co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G28380

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
2	GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process	0.00E+00
3	GO:0071289: cellular response to nickel ion	0.00E+00
4	GO:0080050: regulation of seed development	0.00E+00
5	GO:0042353: fucose biosynthetic process	0.00E+00
6	GO:0034775: glutathione transmembrane transport	0.00E+00
7	GO:0032497: detection of lipopolysaccharide	0.00E+00
8	GO:0006468: protein phosphorylation	5.23E-12
9	GO:0010200: response to chitin	2.65E-11
10	GO:0048544: recognition of pollen	5.21E-06
11	GO:0042344: indole glucosinolate catabolic process	6.26E-06
12	GO:0052544: defense response by callose deposition in cell wall	1.19E-05
13	GO:0006751: glutathione catabolic process	6.36E-05
14	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	8.84E-05
15	GO:0006955: immune response	1.18E-04
16	GO:0007165: signal transduction	1.44E-04
17	GO:0009865: pollen tube adhesion	1.88E-04
18	GO:0050691: regulation of defense response to virus by host	1.88E-04
19	GO:0006680: glucosylceramide catabolic process	1.88E-04
20	GO:0090421: embryonic meristem initiation	1.88E-04
21	GO:0046938: phytochelatin biosynthetic process	1.88E-04
22	GO:0006952: defense response	2.43E-04
23	GO:0042742: defense response to bacterium	3.55E-04
24	GO:0002221: pattern recognition receptor signaling pathway	4.24E-04
25	GO:0008616: queuosine biosynthetic process	4.24E-04
26	GO:0007000: nucleolus organization	4.24E-04
27	GO:0006898: receptor-mediated endocytosis	4.24E-04
28	GO:0070588: calcium ion transmembrane transport	6.12E-04
29	GO:0007166: cell surface receptor signaling pathway	6.50E-04
30	GO:0010359: regulation of anion channel activity	6.92E-04
31	GO:0010253: UDP-rhamnose biosynthetic process	6.92E-04
32	GO:0045793: positive regulation of cell size	6.92E-04
33	GO:0090630: activation of GTPase activity	6.92E-04
34	GO:0006598: polyamine catabolic process	6.92E-04
35	GO:0080168: abscisic acid transport	6.92E-04
36	GO:0051211: anisotropic cell growth	6.92E-04
37	GO:0000280: nuclear division	6.92E-04
38	GO:0016045: detection of bacterium	6.92E-04
39	GO:0009863: salicylic acid mediated signaling pathway	7.52E-04
40	GO:0034219: carbohydrate transmembrane transport	9.86E-04
41	GO:0030100: regulation of endocytosis	9.86E-04
42	GO:0015700: arsenite transport	9.86E-04
43	GO:0002679: respiratory burst involved in defense response	9.86E-04
44	GO:0033014: tetrapyrrole biosynthetic process	9.86E-04
45	GO:0015696: ammonium transport	9.86E-04
46	GO:1902347: response to strigolactone	1.31E-03
47	GO:0080142: regulation of salicylic acid biosynthetic process	1.31E-03
48	GO:0072488: ammonium transmembrane transport	1.31E-03
49	GO:0046777: protein autophosphorylation	1.56E-03
50	GO:0035556: intracellular signal transduction	1.60E-03
51	GO:0018105: peptidyl-serine phosphorylation	1.64E-03
52	GO:0009164: nucleoside catabolic process	1.66E-03
53	GO:0009823: cytokinin catabolic process	1.66E-03
54	GO:0010256: endomembrane system organization	2.05E-03
55	GO:0047484: regulation of response to osmotic stress	2.05E-03
56	GO:0010337: regulation of salicylic acid metabolic process	2.05E-03
57	GO:0080113: regulation of seed growth	2.46E-03
58	GO:1901001: negative regulation of response to salt stress	2.46E-03
59	GO:0016310: phosphorylation	2.58E-03
60	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.90E-03
61	GO:0010161: red light signaling pathway	2.90E-03
