co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G24575

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
2	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
3	GO:0023052: signaling	0.00E+00
4	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
5	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
6	GO:0001881: receptor recycling	0.00E+00
7	GO:0042430: indole-containing compound metabolic process	0.00E+00
8	GO:0070207: protein homotrimerization	0.00E+00
9	GO:1903647: negative regulation of chlorophyll catabolic process	0.00E+00
10	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
11	GO:0080184: response to phenylpropanoid	0.00E+00
12	GO:0030149: sphingolipid catabolic process	0.00E+00
13	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
14	GO:0006412: translation	2.88E-09
15	GO:0042744: hydrogen peroxide catabolic process	2.72E-06
16	GO:0042254: ribosome biogenesis	2.21E-05
17	GO:0055114: oxidation-reduction process	5.64E-05
18	GO:0009651: response to salt stress	7.67E-05
19	GO:0009735: response to cytokinin	8.46E-05
20	GO:0043248: proteasome assembly	1.60E-04
21	GO:0009853: photorespiration	1.92E-04
22	GO:0006511: ubiquitin-dependent protein catabolic process	2.60E-04
23	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	2.83E-04
24	GO:1901349: glucosinolate transport	3.34E-04
25	GO:0015798: myo-inositol transport	3.34E-04
26	GO:1990542: mitochondrial transmembrane transport	3.34E-04
27	GO:0090449: phloem glucosinolate loading	3.34E-04
28	GO:0009852: auxin catabolic process	3.34E-04
29	GO:0010365: positive regulation of ethylene biosynthetic process	3.34E-04
30	GO:0042964: thioredoxin reduction	3.34E-04
31	GO:0051603: proteolysis involved in cellular protein catabolic process	5.00E-04
32	GO:0015786: UDP-glucose transport	7.29E-04
33	GO:0019752: carboxylic acid metabolic process	7.29E-04
34	GO:0006452: translational frameshifting	7.29E-04
35	GO:0009915: phloem sucrose loading	7.29E-04
36	GO:0045905: positive regulation of translational termination	7.29E-04
37	GO:0051788: response to misfolded protein	7.29E-04
38	GO:0045901: positive regulation of translational elongation	7.29E-04
39	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	7.29E-04
40	GO:0006820: anion transport	9.49E-04
41	GO:0002181: cytoplasmic translation	1.18E-03
42	GO:0045793: positive regulation of cell size	1.18E-03
43	GO:0008333: endosome to lysosome transport	1.18E-03
44	GO:0015783: GDP-fucose transport	1.18E-03
45	GO:0034227: tRNA thio-modification	1.18E-03
46	GO:0010043: response to zinc ion	1.28E-03
47	GO:0006168: adenine salvage	1.70E-03
48	GO:0071786: endoplasmic reticulum tubular network organization	1.70E-03
49	GO:0072334: UDP-galactose transmembrane transport	1.70E-03
50	GO:0001676: long-chain fatty acid metabolic process	1.70E-03
51	GO:0032877: positive regulation of DNA endoreduplication	1.70E-03
52	GO:0046836: glycolipid transport	1.70E-03
53	GO:0009413: response to flooding	1.70E-03
54	GO:0009647: skotomorphogenesis	1.70E-03
55	GO:0006166: purine ribonucleoside salvage	1.70E-03
56	GO:0048511: rhythmic process	2.02E-03
57	GO:0010363: regulation of plant-type hypersensitive response	2.28E-03
58	GO:0051781: positive regulation of cell division	2.28E-03
59	GO:0032366: intracellular sterol transport	2.28E-03
60	GO:0006979: response to oxidative stress	2.32E-03
61	GO:0006564: L-serine biosynthetic process	2.91E-03
62	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.91E-03
63	GO:0009697: salicylic acid biosynthetic process	2.91E-03
64	GO:0044209: AMP salvage	2.91E-03
