co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G32580

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006044: N-acetylglucosamine metabolic process	0.00E+00
2	GO:0000740: nuclear membrane fusion	0.00E+00
3	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
4	GO:0046085: adenosine metabolic process	0.00E+00
5	GO:0009092: homoserine metabolic process	0.00E+00
6	GO:0006412: translation	3.11E-09
7	GO:0042254: ribosome biogenesis	7.27E-06
8	GO:0000387: spliceosomal snRNP assembly	5.97E-05
9	GO:0034243: regulation of transcription elongation from RNA polymerase II promoter	1.62E-04
10	GO:0010198: synergid death	1.62E-04
11	GO:0006432: phenylalanyl-tRNA aminoacylation	1.62E-04
12	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	1.62E-04
13	GO:0008216: spermidine metabolic process	2.75E-04
14	GO:0032786: positive regulation of DNA-templated transcription, elongation	2.75E-04
15	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	2.75E-04
16	GO:0000398: mRNA splicing, via spliceosome	3.26E-04
17	GO:0051085: chaperone mediated protein folding requiring cofactor	3.98E-04
18	GO:0009558: embryo sac cellularization	3.98E-04
19	GO:0009165: nucleotide biosynthetic process	5.32E-04
20	GO:1900864: mitochondrial RNA modification	5.32E-04
21	GO:0006544: glycine metabolic process	6.73E-04
22	GO:0006563: L-serine metabolic process	8.23E-04
23	GO:0009088: threonine biosynthetic process	9.79E-04
24	GO:0009099: valine biosynthetic process	9.79E-04
25	GO:0009097: isoleucine biosynthetic process	1.50E-03
26	GO:0010100: negative regulation of photomorphogenesis	1.50E-03
27	GO:0048589: developmental growth	1.69E-03
28	GO:0009245: lipid A biosynthetic process	1.69E-03
29	GO:0032259: methylation	1.89E-03
30	GO:0035999: tetrahydrofolate interconversion	1.89E-03
31	GO:0009098: leucine biosynthetic process	1.89E-03
32	GO:0009086: methionine biosynthetic process	1.89E-03
33	GO:1900865: chloroplast RNA modification	1.89E-03
34	GO:0010267: production of ta-siRNAs involved in RNA interference	1.89E-03
35	GO:0006281: DNA repair	1.99E-03
36	GO:0006325: chromatin organization	2.10E-03
37	GO:0010020: chloroplast fission	2.99E-03
38	GO:0034976: response to endoplasmic reticulum stress	3.48E-03
39	GO:0009116: nucleoside metabolic process	3.73E-03
40	GO:0006406: mRNA export from nucleus	3.73E-03
41	GO:0016226: iron-sulfur cluster assembly	4.53E-03
42	GO:0006457: protein folding	5.71E-03
43	GO:0010197: polar nucleus fusion	5.98E-03
44	GO:0031047: gene silencing by RNA	7.24E-03
45	GO:0016126: sterol biosynthetic process	8.93E-03
46	GO:0006397: mRNA processing	1.32E-02
47	GO:0015031: protein transport	1.37E-02
48	GO:0000154: rRNA modification	1.65E-02
49	GO:0009809: lignin biosynthetic process	1.88E-02
50	GO:0009585: red, far-red light phototransduction	1.88E-02
51	GO:0009620: response to fungus	2.26E-02
52	GO:0009553: embryo sac development	2.37E-02
53	GO:0006952: defense response	2.76E-02
54	GO:0006633: fatty acid biosynthetic process	3.33E-02
55	GO:0008380: RNA splicing	4.04E-02
56	GO:0009617: response to bacterium	4.04E-02
57	GO:0009651: response to salt stress	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0004343: glucosamine 6-phosphate N-acetyltransferase activity	0.00E+00
2	GO:0003735: structural constituent of ribosome	4.55E-13
3	GO:0003729: mRNA binding	1.64E-07
4	GO:0004413: homoserine kinase activity	6.74E-05
5	GO:0072547: tricoumaroylspermidine meta-hydroxylase activity	6.74E-05
6	GO:0072549: monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity	6.74E-05
7	GO:0072548: dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity	6.74E-05
8	GO:0003697: single-stranded DNA binding	7.43E-05
9	GO:0004826: phenylalanine-tRNA ligase activity	1.62E-04
10	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.62E-04