62	GO:0009690: cytokinin metabolic process	3.36E-03
63	GO:2000070: regulation of response to water deprivation	3.36E-03
64	GO:0045010: actin nucleation	3.36E-03
65	GO:1900150: regulation of defense response to fungus	3.36E-03
66	GO:0009932: cell tip growth	3.84E-03
67	GO:0009880: embryonic pattern specification	3.84E-03
68	GO:0010468: regulation of gene expression	3.95E-03
69	GO:0045087: innate immune response	4.26E-03
70	GO:0006783: heme biosynthetic process	4.35E-03
71	GO:0001708: cell fate specification	4.35E-03
72	GO:0098656: anion transmembrane transport	4.35E-03
73	GO:0046685: response to arsenic-containing substance	4.35E-03
74	GO:0051865: protein autoubiquitination	4.35E-03
75	GO:0090305: nucleic acid phosphodiester bond hydrolysis	4.35E-03
76	GO:0007346: regulation of mitotic cell cycle	4.87E-03
77	GO:0006779: porphyrin-containing compound biosynthetic process	4.87E-03
78	GO:0010018: far-red light signaling pathway	4.87E-03
79	GO:2000280: regulation of root development	4.87E-03
80	GO:0010192: mucilage biosynthetic process	5.42E-03
81	GO:0006782: protoporphyrinogen IX biosynthetic process	5.42E-03
82	GO:0019538: protein metabolic process	5.42E-03
83	GO:0010015: root morphogenesis	5.99E-03
84	GO:0009682: induced systemic resistance	5.99E-03
85	GO:0009737: response to abscisic acid	6.06E-03
86	GO:0009611: response to wounding	6.32E-03
87	GO:0006855: drug transmembrane transport	6.39E-03
88	GO:0010105: negative regulation of ethylene-activated signaling pathway	6.58E-03
89	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	6.58E-03
90	GO:0055046: microgametogenesis	7.19E-03
91	GO:0048467: gynoecium development	7.82E-03
92	GO:0002237: response to molecule of bacterial origin	7.82E-03
93	GO:0071732: cellular response to nitric oxide	8.47E-03
94	GO:0009969: xyloglucan biosynthetic process	8.47E-03
95	GO:0045454: cell redox homeostasis	9.09E-03
96	GO:0042753: positive regulation of circadian rhythm	9.14E-03
97	GO:0009626: plant-type hypersensitive response	9.31E-03
98	GO:0009624: response to nematode	1.05E-02
99	GO:0043622: cortical microtubule organization	1.05E-02
100	GO:0009742: brassinosteroid mediated signaling pathway	1.12E-02
101	GO:0016998: cell wall macromolecule catabolic process	1.13E-02
102	GO:0051321: meiotic cell cycle	1.13E-02
103	GO:0030245: cellulose catabolic process	1.20E-02
104	GO:0010017: red or far-red light signaling pathway	1.20E-02
105	GO:0035428: hexose transmembrane transport	1.20E-02
106	GO:0071369: cellular response to ethylene stimulus	1.28E-02
107	GO:0001944: vasculature development	1.28E-02
108	GO:0010089: xylem development	1.35E-02
109	GO:0010214: seed coat development	1.35E-02
110	GO:0010584: pollen exine formation	1.35E-02
111	GO:0006817: phosphate ion transport	1.35E-02
112	GO:0010091: trichome branching	1.35E-02
113	GO:0042147: retrograde transport, endosome to Golgi	1.43E-02
114	GO:0000271: polysaccharide biosynthetic process	1.51E-02
115	GO:0048868: pollen tube development	1.60E-02
116	GO:0046323: glucose import	1.60E-02
117	GO:0009960: endosperm development	1.60E-02
118	GO:0045489: pectin biosynthetic process	1.60E-02
119	GO:0006979: response to oxidative stress	1.80E-02
120	GO:0006891: intra-Golgi vesicle-mediated transport	1.85E-02
121	GO:1901657: glycosyl compound metabolic process	2.03E-02
122	GO:0071281: cellular response to iron ion	2.03E-02
123	GO:0006470: protein dephosphorylation	2.09E-02
124	GO:0019760: glucosinolate metabolic process	2.13E-02
