co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G29965

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0017126: nucleologenesis	0.00E+00
2	GO:0006412: translation	3.83E-20
3	GO:0042254: ribosome biogenesis	1.30E-07
4	GO:0050687: negative regulation of defense response to virus	2.08E-05
5	GO:1990258: histone glutamine methylation	2.08E-05
6	GO:0030490: maturation of SSU-rRNA	2.08E-05
7	GO:0000494: box C/D snoRNA 3'-end processing	2.08E-05
8	GO:0042274: ribosomal small subunit biogenesis	1.95E-04
9	GO:0031167: rRNA methylation	2.51E-04
10	GO:0006364: rRNA processing	4.39E-04
11	GO:0000028: ribosomal small subunit assembly	5.05E-04
12	GO:0001510: RNA methylation	5.74E-04
13	GO:0016573: histone acetylation	7.18E-04
14	GO:0010162: seed dormancy process	7.94E-04
15	GO:0030422: production of siRNA involved in RNA interference	7.94E-04
16	GO:0006413: translational initiation	9.72E-04
17	GO:0009887: animal organ morphogenesis	1.11E-03
18	GO:0051302: regulation of cell division	1.47E-03
19	GO:0015992: proton transport	1.56E-03
20	GO:0009561: megagametogenesis	1.86E-03
21	GO:0008033: tRNA processing	2.07E-03
22	GO:0009615: response to virus	3.21E-03
23	GO:0008283: cell proliferation	5.37E-03
24	GO:0006417: regulation of translation	7.07E-03
25	GO:0016569: covalent chromatin modification	8.07E-03
26	GO:0009790: embryo development	1.10E-02
27	GO:0006357: regulation of transcription from RNA polymerase II promoter	3.16E-02

Rank	GO Term	Adjusted P value
1	GO:0000340: RNA 7-methylguanosine cap binding	0.00E+00
2	GO:0003735: structural constituent of ribosome	1.59E-25
3	GO:1990259: histone-glutamine methyltransferase activity	2.08E-05
4	GO:0003729: mRNA binding	4.05E-05
5	GO:0008649: rRNA methyltransferase activity	9.50E-05
6	GO:0030515: snoRNA binding	4.37E-04
7	GO:0008135: translation factor activity, RNA binding	5.74E-04
8	GO:0001055: RNA polymerase II activity	7.18E-04
9	GO:0001054: RNA polymerase I activity	8.71E-04
10	GO:0001056: RNA polymerase III activity	9.50E-04
11	GO:0003723: RNA binding	1.02E-03
12	GO:0008083: growth factor activity	1.11E-03
13	GO:0003743: translation initiation factor activity	1.20E-03
14	GO:0004407: histone deacetylase activity	1.38E-03
15	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.84E-03
16	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	6.59E-03
17	GO:0019843: rRNA binding	9.85E-03
18	GO:0003924: GTPase activity	2.59E-02

Rank	GO Term	Adjusted P value
1	GO:0022627: cytosolic small ribosomal subunit	1.50E-17
2	GO:0022626: cytosolic ribosome	1.58E-16
3	GO:0005840: ribosome	2.28E-16
4	GO:0022625: cytosolic large ribosomal subunit	8.29E-11
5	GO:0005730: nucleolus	7.32E-09
6	GO:0032040: small-subunit processome	1.71E-05
7	GO:0035267: NuA4 histone acetyltransferase complex	5.37E-05
8	GO:0016592: mediator complex	1.07E-04
9	GO:0015934: large ribosomal subunit	2.30E-04
10	GO:0031428: box C/D snoRNP complex	3.11E-04
11	GO:0005829: cytosol	3.25E-04
12	GO:0005736: DNA-directed RNA polymerase I complex	6.45E-04
13	GO:0005666: DNA-directed RNA polymerase III complex	7.18E-04
14	GO:0015030: Cajal body	7.18E-04
15	GO:0000418: DNA-directed RNA polymerase IV complex	7.94E-04
16	GO:0005737: cytoplasm	8.75E-04
17	GO:0005665: DNA-directed RNA polymerase II, core complex	9.50E-04
18	GO:0031012: extracellular matrix	1.03E-03
19	GO:0000419: DNA-directed RNA polymerase V complex	1.29E-03
20	GO:0015935: small ribosomal subunit	1.56E-03
21	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.86E-03
22	GO:0009506: plasmodesma	2.57E-03
23	GO:0005773: vacuole	2.58E-03
24	GO:0005618: cell wall	8.46E-03
25	GO:0016020: membrane	2.87E-02