65	GO:1902183: regulation of shoot apical meristem development	2.91E-03
66	GO:0015991: ATP hydrolysis coupled proton transport	3.06E-03
67	GO:0002238: response to molecule of fungal origin	3.60E-03
68	GO:0000302: response to reactive oxygen species	4.08E-03
69	GO:0010193: response to ozone	4.08E-03
70	GO:0009955: adaxial/abaxial pattern specification	4.33E-03
71	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.33E-03
72	GO:0010189: vitamin E biosynthetic process	4.33E-03
73	GO:0009554: megasporogenesis	4.33E-03
74	GO:0009648: photoperiodism	4.33E-03
75	GO:1900056: negative regulation of leaf senescence	5.11E-03
76	GO:0032880: regulation of protein localization	5.11E-03
77	GO:0048528: post-embryonic root development	5.11E-03
78	GO:0009690: cytokinin metabolic process	5.94E-03
79	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.94E-03
80	GO:0009642: response to light intensity	5.94E-03
81	GO:0048658: anther wall tapetum development	5.94E-03
82	GO:0031540: regulation of anthocyanin biosynthetic process	5.94E-03
83	GO:0006102: isocitrate metabolic process	5.94E-03
84	GO:0006506: GPI anchor biosynthetic process	5.94E-03
85	GO:0046686: response to cadmium ion	5.98E-03
86	GO:0019430: removal of superoxide radicals	6.81E-03
87	GO:0006972: hyperosmotic response	6.81E-03
88	GO:0006869: lipid transport	7.60E-03
89	GO:0034765: regulation of ion transmembrane transport	7.73E-03
90	GO:0009245: lipid A biosynthetic process	7.73E-03
91	GO:0015780: nucleotide-sugar transport	7.73E-03
92	GO:0080144: amino acid homeostasis	7.73E-03
93	GO:0098656: anion transmembrane transport	7.73E-03
94	GO:0030042: actin filament depolymerization	8.68E-03
95	GO:0048354: mucilage biosynthetic process involved in seed coat development	8.68E-03
96	GO:0006032: chitin catabolic process	9.69E-03
97	GO:0043069: negative regulation of programmed cell death	9.69E-03
98	GO:0010192: mucilage biosynthetic process	9.69E-03
99	GO:0006099: tricarboxylic acid cycle	1.02E-02
100	GO:0000272: polysaccharide catabolic process	1.07E-02
101	GO:0015770: sucrose transport	1.07E-02
102	GO:0072593: reactive oxygen species metabolic process	1.07E-02
103	GO:0009617: response to bacterium	1.14E-02
104	GO:0006631: fatty acid metabolic process	1.16E-02
105	GO:0012501: programmed cell death	1.18E-02
106	GO:0008361: regulation of cell size	1.18E-02
107	GO:0006626: protein targeting to mitochondrion	1.29E-02
108	GO:0006006: glucose metabolic process	1.29E-02
109	GO:0007034: vacuolar transport	1.41E-02
110	GO:0002237: response to molecule of bacterial origin	1.41E-02
111	GO:0009266: response to temperature stimulus	1.41E-02
112	GO:0009636: response to toxic substance	1.42E-02
113	GO:0006855: drug transmembrane transport	1.48E-02
114	GO:0042343: indole glucosinolate metabolic process	1.53E-02
115	GO:0031347: regulation of defense response	1.53E-02
116	GO:0007030: Golgi organization	1.53E-02
117	GO:0009901: anther dehiscence	1.53E-02
118	GO:0000162: tryptophan biosynthetic process	1.65E-02
119	GO:0006636: unsaturated fatty acid biosynthetic process	1.65E-02
120	GO:0009116: nucleoside metabolic process	1.77E-02
121	GO:0006406: mRNA export from nucleus	1.77E-02
122	GO:0006289: nucleotide-excision repair	1.77E-02
123	GO:2000377: regulation of reactive oxygen species metabolic process	1.77E-02
124	GO:0006487: protein N-linked glycosylation	1.77E-02
125	GO:0009909: regulation of flower development	1.89E-02
126	GO:0006096: glycolytic process	2.02E-02
127	GO:0061077: chaperone-mediated protein folding	2.03E-02
128	GO:0015992: proton transport	2.03E-02
129	GO:0098542: defense response to other organism	2.03E-02