11	GO:0008430: selenium binding	2.75E-04
12	GO:0008649: rRNA methyltransferase activity	2.75E-04
13	GO:0019843: rRNA binding	3.63E-04
14	GO:0052654: L-leucine transaminase activity	3.98E-04
15	GO:0052655: L-valine transaminase activity	3.98E-04
16	GO:0004749: ribose phosphate diphosphokinase activity	3.98E-04
17	GO:0000254: C-4 methylsterol oxidase activity	3.98E-04
18	GO:0052656: L-isoleucine transaminase activity	3.98E-04
19	GO:0005319: lipid transporter activity	5.32E-04
20	GO:0004084: branched-chain-amino-acid transaminase activity	5.32E-04
21	GO:0000993: RNA polymerase II core binding	5.32E-04
22	GO:0004372: glycine hydroxymethyltransferase activity	6.73E-04
23	GO:0031177: phosphopantetheine binding	8.23E-04
24	GO:0008168: methyltransferase activity	8.97E-04
25	GO:0000035: acyl binding	9.79E-04
26	GO:0042162: telomeric DNA binding	1.14E-03
27	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.32E-03
28	GO:0003723: RNA binding	1.41E-03
29	GO:0008047: enzyme activator activity	2.10E-03
30	GO:0000049: tRNA binding	2.53E-03
31	GO:0031072: heat shock protein binding	2.76E-03
32	GO:0003727: single-stranded RNA binding	5.09E-03
33	GO:0003756: protein disulfide isomerase activity	5.09E-03
34	GO:0008080: N-acetyltransferase activity	5.98E-03
35	GO:0008375: acetylglucosaminyltransferase activity	9.65E-03
36	GO:0003824: catalytic activity	1.13E-02
37	GO:0003746: translation elongation factor activity	1.27E-02
38	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.70E-02
39	GO:0003690: double-stranded DNA binding	1.93E-02
40	GO:0051082: unfolded protein binding	2.42E-02
41	GO:0030170: pyridoxal phosphate binding	3.05E-02

Rank	GO Term	Adjusted P value
1	GO:0043186: P granule	0.00E+00
2	GO:0005840: ribosome	9.68E-11
3	GO:0022626: cytosolic ribosome	5.23E-07
4	GO:0019013: viral nucleocapsid	1.73E-06
5	GO:0005732: small nucleolar ribonucleoprotein complex	1.94E-05
6	GO:0043190: ATP-binding cassette (ABC) transporter complex	6.74E-05
7	GO:0032044: DSIF complex	6.74E-05
8	GO:0022627: cytosolic small ribosomal subunit	8.07E-05
9	GO:0005697: telomerase holoenzyme complex	1.62E-04
10	GO:0022625: cytosolic large ribosomal subunit	1.70E-04
11	GO:0005739: mitochondrion	2.29E-04
12	GO:0034719: SMN-Sm protein complex	2.75E-04
13	GO:0005682: U5 snRNP	5.32E-04
14	GO:0000445: THO complex part of transcription export complex	5.32E-04
15	GO:0005687: U4 snRNP	6.73E-04
16	GO:0097526: spliceosomal tri-snRNP complex	6.73E-04
17	GO:0005762: mitochondrial large ribosomal subunit	9.79E-04
18	GO:0005689: U12-type spliceosomal complex	9.79E-04
19	GO:0005730: nucleolus	1.05E-03
20	GO:0000347: THO complex	1.14E-03
21	GO:0071004: U2-type prespliceosome	1.32E-03
22	GO:0005742: mitochondrial outer membrane translocase complex	1.50E-03
23	GO:0005763: mitochondrial small ribosomal subunit	1.69E-03
24	GO:0005685: U1 snRNP	1.69E-03
25	GO:0071011: precatalytic spliceosome	1.89E-03
26	GO:0005686: U2 snRNP	2.10E-03
27	GO:0005681: spliceosomal complex	2.18E-03
28	GO:0071013: catalytic step 2 spliceosome	2.31E-03
29	GO:0048471: perinuclear region of cytoplasm	2.31E-03
30	GO:0009706: chloroplast inner membrane	2.61E-03
31	GO:0009508: plastid chromosome	2.76E-03
32	GO:0009536: plastid	2.85E-03
33	GO:0070469: respiratory chain	3.99E-03
34	GO:0015935: small ribosomal subunit	4.26E-03
35	GO:0009507: chloroplast	5.75E-03
36	GO:0009295: nucleoid	8.24E-03
37	GO:0009707: chloroplast outer membrane	1.08E-02
38	GO:0015934: large ribosomal subunit	1.19E-02
39	GO:0009506: plasmodesma	1.31E-02
40	GO:0005829: cytosol	2.02E-02
41	GO:0009941: chloroplast envelope	2.16E-02
42	GO:0009543: chloroplast thylakoid lumen	2.84E-02
43	GO:0009570: chloroplast stroma	3.53E-02
44	GO:0046658: anchored component of plasma membrane	4.35E-02
45	GO:0005774: vacuolar membrane	4.76E-02