GO Enrichment Analysis of Co-expressed Genes with
AT1G29930
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
2 | GO:0016118: carotenoid catabolic process | 0.00E+00 |
3 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
4 | GO:0015717: triose phosphate transport | 0.00E+00 |
5 | GO:1903428: positive regulation of reactive oxygen species biosynthetic process | 0.00E+00 |
6 | GO:0015979: photosynthesis | 4.75E-34 |
7 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.48E-19 |
8 | GO:0018298: protein-chromophore linkage | 7.09E-16 |
9 | GO:0009773: photosynthetic electron transport in photosystem I | 2.18E-13 |
10 | GO:0010196: nonphotochemical quenching | 1.56E-12 |
11 | GO:0009645: response to low light intensity stimulus | 6.90E-10 |
12 | GO:0009769: photosynthesis, light harvesting in photosystem II | 2.01E-07 |
13 | GO:0009644: response to high light intensity | 2.16E-07 |
14 | GO:0009409: response to cold | 3.18E-07 |
15 | GO:0010206: photosystem II repair | 6.60E-07 |
16 | GO:0010218: response to far red light | 2.92E-06 |
17 | GO:0010207: photosystem II assembly | 3.29E-06 |
18 | GO:0019464: glycine decarboxylation via glycine cleavage system | 6.24E-06 |
19 | GO:0010021: amylopectin biosynthetic process | 6.24E-06 |
20 | GO:0010114: response to red light | 6.86E-06 |
21 | GO:0042742: defense response to bacterium | 1.41E-05 |
22 | GO:0009735: response to cytokinin | 1.50E-05 |
23 | GO:0042549: photosystem II stabilization | 1.59E-05 |
24 | GO:0010027: thylakoid membrane organization | 4.95E-05 |
25 | GO:0032544: plastid translation | 5.19E-05 |
26 | GO:0080093: regulation of photorespiration | 8.09E-05 |
27 | GO:0031998: regulation of fatty acid beta-oxidation | 8.09E-05 |
28 | GO:0009637: response to blue light | 1.06E-04 |
29 | GO:0019684: photosynthesis, light reaction | 1.11E-04 |
30 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.11E-04 |
31 | GO:0006094: gluconeogenesis | 1.49E-04 |
32 | GO:0009767: photosynthetic electron transport chain | 1.49E-04 |
33 | GO:0009416: response to light stimulus | 1.73E-04 |
34 | GO:0035304: regulation of protein dephosphorylation | 1.93E-04 |
35 | GO:0016124: xanthophyll catabolic process | 1.93E-04 |
36 | GO:0097054: L-glutamate biosynthetic process | 1.93E-04 |
37 | GO:0016121: carotene catabolic process | 1.93E-04 |
38 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.93E-04 |
39 | GO:0006000: fructose metabolic process | 3.24E-04 |
40 | GO:0035436: triose phosphate transmembrane transport | 3.24E-04 |
41 | GO:0090153: regulation of sphingolipid biosynthetic process | 3.24E-04 |
42 | GO:0016050: vesicle organization | 3.24E-04 |
43 | GO:0006537: glutamate biosynthetic process | 4.66E-04 |
44 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.66E-04 |
45 | GO:0071484: cellular response to light intensity | 4.66E-04 |
46 | GO:0019252: starch biosynthetic process | 5.54E-04 |
47 | GO:0009765: photosynthesis, light harvesting | 6.21E-04 |
48 | GO:0045727: positive regulation of translation | 6.21E-04 |
49 | GO:0015713: phosphoglycerate transport | 6.21E-04 |
50 | GO:0030104: water homeostasis | 6.21E-04 |
51 | GO:0006546: glycine catabolic process | 6.21E-04 |
52 | GO:0019676: ammonia assimilation cycle | 6.21E-04 |
53 | GO:0015976: carbon utilization | 6.21E-04 |
