Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G29340

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002764: immune response-regulating signaling pathway0.00E+00
2GO:0042353: fucose biosynthetic process0.00E+00
3GO:1900490: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity0.00E+00
4GO:0019593: mannitol biosynthetic process0.00E+00
5GO:0015969: guanosine tetraphosphate metabolic process1.48E-05
6GO:0071366: cellular response to indolebutyric acid stimulus1.48E-05
7GO:0009863: salicylic acid mediated signaling pathway2.10E-05
8GO:0046740: transport of virus in host, cell to cell3.88E-05
9GO:0071395: cellular response to jasmonic acid stimulus3.88E-05
10GO:0042344: indole glucosinolate catabolic process6.95E-05
11GO:0016045: detection of bacterium6.95E-05
12GO:0010359: regulation of anion channel activity6.95E-05
13GO:0010325: raffinose family oligosaccharide biosynthetic process6.95E-05
14GO:0030100: regulation of endocytosis1.05E-04
15GO:0010071: root meristem specification1.05E-04
16GO:0046777: protein autophosphorylation1.06E-04
17GO:1902347: response to strigolactone1.45E-04
18GO:0015691: cadmium ion transport2.34E-04
19GO:0010256: endomembrane system organization2.34E-04
20GO:0071446: cellular response to salicylic acid stimulus3.32E-04
21GO:1900150: regulation of defense response to fungus3.84E-04
22GO:0010078: maintenance of root meristem identity3.84E-04
23GO:0010492: maintenance of shoot apical meristem identity3.84E-04
24GO:0060321: acceptance of pollen4.37E-04
25GO:0010204: defense response signaling pathway, resistance gene-independent4.37E-04
26GO:0010345: suberin biosynthetic process4.93E-04
27GO:0090305: nucleic acid phosphodiester bond hydrolysis4.93E-04
28GO:0010018: far-red light signaling pathway5.49E-04
29GO:0019538: protein metabolic process6.08E-04
30GO:0009688: abscisic acid biosynthetic process6.08E-04
31GO:0052544: defense response by callose deposition in cell wall6.67E-04
32GO:0005986: sucrose biosynthetic process7.91E-04
33GO:0009414: response to water deprivation8.54E-04
34GO:0010143: cutin biosynthetic process8.55E-04
35GO:0009969: xyloglucan biosynthetic process9.19E-04
36GO:0070588: calcium ion transmembrane transport9.19E-04
37GO:0046854: phosphatidylinositol phosphorylation9.19E-04
38GO:0010025: wax biosynthetic process9.85E-04
39GO:0042753: positive regulation of circadian rhythm9.85E-04
40GO:0008299: isoprenoid biosynthetic process1.12E-03
41GO:0030433: ubiquitin-dependent ERAD pathway1.26E-03
42GO:0031348: negative regulation of defense response1.26E-03
43GO:0042335: cuticle development1.57E-03
44GO:0000271: polysaccharide biosynthetic process1.57E-03
45GO:0080022: primary root development1.57E-03
46GO:0045489: pectin biosynthetic process1.65E-03
47GO:0010193: response to ozone1.89E-03
48GO:0009639: response to red or far red light2.15E-03
49GO:0009737: response to abscisic acid2.25E-03
50GO:0009627: systemic acquired resistance2.61E-03
51GO:0009817: defense response to fungus, incompatible interaction2.90E-03
52GO:0009611: response to wounding3.38E-03
53GO:0016051: carbohydrate biosynthetic process3.40E-03
54GO:0006897: endocytosis3.82E-03
55GO:0006855: drug transmembrane transport4.49E-03
56GO:0031347: regulation of defense response4.60E-03
57GO:0042538: hyperosmotic salinity response4.71E-03
58GO:0009846: pollen germination4.71E-03
59GO:0009585: red, far-red light phototransduction4.95E-03
60GO:0009626: plant-type hypersensitive response5.80E-03
61GO:0009620: response to fungus5.93E-03
62GO:0018105: peptidyl-serine phosphorylation6.44E-03
63GO:0007623: circadian rhythm9.23E-03
64GO:0006470: protein dephosphorylation1.01E-02
