co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G25425

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1904526: regulation of microtubule binding	0.00E+00
2	GO:0006633: fatty acid biosynthetic process	5.55E-10
3	GO:0042335: cuticle development	9.70E-08
4	GO:0009409: response to cold	6.01E-07
5	GO:0000038: very long-chain fatty acid metabolic process	6.90E-07
6	GO:0010025: wax biosynthetic process	2.15E-06
7	GO:0070417: cellular response to cold	6.75E-06
8	GO:0045926: negative regulation of growth	1.27E-05
9	GO:0080051: cutin transport	5.64E-05
10	GO:0009609: response to symbiotic bacterium	5.64E-05
11	GO:0009416: response to light stimulus	6.31E-05
12	GO:0030148: sphingolipid biosynthetic process	6.52E-05
13	GO:0031407: oxylipin metabolic process	1.37E-04
14	GO:0010289: homogalacturonan biosynthetic process	1.37E-04
15	GO:0015908: fatty acid transport	1.37E-04
16	GO:1901679: nucleotide transmembrane transport	1.37E-04
17	GO:0080121: AMP transport	2.34E-04
18	GO:0042631: cellular response to water deprivation	2.80E-04
19	GO:0045489: pectin biosynthetic process	3.02E-04
20	GO:0000302: response to reactive oxygen species	3.73E-04
21	GO:0010222: stem vascular tissue pattern formation	4.56E-04
22	GO:0022622: root system development	4.56E-04
23	GO:0006552: leucine catabolic process	4.56E-04
24	GO:0015867: ATP transport	4.56E-04
25	GO:0009611: response to wounding	5.23E-04
26	GO:0006665: sphingolipid metabolic process	5.78E-04
27	GO:0030244: cellulose biosynthetic process	6.92E-04
28	GO:0006574: valine catabolic process	7.07E-04
29	GO:0015866: ADP transport	7.07E-04
30	GO:0035435: phosphate ion transmembrane transport	7.07E-04
31	GO:0009913: epidermal cell differentiation	7.07E-04
32	GO:0009631: cold acclimation	7.96E-04
33	GO:0010555: response to mannitol	8.44E-04
34	GO:0009082: branched-chain amino acid biosynthetic process	8.44E-04
35	GO:0098655: cation transmembrane transport	8.44E-04
36	GO:1902074: response to salt	9.85E-04
37	GO:0032880: regulation of protein localization	9.85E-04
38	GO:0009610: response to symbiotic fungus	9.85E-04
39	GO:0030497: fatty acid elongation	9.85E-04
40	GO:0006631: fatty acid metabolic process	1.02E-03
41	GO:0009737: response to abscisic acid	1.03E-03
42	GO:2000070: regulation of response to water deprivation	1.13E-03
43	GO:0007155: cell adhesion	1.13E-03
44	GO:0008610: lipid biosynthetic process	1.13E-03
45	GO:0009819: drought recovery	1.13E-03
46	GO:0042255: ribosome assembly	1.13E-03
47	GO:0006353: DNA-templated transcription, termination	1.13E-03
48	GO:0009827: plant-type cell wall modification	1.29E-03
49	GO:0042538: hyperosmotic salinity response	1.37E-03
50	GO:0071555: cell wall organization	1.45E-03
51	GO:0010345: suberin biosynthetic process	1.45E-03
52	GO:0098656: anion transmembrane transport	1.45E-03
53	GO:0009809: lignin biosynthetic process	1.47E-03
54	GO:0042761: very long-chain fatty acid biosynthetic process	1.62E-03
55	GO:2000280: regulation of root development	1.62E-03
56	GO:0048367: shoot system development	1.78E-03
57	GO:0016024: CDP-diacylglycerol biosynthetic process	2.16E-03
58	GO:0009725: response to hormone	2.36E-03
59	GO:0010588: cotyledon vascular tissue pattern formation	2.36E-03
60	GO:2000012: regulation of auxin polar transport	2.36E-03
61	GO:0010143: cutin biosynthetic process	2.56E-03
62	GO:0070588: calcium ion transmembrane transport	2.76E-03
63	GO:0006636: unsaturated fatty acid biosynthetic process	2.97E-03
64	GO:0009833: plant-type primary cell wall biogenesis	2.97E-03
65	GO:0010150: leaf senescence	3.55E-03
66	GO:0009269: response to desiccation	3.63E-03
67	GO:0031408: oxylipin biosynthetic process	3.63E-03
68	GO:0006470: protein dephosphorylation	4.05E-03
69	GO:0001944: vasculature development	4.10E-03
70	GO:0019722: calcium-mediated signaling	4.34E-03
71	GO:0008284: positive regulation of cell proliferation	4.58E-03
72	GO:0000271: polysaccharide biosynthetic process	4.83E-03
73	GO:0000226: microtubule cytoskeleton organization	4.83E-03
74	GO:0009958: positive gravitropism	5.09E-03
75	GO:0006970: response to osmotic stress	5.89E-03
76	GO:0055114: oxidation-reduction process	5.92E-03
77	GO:0032502: developmental process	6.15E-03
78	GO:0010090: trichome morphogenesis	6.43E-03
79	GO:0007267: cell-cell signaling	7.00E-03
80	GO:0009414: response to water deprivation	7.23E-03
81	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	7.89E-03
82	GO:0009651: response to salt stress	9.12E-03
83	GO:0009832: plant-type cell wall biogenesis	9.45E-03
84	GO:0032259: methylation	9.58E-03
85	GO:0009834: plant-type secondary cell wall biogenesis	9.78E-03
86	GO:0006629: lipid metabolic process	1.00E-02
87	GO:0048527: lateral root development	1.01E-02
88	GO:0048364: root development	1.04E-02
89	GO:0016051: carbohydrate biosynthetic process	1.08E-02
90	GO:0006839: mitochondrial transport	1.18E-02
91	GO:0009873: ethylene-activated signaling pathway	1.29E-02