54 | GO:0007623: circadian rhythm | 7.39E-04 |
55 | GO:0006544: glycine metabolic process | 7.86E-04 |
56 | GO:0006097: glyoxylate cycle | 7.86E-04 |
57 | GO:0006461: protein complex assembly | 7.86E-04 |
58 | GO:0000470: maturation of LSU-rRNA | 9.59E-04 |
59 | GO:0009635: response to herbicide | 9.59E-04 |
60 | GO:0009643: photosynthetic acclimation | 9.59E-04 |
61 | GO:0006563: L-serine metabolic process | 9.59E-04 |
62 | GO:0015995: chlorophyll biosynthetic process | 9.86E-04 |
63 | GO:0009955: adaxial/abaxial pattern specification | 1.14E-03 |
64 | GO:1901259: chloroplast rRNA processing | 1.14E-03 |
65 | GO:0009658: chloroplast organization | 1.26E-03 |
66 | GO:0009772: photosynthetic electron transport in photosystem II | 1.34E-03 |
67 | GO:0071446: cellular response to salicylic acid stimulus | 1.34E-03 |
68 | GO:0009853: photorespiration | 1.36E-03 |
69 | GO:0005978: glycogen biosynthetic process | 1.54E-03 |
70 | GO:0080167: response to karrikin | 1.65E-03 |
71 | GO:0006002: fructose 6-phosphate metabolic process | 1.76E-03 |
72 | GO:0009657: plastid organization | 1.76E-03 |
73 | GO:2000031: regulation of salicylic acid mediated signaling pathway | 1.76E-03 |
74 | GO:0006098: pentose-phosphate shunt | 1.98E-03 |
75 | GO:0090333: regulation of stomatal closure | 1.98E-03 |
76 | GO:0010205: photoinhibition | 2.22E-03 |
77 | GO:0035999: tetrahydrofolate interconversion | 2.22E-03 |
78 | GO:0005982: starch metabolic process | 2.22E-03 |
79 | GO:0000272: polysaccharide catabolic process | 2.71E-03 |
80 | GO:0045037: protein import into chloroplast stroma | 2.97E-03 |
81 | GO:0005986: sucrose biosynthetic process | 3.24E-03 |
82 | GO:0006108: malate metabolic process | 3.24E-03 |
83 | GO:0006412: translation | 3.45E-03 |
84 | GO:0019253: reductive pentose-phosphate cycle | 3.52E-03 |
85 | GO:0005985: sucrose metabolic process | 3.81E-03 |
86 | GO:0006289: nucleotide-excision repair | 4.40E-03 |
87 | GO:0009269: response to desiccation | 5.02E-03 |
88 | GO:0035428: hexose transmembrane transport | 5.34E-03 |
89 | GO:0006810: transport | 5.41E-03 |
90 | GO:0071215: cellular response to abscisic acid stimulus | 5.67E-03 |
91 | GO:0046686: response to cadmium ion | 5.92E-03 |
92 | GO:0042631: cellular response to water deprivation | 6.70E-03 |
93 | GO:0048868: pollen tube development | 7.06E-03 |
94 | GO:0046323: glucose import | 7.06E-03 |
95 | GO:0006814: sodium ion transport | 7.42E-03 |
96 | GO:0000302: response to reactive oxygen species | 8.17E-03 |
97 | GO:0042254: ribosome biogenesis | 8.96E-03 |
98 | GO:0016311: dephosphorylation | 1.23E-02 |
99 | GO:0010119: regulation of stomatal movement | 1.41E-02 |
100 | GO:0034599: cellular response to oxidative stress | 1.56E-02 |
101 | GO:0006099: tricarboxylic acid cycle | 1.56E-02 |
102 | GO:0009744: response to sucrose | 1.80E-02 |
103 | GO:0031347: regulation of defense response | 2.07E-02 |
104 | GO:0006364: rRNA processing | 2.23E-02 |
105 | GO:0006096: glycolytic process | 2.51E-02 |
106 | GO:0009626: plant-type hypersensitive response | 2.63E-02 |
107 | GO:0009624: response to nematode | 2.87E-02 |
108 | GO:0009737: response to abscisic acid | 3.54E-02 |
109 | GO:0055085: transmembrane transport | 3.64E-02 |
110 | GO:0042744: hydrogen peroxide catabolic process | 3.69E-02 |