125	GO:0009639: response to red or far red light	2.13E-02
126	GO:0009617: response to bacterium	2.18E-02
127	GO:0006904: vesicle docking involved in exocytosis	2.22E-02
128	GO:0000910: cytokinesis	2.31E-02
129	GO:0009738: abscisic acid-activated signaling pathway	2.35E-02
130	GO:0015995: chlorophyll biosynthetic process	2.71E-02
131	GO:0008219: cell death	2.91E-02
132	GO:0009817: defense response to fungus, incompatible interaction	2.91E-02
133	GO:0048481: plant ovule development	2.91E-02
134	GO:0006970: response to osmotic stress	3.04E-02
135	GO:0006810: transport	3.13E-02
136	GO:0016051: carbohydrate biosynthetic process	3.45E-02
137	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.62E-02
138	GO:0006887: exocytosis	3.89E-02
139	GO:0006897: endocytosis	3.89E-02
140	GO:0006631: fatty acid metabolic process	3.89E-02
141	GO:0045892: negative regulation of transcription, DNA-templated	4.25E-02
142	GO:0008643: carbohydrate transport	4.36E-02
143	GO:0000165: MAPK cascade	4.73E-02
144	GO:0031347: regulation of defense response	4.73E-02
145	GO:0009846: pollen germination	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
2	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
3	GO:0004698: calcium-dependent protein kinase C activity	0.00E+00
4	GO:0017048: Rho GTPase binding	0.00E+00
5	GO:0005522: profilin binding	0.00E+00
6	GO:0016301: kinase activity	3.43E-12
7	GO:0005524: ATP binding	3.01E-08
8	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	4.31E-08
9	GO:0003840: gamma-glutamyltransferase activity	6.26E-06
10	GO:0036374: glutathione hydrolase activity	6.26E-06
11	GO:0004672: protein kinase activity	7.40E-06
12	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.83E-05
13	GO:0005516: calmodulin binding	1.72E-04
14	GO:0052894: norspermine:oxygen oxidoreductase activity	1.88E-04
15	GO:0010489: UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity	1.88E-04
16	GO:0015085: calcium ion transmembrane transporter activity	1.88E-04
17	GO:0046870: cadmium ion binding	1.88E-04
18	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	1.88E-04
19	GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity	1.88E-04
20	GO:0090440: abscisic acid transporter activity	1.88E-04
21	GO:0010490: UDP-4-keto-rhamnose-4-keto-reductase activity	1.88E-04
22	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	1.88E-04
23	GO:0004348: glucosylceramidase activity	1.88E-04
24	GO:0071992: phytochelatin transmembrane transporter activity	1.88E-04
25	GO:0004683: calmodulin-dependent protein kinase activity	3.29E-04
26	GO:0017022: myosin binding	4.24E-04
27	GO:0004103: choline kinase activity	4.24E-04
28	GO:0008883: glutamyl-tRNA reductase activity	4.24E-04
29	GO:0008460: dTDP-glucose 4,6-dehydratase activity	4.24E-04
30	GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity	4.24E-04
31	GO:0010280: UDP-L-rhamnose synthase activity	4.24E-04
32	GO:0008479: queuine tRNA-ribosyltransferase activity	4.24E-04
33	GO:0050377: UDP-glucose 4,6-dehydratase activity	4.24E-04
34	GO:0019888: protein phosphatase regulator activity	4.86E-04
35	GO:0005388: calcium-transporting ATPase activity	4.86E-04
36	GO:0004674: protein serine/threonine kinase activity	5.25E-04
37	GO:0008131: primary amine oxidase activity	5.47E-04
38	GO:0030246: carbohydrate binding	6.09E-04
39	GO:0004383: guanylate cyclase activity	6.92E-04
40	GO:0046592: polyamine oxidase activity	6.92E-04
41	GO:0001653: peptide receptor activity	9.86E-04
