co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G31020

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006452: translational frameshifting	1.13E-04
2	GO:0045905: positive regulation of translational termination	1.13E-04
3	GO:0045901: positive regulation of translational elongation	1.13E-04
4	GO:0034227: tRNA thio-modification	1.95E-04
5	GO:0015991: ATP hydrolysis coupled proton transport	2.14E-04
6	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	2.85E-04
7	GO:0042254: ribosome biogenesis	5.17E-04
8	GO:0043248: proteasome assembly	5.98E-04
9	GO:0006574: valine catabolic process	5.98E-04
10	GO:0006555: methionine metabolic process	5.98E-04
11	GO:0019509: L-methionine salvage from methylthioadenosine	7.13E-04
12	GO:0098655: cation transmembrane transport	7.13E-04
13	GO:0006506: GPI anchor biosynthetic process	9.57E-04
14	GO:0048589: developmental growth	1.22E-03
15	GO:0043069: negative regulation of programmed cell death	1.51E-03
16	GO:0012501: programmed cell death	1.81E-03
17	GO:0016925: protein sumoylation	1.81E-03
18	GO:0000398: mRNA splicing, via spliceosome	1.84E-03
19	GO:0010039: response to iron ion	2.31E-03
20	GO:0007033: vacuole organization	2.31E-03
21	GO:0006406: mRNA export from nucleus	2.67E-03
22	GO:0006487: protein N-linked glycosylation	2.67E-03
23	GO:0051302: regulation of cell division	2.85E-03
24	GO:0006412: translation	3.08E-03
25	GO:0019722: calcium-mediated signaling	3.63E-03
26	GO:0010089: xylem development	3.63E-03
27	GO:0006623: protein targeting to vacuole	4.68E-03
28	GO:0016192: vesicle-mediated transport	5.48E-03
29	GO:0006464: cellular protein modification process	5.60E-03
30	GO:0006914: autophagy	5.60E-03
31	GO:0010286: heat acclimation	5.84E-03
32	GO:0006906: vesicle fusion	6.82E-03
33	GO:0000724: double-strand break repair via homologous recombination	8.68E-03
34	GO:0009853: photorespiration	8.96E-03
35	GO:0006887: exocytosis	1.01E-02
36	GO:0009926: auxin polar transport	1.07E-02
37	GO:0006511: ubiquitin-dependent protein catabolic process	1.86E-02
38	GO:0006413: translational initiation	2.38E-02
39	GO:0008380: RNA splicing	2.84E-02

Rank	GO Term	Adjusted P value
1	GO:0001055: RNA polymerase II activity	3.34E-05
2	GO:0004129: cytochrome-c oxidase activity	4.81E-05
3	GO:0001054: RNA polymerase I activity	4.81E-05
4	GO:0001056: RNA polymerase III activity	5.65E-05
5	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	8.09E-05
6	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	1.95E-04
7	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	1.95E-04
8	GO:0022890: inorganic cation transmembrane transporter activity	2.85E-04
9	GO:0004576: oligosaccharyl transferase activity	3.84E-04
10	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	4.88E-04
11	GO:0031386: protein tag	4.88E-04
12	GO:0003735: structural constituent of ribosome	5.73E-04
13	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	7.13E-04
14	GO:0043022: ribosome binding	9.57E-04
15	GO:0015078: hydrogen ion transmembrane transporter activity	1.09E-03
16	GO:0046961: proton-transporting ATPase activity, rotational mechanism	1.66E-03
17	GO:0003684: damaged DNA binding	5.60E-03
18	GO:0003746: translation elongation factor activity	8.96E-03
19	GO:0000149: SNARE binding	9.53E-03
20	GO:0005484: SNAP receptor activity	1.07E-02
21	GO:0051287: NAD binding	1.23E-02
22	GO:0003690: double-stranded DNA binding	1.35E-02
23	GO:0008017: microtubule binding	2.59E-02
24	GO:0003743: translation initiation factor activity	2.80E-02

Rank	GO Term	Adjusted P value
1	GO:0005665: DNA-directed RNA polymerase II, core complex	5.57E-07
2	GO:0000419: DNA-directed RNA polymerase V complex	1.35E-06
3	GO:0031901: early endosome membrane	2.71E-05
4	GO:0005736: DNA-directed RNA polymerase I complex	2.71E-05
5	GO:0005666: DNA-directed RNA polymerase III complex	3.34E-05
6	GO:0072546: ER membrane protein complex	4.60E-05
7	GO:0005732: small nucleolar ribonucleoprotein complex	1.53E-04
8	GO:0005840: ribosome	1.73E-04
9	GO:0005751: mitochondrial respiratory chain complex IV	1.95E-04
10	GO:0033180: proton-transporting V-type ATPase, V1 domain	2.85E-04
11	GO:1990726: Lsm1-7-Pat1 complex	2.85E-04
12	GO:0033179: proton-transporting V-type ATPase, V0 domain	3.84E-04
13	GO:0008250: oligosaccharyltransferase complex	4.88E-04
14	GO:0022625: cytosolic large ribosomal subunit	7.03E-04
15	GO:0005688: U6 snRNP	9.57E-04
16	GO:0000421: autophagosome membrane	9.57E-04
17	GO:0046540: U4/U6 x U5 tri-snRNP complex	1.09E-03
18	GO:0071011: precatalytic spliceosome	1.36E-03
19	GO:0000418: DNA-directed RNA polymerase IV complex	1.51E-03
20	GO:0008541: proteasome regulatory particle, lid subcomplex	1.66E-03
21	GO:0071013: catalytic step 2 spliceosome	1.66E-03
22	GO:0022626: cytosolic ribosome	2.06E-03
23	GO:0005750: mitochondrial respiratory chain complex III	2.14E-03
24	GO:0005769: early endosome	2.49E-03
25	GO:0045271: respiratory chain complex I	2.85E-03
26	GO:0031410: cytoplasmic vesicle	3.23E-03
27	GO:0022627: cytosolic small ribosomal subunit	3.61E-03
28	GO:0000932: P-body	6.32E-03
29	GO:0015934: large ribosomal subunit	8.41E-03
30	GO:0005789: endoplasmic reticulum membrane	9.11E-03
31	GO:0031201: SNARE complex	1.01E-02
32	GO:0031966: mitochondrial membrane	1.26E-02
33	GO:0000502: proteasome complex	1.32E-02
34	GO:0005681: spliceosomal complex	1.49E-02
35	GO:0005747: mitochondrial respiratory chain complex I	1.52E-02
36	GO:0005622: intracellular	2.43E-02
37	GO:0005774: vacuolar membrane	2.57E-02
38	GO:0005829: cytosol	3.46E-02
39	GO:0000139: Golgi membrane	3.75E-02
40	GO:0005874: microtubule	3.88E-02