co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G24050

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901799: negative regulation of proteasomal protein catabolic process	0.00E+00
2	GO:0006511: ubiquitin-dependent protein catabolic process	5.72E-16
3	GO:0051603: proteolysis involved in cellular protein catabolic process	1.02E-05
4	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	7.04E-05
5	GO:2001006: regulation of cellulose biosynthetic process	7.23E-05
6	GO:0071668: plant-type cell wall assembly	1.74E-04
7	GO:0006412: translation	1.80E-04
8	GO:0006487: protein N-linked glycosylation	2.07E-04
9	GO:0006760: folic acid-containing compound metabolic process	2.93E-04
10	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	4.23E-04
11	GO:0043248: proteasome assembly	8.73E-04
12	GO:0046686: response to cadmium ion	1.07E-03
13	GO:0006506: GPI anchor biosynthetic process	1.40E-03
14	GO:0000028: ribosomal small subunit assembly	1.40E-03
15	GO:0000209: protein polyubiquitination	1.57E-03
16	GO:0009808: lignin metabolic process	1.59E-03
17	GO:0022900: electron transport chain	1.59E-03
18	GO:0009245: lipid A biosynthetic process	1.80E-03
19	GO:0048589: developmental growth	1.80E-03
20	GO:0043069: negative regulation of programmed cell death	2.23E-03
21	GO:0010015: root morphogenesis	2.46E-03
22	GO:0071365: cellular response to auxin stimulus	2.70E-03
23	GO:0016925: protein sumoylation	2.70E-03
24	GO:0002237: response to molecule of bacterial origin	3.19E-03
25	GO:0000398: mRNA splicing, via spliceosome	3.29E-03
26	GO:0007030: Golgi organization	3.44E-03
27	GO:0010039: response to iron ion	3.44E-03
28	GO:0006406: mRNA export from nucleus	3.98E-03
29	GO:0061077: chaperone-mediated protein folding	4.54E-03
30	GO:0016226: iron-sulfur cluster assembly	4.83E-03
31	GO:0042147: retrograde transport, endosome to Golgi	5.74E-03
32	GO:0015991: ATP hydrolysis coupled proton transport	6.05E-03
33	GO:0000413: protein peptidyl-prolyl isomerization	6.05E-03
34	GO:0015986: ATP synthesis coupled proton transport	6.70E-03
35	GO:0006914: autophagy	8.43E-03
36	GO:0010286: heat acclimation	8.79E-03
37	GO:0009817: defense response to fungus, incompatible interaction	1.15E-02
38	GO:0009832: plant-type cell wall biogenesis	1.19E-02
39	GO:0010043: response to zinc ion	1.27E-02
40	GO:0009910: negative regulation of flower development	1.27E-02
41	GO:0009631: cold acclimation	1.27E-02
42	GO:0000724: double-strand break repair via homologous recombination	1.32E-02
43	GO:0009853: photorespiration	1.36E-02
44	GO:0009965: leaf morphogenesis	1.77E-02
45	GO:0006486: protein glycosylation	2.01E-02
46	GO:0006457: protein folding	3.21E-02
47	GO:0006633: fatty acid biosynthetic process	3.56E-02
48	GO:0006414: translational elongation	3.69E-02
49	GO:0008380: RNA splicing	4.32E-02
50	GO:0042742: defense response to bacterium	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0004298: threonine-type endopeptidase activity	2.03E-24
2	GO:0008233: peptidase activity	5.80E-13
3	GO:0003735: structural constituent of ribosome	8.38E-07
4	GO:0004576: oligosaccharyl transferase activity	5.16E-06
5	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	8.65E-06
6	GO:0005047: signal recognition particle binding	2.93E-04
7	GO:0008137: NADH dehydrogenase (ubiquinone) activity	5.15E-04