42	GO:0048487: beta-tubulin binding	9.86E-04
43	GO:0008514: organic anion transmembrane transporter activity	1.16E-03
44	GO:0018685: alkane 1-monooxygenase activity	1.66E-03
45	GO:0047631: ADP-ribose diphosphatase activity	1.66E-03
46	GO:0019139: cytokinin dehydrogenase activity	1.66E-03
47	GO:0008519: ammonium transmembrane transporter activity	2.05E-03
48	GO:0000210: NAD+ diphosphatase activity	2.05E-03
49	GO:0019137: thioglucosidase activity	2.05E-03
50	GO:0051020: GTPase binding	2.46E-03
51	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.46E-03
52	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.88E-03
53	GO:0008143: poly(A) binding	2.90E-03
54	GO:0102483: scopolin beta-glucosidase activity	3.04E-03
55	GO:0015238: drug transmembrane transporter activity	3.53E-03
56	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.88E-03
57	GO:0008422: beta-glucosidase activity	4.64E-03
58	GO:0004713: protein tyrosine kinase activity	5.42E-03
59	GO:0035091: phosphatidylinositol binding	5.93E-03
60	GO:0005315: inorganic phosphate transmembrane transporter activity	7.19E-03
61	GO:0051119: sugar transmembrane transporter activity	8.47E-03
62	GO:0003779: actin binding	1.02E-02
63	GO:0008408: 3'-5' exonuclease activity	1.13E-02
64	GO:0004707: MAP kinase activity	1.13E-02
65	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.20E-02
66	GO:0005509: calcium ion binding	1.57E-02
67	GO:0015144: carbohydrate transmembrane transporter activity	1.58E-02
68	GO:0005355: glucose transmembrane transporter activity	1.68E-02
69	GO:0015297: antiporter activity	1.74E-02
70	GO:0005351: sugar:proton symporter activity	1.78E-02
71	GO:0051015: actin filament binding	2.03E-02
72	GO:0005215: transporter activity	2.06E-02
73	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.22E-02
74	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.22E-02
75	GO:0004721: phosphoprotein phosphatase activity	2.71E-02
76	GO:0005096: GTPase activator activity	3.02E-02
77	GO:0043531: ADP binding	3.10E-02
78	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.12E-02
79	GO:0043565: sequence-specific DNA binding	3.23E-02
80	GO:0050660: flavin adenine dinucleotide binding	3.27E-02
81	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.67E-02
82	GO:0050661: NADP binding	3.78E-02
83	GO:0004722: protein serine/threonine phosphatase activity	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.31E-08
2	GO:0005911: cell-cell junction	1.88E-04
3	GO:0070382: exocytic vesicle	1.88E-04
4	GO:0000159: protein phosphatase type 2A complex	3.73E-04
5	GO:0030133: transport vesicle	4.24E-04
6	GO:0019897: extrinsic component of plasma membrane	6.92E-04
7	GO:0070062: extracellular exosome	9.86E-04
8	GO:0045177: apical part of cell	9.86E-04
9	GO:0030173: integral component of Golgi membrane	2.46E-03
10	GO:0016021: integral component of membrane	2.73E-03
11	GO:0010494: cytoplasmic stress granule	4.35E-03
12	GO:0016604: nuclear body	4.87E-03
13	GO:0031902: late endosome membrane	5.05E-03
14	GO:0005938: cell cortex	7.19E-03
15	GO:0010008: endosome membrane	9.02E-03
16	GO:0012505: endomembrane system	1.02E-02
17	GO:0030136: clathrin-coated vesicle	1.43E-02
18	GO:0005768: endosome	1.51E-02
19	GO:0005770: late endosome	1.60E-02
20	GO:0000145: exocyst	1.94E-02
21	GO:0032580: Golgi cisterna membrane	2.13E-02
22	GO:0005778: peroxisomal membrane	2.22E-02
23	GO:0005777: peroxisome	2.91E-02
24	GO:0090406: pollen tube	4.13E-02
25	GO:0005622: intracellular	4.97E-02