111 | GO:0009790: embryo development | 3.76E-02 |
112 | GO:0009793: embryo development ending in seed dormancy | 3.91E-02 |
113 | GO:0010468: regulation of gene expression | 4.80E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
2 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
3 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
4 | GO:0051738: xanthophyll binding | 0.00E+00 |
5 | GO:0031409: pigment binding | 1.08E-19 |
6 | GO:0016168: chlorophyll binding | 1.64E-18 |
7 | GO:0008266: poly(U) RNA binding | 2.99E-08 |
8 | GO:0019843: rRNA binding | 5.65E-08 |
9 | GO:0005515: protein binding | 5.44E-05 |
10 | GO:0010242: oxygen evolving activity | 8.09E-05 |
11 | GO:0009496: plastoquinol--plastocyanin reductase activity | 8.09E-05 |
12 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 8.09E-05 |
13 | GO:0045157: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity | 8.09E-05 |
14 | GO:0008158: hedgehog receptor activity | 8.09E-05 |
15 | GO:0016041: glutamate synthase (ferredoxin) activity | 8.09E-05 |
16 | GO:0033201: alpha-1,4-glucan synthase activity | 1.93E-04 |
17 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.93E-04 |
18 | GO:0008967: phosphoglycolate phosphatase activity | 1.93E-04 |
19 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 1.93E-04 |
20 | GO:0010297: heteropolysaccharide binding | 1.93E-04 |
21 | GO:0046872: metal ion binding | 2.62E-04 |
22 | GO:0004324: ferredoxin-NADP+ reductase activity | 3.24E-04 |
23 | GO:0043169: cation binding | 3.24E-04 |
24 | GO:0004373: glycogen (starch) synthase activity | 3.24E-04 |
25 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 3.24E-04 |
26 | GO:0071917: triose-phosphate transmembrane transporter activity | 3.24E-04 |
27 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.66E-04 |
28 | GO:0016851: magnesium chelatase activity | 4.66E-04 |
29 | GO:0003735: structural constituent of ribosome | 5.17E-04 |
30 | GO:0009011: starch synthase activity | 6.21E-04 |
31 | GO:0015120: phosphoglycerate transmembrane transporter activity | 6.21E-04 |
32 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 6.21E-04 |
33 | GO:0004372: glycine hydroxymethyltransferase activity | 7.86E-04 |
34 | GO:0003959: NADPH dehydrogenase activity | 7.86E-04 |
35 | GO:0051538: 3 iron, 4 sulfur cluster binding | 7.86E-04 |
36 | GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity | 7.86E-04 |
37 | GO:0004332: fructose-bisphosphate aldolase activity | 9.59E-04 |
38 | GO:0004130: cytochrome-c peroxidase activity | 9.59E-04 |
39 | GO:0016615: malate dehydrogenase activity | 9.59E-04 |
40 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.14E-03 |
41 | GO:0030060: L-malate dehydrogenase activity | 1.14E-03 |
42 | GO:0071949: FAD binding | 1.98E-03 |
43 | GO:0005509: calcium ion binding | 2.67E-03 |
44 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.24E-03 |
45 | GO:0004089: carbonate dehydratase activity | 3.24E-03 |
46 | GO:0031072: heat shock protein binding | 3.24E-03 |
47 | GO:0015144: carbohydrate transmembrane transporter activity | 4.93E-03 |
48 | GO:0005351: sugar:proton symporter activity | 5.56E-03 |
49 | GO:0022891: substrate-specific transmembrane transporter activity | 5.67E-03 |
50 | GO:0003756: protein disulfide isomerase activity | 6.01E-03 |
