E-03
15GO:0042651: thylakoid membrane1.65E-03
16GO:0009522: photosystem I2.57E-03
17GO:0009523: photosystem II2.70E-03
18GO:0031977: thylakoid lumen5.75E-03
19GO:0022626: cytosolic ribosome5.76E-03
20GO:0005622: intracellular1.07E-02
21GO:0005887: integral component of plasma membrane3.66E-02
22GO:0048046: apoplast4.44E-02
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Gene type



Gene DE type