GO Enrichment Analysis of Co-expressed Genes with
AT1G24267
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043201: response to leucine | 0.00E+00 |
| 2 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 3 | GO:0080052: response to histidine | 0.00E+00 |
| 4 | GO:0080053: response to phenylalanine | 0.00E+00 |
| 5 | GO:0033587: shikimate biosynthetic process | 0.00E+00 |
| 6 | GO:0048867: stem cell fate determination | 0.00E+00 |
| 7 | GO:0009423: chorismate biosynthetic process | 1.16E-05 |
| 8 | GO:0006099: tricarboxylic acid cycle | 4.99E-05 |
| 9 | GO:0043547: positive regulation of GTPase activity | 5.34E-05 |
| 10 | GO:0006007: glucose catabolic process | 5.34E-05 |
| 11 | GO:0009968: negative regulation of signal transduction | 5.34E-05 |
| 12 | GO:0009073: aromatic amino acid family biosynthetic process | 5.99E-05 |
| 13 | GO:0051262: protein tetramerization | 1.30E-04 |
| 14 | GO:0034470: ncRNA processing | 1.30E-04 |
| 15 | GO:0019632: shikimate metabolic process | 1.30E-04 |
| 16 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.30E-04 |
| 17 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.30E-04 |
| 18 | GO:0042939: tripeptide transport | 1.30E-04 |
| 19 | GO:0080009: mRNA methylation | 1.30E-04 |
| 20 | GO:0006556: S-adenosylmethionine biosynthetic process | 2.22E-04 |
| 21 | GO:0001676: long-chain fatty acid metabolic process | 3.25E-04 |
| 22 | GO:0033356: UDP-L-arabinose metabolic process | 4.35E-04 |
| 23 | GO:0000460: maturation of 5.8S rRNA | 4.35E-04 |
| 24 | GO:0042938: dipeptide transport | 4.35E-04 |
| 25 | GO:0046686: response to cadmium ion | 5.26E-04 |
| 26 | GO:0006564: L-serine biosynthetic process | 5.52E-04 |
| 27 | GO:0000470: maturation of LSU-rRNA | 6.76E-04 |
| 28 | GO:0015977: carbon fixation | 8.05E-04 |
| 29 | GO:0071669: plant-type cell wall organization or biogenesis | 9.40E-04 |
| 30 | GO:0051707: response to other organism | 1.03E-03 |
| 31 | GO:0006102: isocitrate metabolic process | 1.08E-03 |
| 32 | GO:0006875: cellular metal ion homeostasis | 1.08E-03 |
| 33 | GO:0022900: electron transport chain | 1.23E-03 |
| 34 | GO:0006098: pentose-phosphate shunt | 1.38E-03 |
| 35 | GO:0006754: ATP biosynthetic process | 1.38E-03 |
| 36 | GO:0006857: oligopeptide transport | 1.46E-03 |
| 37 | GO:0009086: methionine biosynthetic process | 1.54E-03 |
| 38 | GO:0006096: glycolytic process | 1.61E-03 |
| 39 | GO:0009651: response to salt stress | 2.01E-03 |
| 40 | GO:0010152: pollen maturation | 2.06E-03 |
| 41 | GO:0006108: malate metabolic process | 2.25E-03 |
| 42 | GO:0009555: pollen development | 2.78E-03 |
| 43 | GO:0006413: translational initiation | 3.08E-03 |
| 44 | GO:0016036: cellular response to phosphate starvation | 3.08E-03 |
| 45 | GO:0010073: meristem maintenance | 3.24E-03 |
| 46 | GO:0006874: cellular calcium ion homeostasis | 3.24E-03 |
| 47 | GO:0010150: leaf senescence | 3.30E-03 |
| 48 | GO:0080092: regulation of pollen tube growth | 3.68E-03 |
| 49 | GO:0006730: one-carbon metabolic process | 3.68E-03 |
| 50 | GO:0016226: iron-sulfur cluster assembly | 3.68E-03 |
| 51 | GO:0009693: ethylene biosynthetic process | 3.90E-03 |
| 52 | GO:0009561: megagametogenesis | 4.13E-03 |
| 53 | GO:0042127: regulation of cell proliferation | 4.13E-03 |
| 54 | GO:0010118: stomatal movement | 4.60E-03 |
| 55 | GO:0015991: ATP hydrolysis coupled proton transport | 4.60E-03 |
| 56 | GO:0009793: embryo development ending in seed dormancy | 4.65E-03 |
| 57 | GO:0010182: sugar mediated signaling pathway | 4.84E-03 |
| 58 | GO:0010183: pollen tube guidance | 5.34E-03 |
| 59 | GO:0009749: response to glucose | 5.34E-03 |
| 60 | GO:0010193: response to ozone | 5.60E-03 |
| 61 | GO:0071281: cellular response to iron ion | 6.12E-03 |
| 62 | GO:0051607: defense response to virus | 6.94E-03 |