51 | GO:0008514: organic anion transmembrane transporter activity | 6.01E-03 |
52 | GO:0005355: glucose transmembrane transporter activity | 7.42E-03 |
53 | GO:0050662: coenzyme binding | 7.42E-03 |
54 | GO:0048038: quinone binding | 8.17E-03 |
55 | GO:0003746: translation elongation factor activity | 1.51E-02 |
56 | GO:0003993: acid phosphatase activity | 1.56E-02 |
57 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.91E-02 |
58 | GO:0016491: oxidoreductase activity | 1.94E-02 |
59 | GO:0005198: structural molecule activity | 1.96E-02 |
60 | GO:0015293: symporter activity | 1.96E-02 |
61 | GO:0051082: unfolded protein binding | 2.87E-02 |
62 | GO:0030170: pyridoxal phosphate binding | 3.62E-02 |
63 | GO:0008565: protein transporter activity | 3.82E-02 |
64 | GO:0015297: antiporter activity | 4.09E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
2 | GO:0009783: photosystem II antenna complex | 0.00E+00 |
3 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
4 | GO:0042579: microbody | 0.00E+00 |
5 | GO:0009534: chloroplast thylakoid | 2.47E-72 |
6 | GO:0009535: chloroplast thylakoid membrane | 7.09E-60 |
7 | GO:0009507: chloroplast | 2.05E-50 |
8 | GO:0009579: thylakoid | 2.46E-46 |
9 | GO:0009941: chloroplast envelope | 1.64E-42 |
10 | GO:0010287: plastoglobule | 1.21E-24 |
11 | GO:0009570: chloroplast stroma | 9.53E-21 |
12 | GO:0009522: photosystem I | 6.16E-20 |
13 | GO:0030076: light-harvesting complex | 2.07E-17 |
14 | GO:0009523: photosystem II | 3.32E-15 |
15 | GO:0009543: chloroplast thylakoid lumen | 8.88E-15 |
16 | GO:0031977: thylakoid lumen | 4.92E-13 |
17 | GO:0016020: membrane | 5.95E-13 |
18 | GO:0030095: chloroplast photosystem II | 9.48E-13 |
19 | GO:0042651: thylakoid membrane | 7.01E-10 |
20 | GO:0009538: photosystem I reaction center | 1.26E-09 |
21 | GO:0009517: PSII associated light-harvesting complex II | 1.51E-08 |
22 | GO:0048046: apoplast | 2.05E-08 |
23 | GO:0009654: photosystem II oxygen evolving complex | 8.43E-08 |
24 | GO:0030093: chloroplast photosystem I | 3.58E-07 |
25 | GO:0019898: extrinsic component of membrane | 4.76E-07 |
26 | GO:0009706: chloroplast inner membrane | 1.02E-06 |
27 | GO:0009508: plastid chromosome | 2.64E-06 |
28 | GO:0016021: integral component of membrane | 7.42E-06 |
29 | GO:0005840: ribosome | 1.63E-05 |
30 | GO:0009533: chloroplast stromal thylakoid | 3.11E-05 |
31 | GO:0009501: amyloplast | 4.08E-05 |
32 | GO:0009295: nucleoid | 4.13E-05 |
33 | GO:0010319: stromule | 4.13E-05 |
34 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 6.45E-05 |
35 | GO:0009782: photosystem I antenna complex | 8.09E-05 |
36 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.93E-04 |
37 | GO:0031969: chloroplast membrane | 2.35E-04 |
38 | GO:0010007: magnesium chelatase complex | 3.24E-04 |
39 | GO:0005960: glycine cleavage complex | 4.66E-04 |
40 | GO:0055035: plastid thylakoid membrane | 7.86E-04 |
41 | GO:0009512: cytochrome b6f complex | 7.86E-04 |
42 | GO:0042644: chloroplast nucleoid | 1.98E-03 |
43 | GO:0005763: mitochondrial small ribosomal subunit | 1.98E-03 |
44 | GO:0005759: mitochondrial matrix | 5.18E-03 |
45 | GO:0015934: large ribosomal subunit | 1.41E-02 |
46 | GO:0005777: peroxisome | 3.29E-02 |
47 | GO:0005623: cell | 3.43E-02 |
48 | GO:0005773: vacuole | 3.69E-02 |