130	GO:0010431: seed maturation	2.03E-02
131	GO:0051260: protein homooligomerization	2.03E-02
132	GO:0030245: cellulose catabolic process	2.17E-02
133	GO:0007005: mitochondrion organization	2.17E-02
134	GO:0016226: iron-sulfur cluster assembly	2.17E-02
135	GO:0035428: hexose transmembrane transport	2.17E-02
136	GO:0009625: response to insect	2.31E-02
137	GO:0044550: secondary metabolite biosynthetic process	2.32E-02
138	GO:0009624: response to nematode	2.43E-02
139	GO:0010584: pollen exine formation	2.45E-02
140	GO:0006817: phosphate ion transport	2.45E-02
141	GO:0010089: xylem development	2.45E-02
142	GO:0042147: retrograde transport, endosome to Golgi	2.60E-02
143	GO:0045454: cell redox homeostasis	2.61E-02
144	GO:0042631: cellular response to water deprivation	2.74E-02
145	GO:0080022: primary root development	2.74E-02
146	GO:0034220: ion transmembrane transport	2.74E-02
147	GO:0000413: protein peptidyl-prolyl isomerization	2.74E-02
148	GO:0010118: stomatal movement	2.74E-02
149	GO:0042391: regulation of membrane potential	2.74E-02
150	GO:0046323: glucose import	2.89E-02
151	GO:0006520: cellular amino acid metabolic process	2.89E-02
152	GO:0015986: ATP synthesis coupled proton transport	3.05E-02
153	GO:0048825: cotyledon development	3.20E-02
154	GO:0006623: protein targeting to vacuole	3.20E-02
155	GO:0009793: embryo development ending in seed dormancy	3.52E-02
156	GO:0009630: gravitropism	3.52E-02
157	GO:0030163: protein catabolic process	3.69E-02
158	GO:0006914: autophagy	3.85E-02
159	GO:0010252: auxin homeostasis	3.85E-02
160	GO:0006413: translational initiation	3.91E-02
161	GO:0071805: potassium ion transmembrane transport	4.02E-02
162	GO:0006810: transport	4.05E-02
163	GO:0000910: cytokinesis	4.19E-02
164	GO:0007623: circadian rhythm	4.19E-02
165	GO:0009607: response to biotic stimulus	4.54E-02
166	GO:0009739: response to gibberellin	4.68E-02
167	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
2	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
3	GO:0003796: lysozyme activity	0.00E+00
4	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
5	GO:0008752: FMN reductase activity	0.00E+00
6	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
7	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
8	GO:0003735: structural constituent of ribosome	5.03E-14
9	GO:0004298: threonine-type endopeptidase activity	2.19E-07
10	GO:0020037: heme binding	1.15E-05
11	GO:0004601: peroxidase activity	2.09E-05
12	GO:0008233: peptidase activity	2.41E-04
13	GO:0070401: NADP+ binding	3.34E-04
14	GO:0090448: glucosinolate:proton symporter activity	3.34E-04
15	GO:0004048: anthranilate phosphoribosyltransferase activity	3.34E-04
16	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	3.34E-04
17	GO:0016229: steroid dehydrogenase activity	3.34E-04
18	GO:0019786: Atg8-specific protease activity	3.34E-04
19	GO:0015288: porin activity	3.55E-04
20	GO:0008308: voltage-gated anion channel activity	4.36E-04
21	GO:0045309: protein phosphorylated amino acid binding	6.19E-04
22	GO:0005366: myo-inositol:proton symporter activity	7.29E-04
23	GO:0008517: folic acid transporter activity	7.29E-04
24	GO:0019779: Atg8 activating enzyme activity	7.29E-04
25	GO:0004617: phosphoglycerate dehydrogenase activity	7.29E-04
26	GO:0004047: aminomethyltransferase activity	7.29E-04
27	GO:0047517: 1,4-beta-D-xylan synthase activity	7.29E-04
28	GO:0019904: protein domain specific binding	8.32E-04
29	GO:0046961: proton-transporting ATPase activity, rotational mechanism	8.32E-04
30	GO:0004129: cytochrome-c oxidase activity	8.32E-04
