co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G25390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006005: L-fucose biosynthetic process	0.00E+00
2	GO:0045730: respiratory burst	0.00E+00
3	GO:0032499: detection of peptidoglycan	0.00E+00
4	GO:2001143: N-methylnicotinate transport	0.00E+00
5	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
6	GO:1903086: negative regulation of sinapate ester biosynthetic process	0.00E+00
7	GO:2001142: nicotinate transport	0.00E+00
8	GO:0019427: acetyl-CoA biosynthetic process from acetate	0.00E+00
9	GO:0010200: response to chitin	9.07E-08
10	GO:0006468: protein phosphorylation	3.14E-07
11	GO:0002679: respiratory burst involved in defense response	3.91E-06
12	GO:0007166: cell surface receptor signaling pathway	8.42E-06
13	GO:0009808: lignin metabolic process	6.09E-05
14	GO:0051865: protein autoubiquitination	7.55E-05
15	GO:0003400: regulation of COPII vesicle coating	8.96E-05
16	GO:0080157: regulation of plant-type cell wall organization or biogenesis	8.96E-05
17	GO:0032491: detection of molecule of fungal origin	8.96E-05
18	GO:0006083: acetate metabolic process	8.96E-05
19	GO:0042350: GDP-L-fucose biosynthetic process	8.96E-05
20	GO:0006032: chitin catabolic process	1.10E-04
21	GO:0055046: microgametogenesis	1.73E-04
22	GO:0002221: pattern recognition receptor signaling pathway	2.12E-04
23	GO:0016998: cell wall macromolecule catabolic process	3.38E-04
24	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	3.54E-04
25	GO:0006817: phosphate ion transport	4.38E-04
26	GO:0071323: cellular response to chitin	5.10E-04
27	GO:0043207: response to external biotic stimulus	5.10E-04
28	GO:0002229: defense response to oomycetes	6.76E-04
29	GO:0071219: cellular response to molecule of bacterial origin	6.78E-04
30	GO:1902347: response to strigolactone	6.78E-04
31	GO:0080142: regulation of salicylic acid biosynthetic process	6.78E-04
32	GO:0045227: capsule polysaccharide biosynthetic process	6.78E-04
33	GO:0033358: UDP-L-arabinose biosynthetic process	6.78E-04
34	GO:0043484: regulation of RNA splicing	8.59E-04
35	GO:2000762: regulation of phenylpropanoid metabolic process	8.59E-04
36	GO:0008219: cell death	1.24E-03
37	GO:0009817: defense response to fungus, incompatible interaction	1.24E-03
38	GO:0098869: cellular oxidant detoxification	1.46E-03
39	GO:0006744: ubiquinone biosynthetic process	1.46E-03
40	GO:0006605: protein targeting	1.69E-03
41	GO:0045010: actin nucleation	1.69E-03
42	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.69E-03
43	GO:0010262: somatic embryogenesis	1.93E-03
44	GO:0009699: phenylpropanoid biosynthetic process	1.93E-03
45	GO:0009932: cell tip growth	1.93E-03
46	GO:0007064: mitotic sister chromatid cohesion	2.70E-03
47	GO:0019538: protein metabolic process	2.70E-03
48	GO:0000272: polysaccharide catabolic process	2.98E-03
49	GO:0009698: phenylpropanoid metabolic process	2.98E-03
50	GO:0015706: nitrate transport	3.26E-03
51	GO:0009753: response to jasmonic acid	3.52E-03
52	GO:0042742: defense response to bacterium	3.73E-03
53	GO:0016310: phosphorylation	3.94E-03
54	GO:0090351: seedling development	4.18E-03
55	GO:0009225: nucleotide-sugar metabolic process	4.18E-03
56	GO:0010167: response to nitrate	4.18E-03
57	GO:0080147: root hair cell development	4.83E-03
58	GO:0006952: defense response	5.15E-03
59	GO:0003333: amino acid transmembrane transport	5.52E-03
60	GO:0048511: rhythmic process	5.52E-03
61	GO:0098542: defense response to other organism	5.52E-03
62	GO:0040007: growth	6.23E-03
63	GO:0006012: galactose metabolic process	6.23E-03
64	GO:0071215: cellular response to abscisic acid stimulus	6.23E-03
65	GO:0009306: protein secretion	6.61E-03
66	GO:0009561: megagametogenesis	6.61E-03
67	GO:0009611: response to wounding	6.85E-03
68	GO:0006606: protein import into nucleus	7.37E-03
69	GO:0042631: cellular response to water deprivation	7.37E-03
70	GO:0010197: polar nucleus fusion	7.77E-03
71	GO:0009617: response to bacterium	7.79E-03
72	GO:0032502: developmental process	9.42E-03
73	GO:0006904: vesicle docking involved in exocytosis	1.07E-02
74	GO:0016579: protein deubiquitination	1.12E-02
75	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.21E-02
76	GO:0009816: defense response to bacterium, incompatible interaction	1.21E-02
77	GO:0080167: response to karrikin	1.25E-02
78	GO:0042128: nitrate assimilation	1.26E-02
79	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.30E-02
80	GO:0048573: photoperiodism, flowering	1.31E-02
81	GO:0006888: ER to Golgi vesicle-mediated transport	1.31E-02
82	GO:0016049: cell growth	1.36E-02
83	GO:0010119: regulation of stomatal movement	1.56E-02
84	GO:0006865: amino acid transport	1.61E-02
85	GO:0006979: response to oxidative stress	1.65E-02
86	GO:0045087: innate immune response	1.66E-02
87	GO:0006839: mitochondrial transport	1.82E-02
88	GO:0006887: exocytosis	1.88E-02
89	GO:0006631: fatty acid metabolic process	1.88E-02