65GO:0010468: regulation of gene expression1.04E-02
66GO:0009617: response to bacterium1.04E-02
67GO:0006468: protein phosphorylation1.15E-02
68GO:0009826: unidimensional cell growth1.22E-02
69GO:0006970: response to osmotic stress1.32E-02
70GO:0009860: pollen tube growth1.32E-02
71GO:0048366: leaf development1.41E-02
72GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.50E-02
73GO:0016310: phosphorylation1.64E-02
74GO:0006886: intracellular protein transport1.70E-02
75GO:0009738: abscisic acid-activated signaling pathway2.83E-02
76GO:0009555: pollen development2.90E-02
77GO:0035556: intracellular signal transduction3.01E-02
78GO:0045893: positive regulation of transcription, DNA-templated3.20E-02
79GO:0042742: defense response to bacterium4.79E-02
80GO:0071555: cell wall organization4.79E-02
81GO:0006979: response to oxidative stress4.82E-02
RankGO TermAdjusted P value
1GO:0010857: calcium-dependent protein kinase activity0.00E+00
2GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity1.48E-05
3GO:0008728: GTP diphosphokinase activity3.88E-05
4GO:0047274: galactinol-sucrose galactosyltransferase activity6.95E-05
5GO:0015086: cadmium ion transmembrane transporter activity1.05E-04
6GO:0019199: transmembrane receptor protein kinase activity1.45E-04
7GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway1.45E-04
8GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity1.88E-04
9GO:0004674: protein serine/threonine kinase activity1.99E-04
10GO:0004430: 1-phosphatidylinositol 4-kinase activity4.37E-04
11GO:0005516: calmodulin binding6.09E-04
12GO:0005388: calcium-transporting ATPase activity7.91E-04
13GO:0019888: protein phosphatase regulator activity7.91E-04
14GO:0005524: ATP binding8.62E-04
15GO:0046982: protein heterodimerization activity1.04E-03
16GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.26E-03
17GO:0008536: Ran GTPase binding1.65E-03
18GO:0016301: kinase activity1.80E-03
19GO:0004518: nuclease activity1.98E-03
20GO:0009931: calcium-dependent protein serine/threonine kinase activity2.61E-03
21GO:0004683: calmodulin-dependent protein kinase activity2.70E-03
22GO:0050897: cobalt ion binding3.20E-03
23GO:0008270: zinc ion binding3.70E-03
24GO:0003779: actin binding6.18E-03
25GO:0016758: transferase activity, transferring hexosyl groups7.24E-03
26GO:0008565: protein transporter activity8.35E-03
27GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.09E-02
28GO:0042803: protein homodimerization activity1.72E-02
29GO:0004722: protein serine/threonine phosphatase activity1.77E-02
30GO:0016757: transferase activity, transferring glycosyl groups2.28E-02
31GO:0046872: metal ion binding2.48E-02
32GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.54E-02
33GO:0005525: GTP binding4.14E-02
34GO:0005509: calcium ion binding4.53E-02
35GO:0005515: protein binding4.70E-02
RankGO TermAdjusted P value
1GO:0030173: integral component of Golgi membrane2.82E-04
2GO:0000159: protein phosphatase type 2A complex6.67E-04
3GO:0030176: integral component of endoplasmic reticulum membrane9.19E-04
4GO:0000145: exocyst1.98E-03
5GO:0032580: Golgi cisterna membrane2.15E-03
6GO:0005778: peroxisomal membrane2.24E-03
7GO:0005643: nuclear pore2.90E-03
8GO:0000786: nucleosome3.30E-03
9GO:0016020: membrane3.96E-03
10GO:0005886: plasma membrane5.62E-03
11GO:0005768: endosome5.99E-03
12GO:0012505: endomembrane system6.18E-03
13GO:0043231: intracellular membrane-bounded organelle2.07E-02
14GO:0009506: plasmodesma2.27E-02
15GO:0005887: integral component of plasma membrane2.40E-02
16GO:0005777: peroxisome3.20E-02
17GO:0005802: trans-Golgi network4.06E-02
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Gene type



Gene DE type