31	GO:0008794: arsenate reductase (glutaredoxin) activity	8.32E-04
32	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.18E-03
33	GO:0005457: GDP-fucose transmembrane transporter activity	1.18E-03
34	GO:0017077: oxidative phosphorylation uncoupler activity	1.70E-03
35	GO:0005460: UDP-glucose transmembrane transporter activity	1.70E-03
36	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.70E-03
37	GO:0017089: glycolipid transporter activity	1.70E-03
38	GO:0003999: adenine phosphoribosyltransferase activity	1.70E-03
39	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.70E-03
40	GO:0050302: indole-3-acetaldehyde oxidase activity	2.28E-03
41	GO:0004576: oligosaccharyl transferase activity	2.28E-03
42	GO:0019776: Atg8 ligase activity	2.28E-03
43	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	2.28E-03
44	GO:0004659: prenyltransferase activity	2.28E-03
45	GO:0070628: proteasome binding	2.28E-03
46	GO:0010011: auxin binding	2.28E-03
47	GO:0051861: glycolipid binding	2.28E-03
48	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.41E-03
49	GO:0051287: NAD binding	2.52E-03
50	GO:0005459: UDP-galactose transmembrane transporter activity	2.91E-03
51	GO:0005496: steroid binding	2.91E-03
52	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.91E-03
53	GO:0004866: endopeptidase inhibitor activity	3.60E-03
54	GO:0031593: polyubiquitin binding	3.60E-03
55	GO:0031177: phosphopantetheine binding	3.60E-03
56	GO:0000035: acyl binding	4.33E-03
57	GO:0004656: procollagen-proline 4-dioxygenase activity	4.33E-03
58	GO:0102391: decanoate--CoA ligase activity	4.33E-03
59	GO:0005242: inward rectifier potassium channel activity	4.33E-03
60	GO:0016831: carboxy-lyase activity	5.11E-03
61	GO:0005338: nucleotide-sugar transmembrane transporter activity	5.11E-03
62	GO:0008121: ubiquinol-cytochrome-c reductase activity	5.11E-03
63	GO:0004467: long-chain fatty acid-CoA ligase activity	5.11E-03
64	GO:0043022: ribosome binding	5.94E-03
65	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	5.94E-03
66	GO:0004033: aldo-keto reductase (NADP) activity	5.94E-03
67	GO:0052747: sinapyl alcohol dehydrogenase activity	5.94E-03
68	GO:0019843: rRNA binding	6.03E-03
69	GO:0000989: transcription factor activity, transcription factor binding	7.73E-03
70	GO:0004743: pyruvate kinase activity	8.68E-03
71	GO:0030955: potassium ion binding	8.68E-03
72	GO:0004568: chitinase activity	9.69E-03
73	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	9.77E-03
74	GO:0003746: translation elongation factor activity	9.77E-03
75	GO:0008559: xenobiotic-transporting ATPase activity	1.07E-02
76	GO:0008515: sucrose transmembrane transporter activity	1.07E-02
77	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.18E-02
78	GO:0004364: glutathione transferase activity	1.21E-02
79	GO:0004089: carbonate dehydratase activity	1.29E-02
80	GO:0008289: lipid binding	1.50E-02
81	GO:0051119: sugar transmembrane transporter activity	1.53E-02
82	GO:0003729: mRNA binding	1.54E-02
83	GO:0043130: ubiquitin binding	1.77E-02
84	GO:0005528: FK506 binding	1.77E-02
85	GO:0008134: transcription factor binding	1.77E-02
86	GO:0031418: L-ascorbic acid binding	1.77E-02
87	GO:0008810: cellulase activity	2.31E-02
88	GO:0008514: organic anion transmembrane transporter activity	2.45E-02
89	GO:0015035: protein disulfide oxidoreductase activity	2.51E-02
90	GO:0030551: cyclic nucleotide binding	2.74E-02
91	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.88E-02
92	GO:0005199: structural constituent of cell wall	2.89E-02
93	GO:0010181: FMN binding	3.05E-02