90	GO:0050832: defense response to fungus	1.93E-02
91	GO:0016567: protein ubiquitination	2.00E-02
92	GO:0009664: plant-type cell wall organization	2.34E-02
93	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.46E-02
94	GO:0010224: response to UV-B	2.52E-02
95	GO:0009626: plant-type hypersensitive response	2.90E-02
96	GO:0006396: RNA processing	3.23E-02
97	GO:0009742: brassinosteroid mediated signaling pathway	3.30E-02
98	GO:0009845: seed germination	3.92E-02
99	GO:0042744: hydrogen peroxide catabolic process	4.07E-02
100	GO:0055085: transmembrane transport	4.17E-02
101	GO:0016036: cellular response to phosphate starvation	4.44E-02
102	GO:0010150: leaf senescence	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:2001080: chitosan binding	0.00E+00
2	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
3	GO:0090416: nicotinate transporter activity	0.00E+00
4	GO:0005522: profilin binding	0.00E+00
5	GO:0016710: trans-cinnamate 4-monooxygenase activity	0.00E+00
6	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
7	GO:0016301: kinase activity	8.52E-08
8	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.05E-06
9	GO:0004674: protein serine/threonine kinase activity	7.82E-05
10	GO:0005524: ATP binding	7.98E-05
11	GO:0005090: Sar guanyl-nucleotide exchange factor activity	8.96E-05
12	GO:0031219: levanase activity	8.96E-05
13	GO:0050577: GDP-L-fucose synthase activity	8.96E-05
14	GO:0003987: acetate-CoA ligase activity	8.96E-05
15	GO:0051669: fructan beta-fructosidase activity	8.96E-05
16	GO:0004568: chitinase activity	1.10E-04
17	GO:1990585: hydroxyproline O-arabinosyltransferase activity	2.12E-04
18	GO:0008061: chitin binding	2.22E-04
19	GO:0033612: receptor serine/threonine kinase binding	3.38E-04
20	GO:0050373: UDP-arabinose 4-epimerase activity	6.78E-04
21	GO:0019199: transmembrane receptor protein kinase activity	6.78E-04
22	GO:0047631: ADP-ribose diphosphatase activity	8.59E-04
23	GO:0016208: AMP binding	1.05E-03
24	GO:0004656: procollagen-proline 4-dioxygenase activity	1.25E-03
25	GO:0051020: GTPase binding	1.25E-03
26	GO:0003978: UDP-glucose 4-epimerase activity	1.25E-03
27	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.42E-03
28	GO:0008143: poly(A) binding	1.46E-03
29	GO:0004525: ribonuclease III activity	1.69E-03
30	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.69E-03
31	GO:0015112: nitrate transmembrane transporter activity	2.43E-03
32	GO:0008139: nuclear localization sequence binding	3.56E-03
33	GO:0031418: L-ascorbic acid binding	4.83E-03
34	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	5.52E-03
35	GO:0004842: ubiquitin-protein transferase activity	6.09E-03
36	GO:0022891: substrate-specific transmembrane transporter activity	6.23E-03
37	GO:0004672: protein kinase activity	6.68E-03
38	GO:0005102: receptor binding	6.99E-03
39	GO:0008536: Ran GTPase binding	7.77E-03
40	GO:0050662: coenzyme binding	8.17E-03
41	GO:0016853: isomerase activity	8.17E-03
42	GO:0019901: protein kinase binding	8.58E-03
43	GO:0004843: thiol-dependent ubiquitin-specific protease activity	8.99E-03
44	GO:0051015: actin filament binding	9.85E-03
45	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.07E-02
46	GO:0005516: calmodulin binding	1.12E-02
47	GO:0016597: amino acid binding	1.12E-02
48	GO:0050660: flavin adenine dinucleotide binding	1.17E-02
49	GO:0030247: polysaccharide binding	1.31E-02
50	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.41E-02
51	GO:0043565: sequence-specific DNA binding	1.41E-02
52	GO:0005096: GTPase activator activity	1.46E-02
53	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.50E-02
54	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.66E-02
55	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	1.67E-02
56	GO:0009055: electron carrier activity	1.99E-02
57	GO:0015171: amino acid transmembrane transporter activity	2.65E-02
58	GO:0022857: transmembrane transporter activity	3.03E-02
59	GO:0003779: actin binding	3.10E-02
60	GO:0015144: carbohydrate transmembrane transporter activity	4.22E-02
61	GO:0008565: protein transporter activity	4.22E-02
62	GO:0005351: sugar:proton symporter activity	4.59E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.66E-07
2	GO:0016021: integral component of membrane	3.12E-05
3	GO:0005911: cell-cell junction	8.96E-05
4	GO:0009514: glyoxysome	1.93E-03
5	GO:0010494: cytoplasmic stress granule	2.18E-03
6	GO:0090404: pollen tube tip	2.98E-03
7	GO:0030176: integral component of endoplasmic reticulum membrane	4.18E-03
8	GO:0043234: protein complex	4.50E-03
9	GO:0005770: late endosome	7.77E-03
10	GO:0031965: nuclear membrane	8.58E-03
11	GO:0005618: cell wall	9.10E-03
12	GO:0000145: exocyst	9.42E-03
13	GO:0032580: Golgi cisterna membrane	1.03E-02
14	GO:0005576: extracellular region	1.95E-02
15	GO:0090406: pollen tube	1.99E-02
16	GO:0009505: plant-type cell wall	2.17E-02
17	GO:0031966: mitochondrial membrane	2.34E-02
18	GO:0010008: endosome membrane	2.84E-02