| 63 | GO:0030244: cellulose biosynthetic process | 8.68E-03 |
| 64 | GO:0009832: plant-type cell wall biogenesis | 8.99E-03 |
| 65 | GO:0008152: metabolic process | 1.03E-02 |
| 66 | GO:0006839: mitochondrial transport | 1.12E-02 |
| 67 | GO:0006631: fatty acid metabolic process | 1.16E-02 |
| 68 | GO:0009846: pollen germination | 1.44E-02 |
| 69 | GO:0042538: hyperosmotic salinity response | 1.44E-02 |
| 70 | GO:0009735: response to cytokinin | 1.51E-02 |
| 71 | GO:0009809: lignin biosynthetic process | 1.51E-02 |
| 72 | GO:0006364: rRNA processing | 1.51E-02 |
| 73 | GO:0009737: response to abscisic acid | 1.78E-02 |
| 74 | GO:0016569: covalent chromatin modification | 1.86E-02 |
| 75 | GO:0009553: embryo sac development | 1.90E-02 |
| 76 | GO:0009790: embryo development | 2.55E-02 |
| 77 | GO:0007166: cell surface receptor signaling pathway | 3.15E-02 |
| 78 | GO:0006470: protein dephosphorylation | 3.15E-02 |
| 79 | GO:0009414: response to water deprivation | 3.28E-02 |
| 80 | GO:0042254: ribosome biogenesis | 3.96E-02 |
| 81 | GO:0009860: pollen tube growth | 4.12E-02 |
| 82 | GO:0048366: leaf development | 4.39E-02 |
| 83 | GO:0009409: response to cold | 4.53E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004764: shikimate 3-dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 3 | GO:0003855: 3-dehydroquinate dehydratase activity | 0.00E+00 |
| 4 | GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 5.34E-05 |
| 5 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 5.34E-05 |
| 6 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 5.34E-05 |
| 7 | GO:0047150: betaine-homocysteine S-methyltransferase activity | 5.34E-05 |
| 8 | GO:0008746: NAD(P)+ transhydrogenase activity | 5.34E-05 |
| 9 | GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H | 5.34E-05 |
| 10 | GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity | 1.30E-04 |
| 11 | GO:0043021: ribonucleoprotein complex binding | 1.30E-04 |
| 12 | GO:0004817: cysteine-tRNA ligase activity | 1.30E-04 |
| 13 | GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity | 1.30E-04 |
| 14 | GO:0052691: UDP-arabinopyranose mutase activity | 1.30E-04 |
| 15 | GO:0042937: tripeptide transporter activity | 1.30E-04 |
| 16 | GO:0004478: methionine adenosyltransferase activity | 2.22E-04 |
| 17 | GO:0019829: cation-transporting ATPase activity | 2.22E-04 |
| 18 | GO:0008964: phosphoenolpyruvate carboxylase activity | 2.22E-04 |
| 19 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 3.25E-04 |
| 20 | GO:0042936: dipeptide transporter activity | 4.35E-04 |
| 21 | GO:0016866: intramolecular transferase activity | 4.35E-04 |
| 22 | GO:0004930: G-protein coupled receptor activity | 4.35E-04 |
| 23 | GO:0046527: glucosyltransferase activity | 4.35E-04 |
| 24 | GO:0000287: magnesium ion binding | 6.28E-04 |
| 25 | GO:0008420: CTD phosphatase activity | 6.76E-04 |
| 26 | GO:0016615: malate dehydrogenase activity | 6.76E-04 |
| 27 | GO:0102391: decanoate--CoA ligase activity | 8.05E-04 |
| 28 | GO:0030060: L-malate dehydrogenase activity | 8.05E-04 |
| 29 | GO:0102425: myricetin 3-O-glucosyltransferase activity | 9.40E-04 |
| 30 | GO:0102360: daphnetin 3-O-glucosyltransferase activity | 9.40E-04 |
| 31 | GO:0004467: long-chain fatty acid-CoA ligase activity | 9.40E-04 |
| 32 | GO:0004033: aldo-keto reductase (NADP) activity | 1.08E-03 |
| 33 | GO:0047893: flavonol 3-O-glucosyltransferase activity | 1.08E-03 |
| 34 | GO:0008135: translation factor activity, RNA binding | 1.23E-03 |
| 35 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 1.38E-03 |
| 36 | GO:0004743: pyruvate kinase activity | 1.54E-03 |
| 37 | GO:0030955: potassium ion binding | 1.54E-03 |
| 38 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.77E-03 |
| 39 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.77E-03 |