94	GO:0005355: glucose transmembrane transporter activity	3.05E-02
95	GO:0004791: thioredoxin-disulfide reductase activity	3.05E-02
96	GO:0004872: receptor activity	3.20E-02
97	GO:0046872: metal ion binding	3.25E-02
98	GO:0005507: copper ion binding	3.62E-02
99	GO:0009055: electron carrier activity	3.70E-02
100	GO:0003684: damaged DNA binding	3.85E-02
101	GO:0005351: sugar:proton symporter activity	4.10E-02
102	GO:0016597: amino acid binding	4.19E-02
103	GO:0051213: dioxygenase activity	4.37E-02
104	GO:0015250: water channel activity	4.37E-02
105	GO:0003743: translation initiation factor activity	4.89E-02
106	GO:0004721: phosphoprotein phosphatase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0022625: cytosolic large ribosomal subunit	2.14E-14
2	GO:0005774: vacuolar membrane	1.03E-11
3	GO:0000502: proteasome complex	1.18E-11
4	GO:0022626: cytosolic ribosome	1.92E-09
5	GO:0005840: ribosome	2.72E-09
6	GO:0005773: vacuole	2.02E-08
7	GO:0005839: proteasome core complex	2.19E-07
8	GO:0015934: large ribosomal subunit	5.89E-07
9	GO:0005829: cytosol	2.93E-06
10	GO:0016020: membrane	9.82E-06
11	GO:0005783: endoplasmic reticulum	1.57E-05
12	GO:0009506: plasmodesma	5.52E-05
13	GO:0045271: respiratory chain complex I	1.60E-04
14	GO:0009510: plasmodesmatal desmotubule	3.34E-04
15	GO:0046930: pore complex	4.36E-04
16	GO:0005618: cell wall	4.48E-04
17	GO:0022627: cytosolic small ribosomal subunit	6.06E-04
18	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	7.29E-04
19	GO:0005788: endoplasmic reticulum lumen	8.20E-04
20	GO:0008541: proteasome regulatory particle, lid subcomplex	8.32E-04
21	GO:0005737: cytoplasm	1.16E-03
22	GO:0046861: glyoxysomal membrane	1.18E-03
23	GO:0005750: mitochondrial respiratory chain complex III	1.21E-03
24	GO:0000325: plant-type vacuole	1.28E-03
25	GO:0005753: mitochondrial proton-transporting ATP synthase complex	1.35E-03
26	GO:0005758: mitochondrial intermembrane space	1.66E-03
27	GO:0071782: endoplasmic reticulum tubular network	1.70E-03
28	GO:0033180: proton-transporting V-type ATPase, V1 domain	1.70E-03
29	GO:0005775: vacuolar lumen	1.70E-03
30	GO:0070469: respiratory chain	1.84E-03
31	GO:0005741: mitochondrial outer membrane	2.02E-03
32	GO:0005776: autophagosome	2.28E-03
33	GO:0016471: vacuolar proton-transporting V-type ATPase complex	2.28E-03
34	GO:0031966: mitochondrial membrane	2.64E-03
35	GO:0008250: oligosaccharyltransferase complex	2.91E-03
36	GO:0055035: plastid thylakoid membrane	2.91E-03
37	GO:0005746: mitochondrial respiratory chain	2.91E-03
38	GO:0005886: plasma membrane	3.50E-03
39	GO:0030904: retromer complex	3.60E-03
40	GO:0005771: multivesicular body	3.60E-03
41	GO:0005747: mitochondrial respiratory chain complex I	3.73E-03
42	GO:0005794: Golgi apparatus	5.55E-03
43	GO:0045273: respiratory chain complex II	5.94E-03
44	GO:0000421: autophagosome membrane	5.94E-03
45	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	5.94E-03
46	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	5.94E-03
47	GO:0019773: proteasome core complex, alpha-subunit complex	6.81E-03
48	GO:0009514: glyoxysome	6.81E-03
49	GO:0005730: nucleolus	7.15E-03
50	GO:0031090: organelle membrane	7.73E-03
51	GO:0005759: mitochondrial matrix	8.07E-03
52	GO:0005740: mitochondrial envelope	9.69E-03
53	GO:0009536: plastid	1.06E-02
54	GO:0031410: cytoplasmic vesicle	2.17E-02
55	GO:0015629: actin cytoskeleton	2.31E-02
56	GO:0005777: peroxisome	2.64E-02
57	GO:0009504: cell plate	3.20E-02
58	GO:0009507: chloroplast	3.93E-02
59	GO:0005789: endoplasmic reticulum membrane	4.32E-02
60	GO:0005887: integral component of plasma membrane	4.93E-02