92	GO:0009744: response to sucrose	1.29E-02
93	GO:0051707: response to other organism	1.29E-02
94	GO:0009644: response to high light intensity	1.36E-02
95	GO:0051301: cell division	1.94E-02
96	GO:0042545: cell wall modification	2.00E-02
97	GO:0009624: response to nematode	2.04E-02
98	GO:0045490: pectin catabolic process	3.02E-02
99	GO:0007623: circadian rhythm	3.02E-02
100	GO:0009739: response to gibberellin	3.27E-02
101	GO:0008380: RNA splicing	3.42E-02
102	GO:0009826: unidimensional cell growth	4.01E-02
103	GO:0009658: chloroplast organization	4.12E-02
104	GO:0007049: cell cycle	4.45E-02
105	GO:0080167: response to karrikin	4.80E-02
106	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.91E-02
107	GO:0010200: response to chitin	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0052631: sphingolipid delta-8 desaturase activity	0.00E+00
2	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.50E-13
3	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.50E-13
4	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.50E-13
5	GO:0009922: fatty acid elongase activity	1.46E-08
6	GO:0070330: aromatase activity	7.23E-07
7	GO:0018685: alkane 1-monooxygenase activity	5.68E-06
8	GO:0016746: transferase activity, transferring acyl groups	1.06E-05
9	GO:0052747: sinapyl alcohol dehydrogenase activity	2.31E-05
10	GO:0015245: fatty acid transporter activity	5.64E-05
11	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.64E-05
12	GO:0016629: 12-oxophytodienoate reductase activity	1.37E-04
13	GO:0042389: omega-3 fatty acid desaturase activity	1.37E-04
14	GO:0017040: ceramidase activity	1.37E-04
15	GO:0052656: L-isoleucine transaminase activity	3.41E-04
16	GO:0052654: L-leucine transaminase activity	3.41E-04
17	GO:0052655: L-valine transaminase activity	3.41E-04
18	GO:0004084: branched-chain-amino-acid transaminase activity	4.56E-04
19	GO:0080122: AMP transmembrane transporter activity	5.78E-04
20	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	6.60E-04
21	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	7.07E-04
22	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	7.07E-04
23	GO:0015217: ADP transmembrane transporter activity	8.44E-04
24	GO:0005347: ATP transmembrane transporter activity	8.44E-04
25	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.29E-03
26	GO:0015114: phosphate ion transmembrane transporter activity	2.36E-03
27	GO:0005388: calcium-transporting ATPase activity	2.36E-03
28	GO:0008083: growth factor activity	2.56E-03
29	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	3.86E-03
30	GO:0016760: cellulose synthase (UDP-forming) activity	4.10E-03
31	GO:0003727: single-stranded RNA binding	4.34E-03
32	GO:0010181: FMN binding	5.35E-03
33	GO:0004872: receptor activity	5.61E-03
34	GO:0016759: cellulose synthase activity	6.71E-03
35	GO:0016791: phosphatase activity	6.71E-03
36	GO:0016413: O-acetyltransferase activity	7.29E-03
37	GO:0004722: protein serine/threonine phosphatase activity	8.90E-03
38	GO:0005096: GTPase activator activity	9.45E-03
39	GO:0043621: protein self-association	1.36E-02
40	GO:0008289: lipid binding	1.40E-02
41	GO:0003690: double-stranded DNA binding	1.63E-02
42	GO:0045330: aspartyl esterase activity	1.71E-02
43	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.83E-02
44	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.92E-02
45	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.92E-02
46	GO:0030599: pectinesterase activity	1.96E-02
47	GO:0016758: transferase activity, transferring hexosyl groups	2.35E-02
48	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.35E-02
49	GO:0019843: rRNA binding	2.40E-02
50	GO:0019825: oxygen binding	2.54E-02
51	GO:0005516: calmodulin binding	2.68E-02
52	GO:0016757: transferase activity, transferring glycosyl groups	3.49E-02
53	GO:0005506: iron ion binding	3.55E-02
54	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.58E-02
55	GO:0008168: methyltransferase activity	4.01E-02
56	GO:0016491: oxidoreductase activity	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	2.16E-05
2	GO:0005783: endoplasmic reticulum	2.88E-05
3	GO:0005789: endoplasmic reticulum membrane	9.89E-05
4	GO:0031357: integral component of chloroplast inner membrane	1.37E-04
5	GO:0042170: plastid membrane	1.37E-04
6	GO:0009897: external side of plasma membrane	2.34E-04
7	GO:0046658: anchored component of plasma membrane	5.78E-04
8	GO:0009505: plant-type cell wall	2.05E-03
9	GO:0009508: plastid chromosome	2.36E-03
10	GO:0009506: plasmodesma	2.62E-03
11	GO:0031225: anchored component of membrane	5.35E-03
12	GO:0005802: trans-Golgi network	5.54E-03
13	GO:0005768: endosome	6.52E-03
14	GO:0009295: nucleoid	7.00E-03
15	GO:0043231: intracellular membrane-bounded organelle	1.10E-02
16	GO:0005794: Golgi apparatus	1.48E-02
17	GO:0022626: cytosolic ribosome	1.70E-02
18	GO:0009706: chloroplast inner membrane	2.04E-02
19	GO:0005615: extracellular space	3.27E-02
20	GO:0000139: Golgi membrane	4.86E-02