| 40 | GO:0015198: oligopeptide transporter activity | 2.06E-03 |
| 41 | GO:0015114: phosphate ion transmembrane transporter activity | 2.25E-03 |
| 42 | GO:0005388: calcium-transporting ATPase activity | 2.25E-03 |
| 43 | GO:0000166: nucleotide binding | 2.78E-03 |
| 44 | GO:0051536: iron-sulfur cluster binding | 3.03E-03 |
| 45 | GO:0004407: histone deacetylase activity | 3.03E-03 |
| 46 | GO:0035251: UDP-glucosyltransferase activity | 3.46E-03 |
| 47 | GO:0008194: UDP-glycosyltransferase activity | 3.69E-03 |
| 48 | GO:0003743: translation initiation factor activity | 3.85E-03 |
| 49 | GO:0016760: cellulose synthase (UDP-forming) activity | 3.90E-03 |
| 50 | GO:0047134: protein-disulfide reductase activity | 4.36E-03 |
| 51 | GO:0004791: thioredoxin-disulfide reductase activity | 5.09E-03 |
| 52 | GO:0010181: FMN binding | 5.09E-03 |
| 53 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 8.38E-03 |
| 54 | GO:0005096: GTPase activator activity | 8.99E-03 |
| 55 | GO:0030145: manganese ion binding | 9.61E-03 |
| 56 | GO:0003746: translation elongation factor activity | 1.02E-02 |
| 57 | GO:0050661: NADP binding | 1.12E-02 |
| 58 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.12E-02 |
| 59 | GO:0051287: NAD binding | 1.40E-02 |
| 60 | GO:0016887: ATPase activity | 1.45E-02 |
| 61 | GO:0022857: transmembrane transporter activity | 1.86E-02 |
| 62 | GO:0046872: metal ion binding | 1.96E-02 |
| 63 | GO:0005515: protein binding | 1.99E-02 |
| 64 | GO:0016758: transferase activity, transferring hexosyl groups | 2.24E-02 |
| 65 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.73E-02 |
| 66 | GO:0008168: methyltransferase activity | 3.81E-02 |
| 67 | GO:0016788: hydrolase activity, acting on ester bonds | 3.96E-02 |
| 68 | GO:0005524: ATP binding | 4.78E-02 |
| 69 | GO:0052689: carboxylic ester hydrolase activity | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036396: MIS complex | 0.00E+00 |
| 2 | GO:0005829: cytosol | 3.46E-07 |
| 3 | GO:0005730: nucleolus | 1.24E-05 |
| 4 | GO:0000138: Golgi trans cisterna | 5.34E-05 |
| 5 | GO:0070545: PeBoW complex | 1.30E-04 |
| 6 | GO:0030130: clathrin coat of trans-Golgi network vesicle | 2.22E-04 |
| 7 | GO:0030132: clathrin coat of coated pit | 2.22E-04 |
| 8 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 7.20E-04 |
| 9 | GO:0030687: preribosome, large subunit precursor | 9.40E-04 |
| 10 | GO:0005740: mitochondrial envelope | 1.71E-03 |
| 11 | GO:0005834: heterotrimeric G-protein complex | 1.71E-03 |
| 12 | GO:0009536: plastid | 1.77E-03 |
| 13 | GO:0005654: nucleoplasm | 2.35E-03 |
| 14 | GO:0005795: Golgi stack | 2.63E-03 |
| 15 | GO:0005618: cell wall | 2.69E-03 |
| 16 | GO:0005886: plasma membrane | 3.16E-03 |
| 17 | GO:0009532: plastid stroma | 3.46E-03 |
| 18 | GO:0005741: mitochondrial outer membrane | 3.46E-03 |
| 19 | GO:0000775: chromosome, centromeric region | 3.68E-03 |
| 20 | GO:0005694: chromosome | 5.86E-03 |
| 21 | GO:0009570: chloroplast stroma | 6.48E-03 |
| 22 | GO:0010319: stromule | 6.66E-03 |
| 23 | GO:0009506: plasmodesma | 7.11E-03 |
| 24 | GO:0030529: intracellular ribonucleoprotein complex | 7.22E-03 |
| 25 | GO:0005774: vacuolar membrane | 8.56E-03 |
| 26 | GO:0015934: large ribosomal subunit | 9.61E-03 |
| 27 | GO:0043231: intracellular membrane-bounded organelle | 1.03E-02 |
| 28 | GO:0005737: cytoplasm | 1.64E-02 |
| 29 | GO:0010008: endosome membrane | 1.74E-02 |
| 30 | GO:0016607: nuclear speck | 1.74E-02 |
| 31 | GO:0009543: chloroplast thylakoid lumen | 2.28E-02 |
| 32 | GO:0031225: anchored component of membrane | 2.59E-02 |
| 33 | GO:0048046: apoplast | 3.46E-02 |
| 34 | GO:0046658: anchored component of plasma membrane | 3.50E-02 |
| 35 | GO:0022625: cytosolic large ribosomal subunit | 4.73E-02 |