8	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	5.65E-04
9	GO:0005496: steroid binding	7.14E-04
10	GO:0031386: protein tag	7.14E-04
11	GO:0031177: phosphopantetheine binding	8.73E-04
12	GO:0000035: acyl binding	1.04E-03
13	GO:0008143: poly(A) binding	1.21E-03
14	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.40E-03
15	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.76E-03
16	GO:0031625: ubiquitin protein ligase binding	2.24E-03
17	GO:0046961: proton-transporting ATPase activity, rotational mechanism	2.46E-03
18	GO:0004175: endopeptidase activity	3.19E-03
19	GO:0019843: rRNA binding	3.57E-03
20	GO:0005528: FK506 binding	3.98E-03
21	GO:0008080: N-acetyltransferase activity	6.38E-03
22	GO:0016597: amino acid binding	9.16E-03
23	GO:0061630: ubiquitin protein ligase activity	9.91E-03
24	GO:0050897: cobalt ion binding	1.27E-02
25	GO:0003746: translation elongation factor activity	1.36E-02
26	GO:0051539: 4 iron, 4 sulfur cluster binding	1.49E-02
27	GO:0043621: protein self-association	1.72E-02
28	GO:0022857: transmembrane transporter activity	2.47E-02
29	GO:0008565: protein transporter activity	3.44E-02
30	GO:0008017: microtubule binding	3.94E-02

Rank	GO Term	Adjusted P value
1	GO:0097361: CIA complex	0.00E+00
2	GO:0019774: proteasome core complex, beta-subunit complex	0.00E+00
3	GO:0000502: proteasome complex	5.18E-27
4	GO:0005839: proteasome core complex	2.03E-24
5	GO:0019773: proteasome core complex, alpha-subunit complex	4.49E-12
6	GO:0005829: cytosol	1.82E-11
7	GO:0022626: cytosolic ribosome	1.66E-09
8	GO:0008250: oligosaccharyltransferase complex	8.65E-06
9	GO:0005840: ribosome	1.02E-05
10	GO:0005732: small nucleolar ribonucleoprotein complex	2.34E-05
11	GO:0005774: vacuolar membrane	5.44E-05
12	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	1.74E-04
13	GO:0022625: cytosolic large ribosomal subunit	2.00E-04
14	GO:0005747: mitochondrial respiratory chain complex I	2.49E-04
15	GO:0005853: eukaryotic translation elongation factor 1 complex	2.93E-04
16	GO:0005737: cytoplasm	2.95E-04
17	GO:1990726: Lsm1-7-Pat1 complex	4.23E-04
18	GO:0022627: cytosolic small ribosomal subunit	8.71E-04
19	GO:0030904: retromer complex	8.73E-04
20	GO:0005730: nucleolus	1.24E-03
21	GO:0005688: U6 snRNP	1.40E-03
22	GO:0000421: autophagosome membrane	1.40E-03
23	GO:0046540: U4/U6 x U5 tri-snRNP complex	1.59E-03
24	GO:0005763: mitochondrial small ribosomal subunit	1.80E-03
25	GO:0071011: precatalytic spliceosome	2.01E-03
26	GO:0008541: proteasome regulatory particle, lid subcomplex	2.46E-03
27	GO:0071013: catalytic step 2 spliceosome	2.46E-03
28	GO:0005773: vacuole	2.66E-03
29	GO:0005753: mitochondrial proton-transporting ATP synthase complex	3.44E-03
30	GO:0070469: respiratory chain	4.26E-03
31	GO:0045271: respiratory chain complex I	4.26E-03
32	GO:0015935: small ribosomal subunit	4.54E-03
33	GO:0031410: cytoplasmic vesicle	4.83E-03
34	GO:0000932: P-body	9.54E-03
35	GO:0005788: endoplasmic reticulum lumen	9.92E-03
36	GO:0005794: Golgi apparatus	1.05E-02
37	GO:0000325: plant-type vacuole	1.27E-02
38	GO:0005819: spindle	1.45E-02
39	GO:0031902: late endosome membrane	1.54E-02
40	GO:0031966: mitochondrial membrane	1.91E-02
41	GO:0005681: spliceosomal complex	2.26E-02
42	GO:0016607: nuclear speck	2.31E-02
43	GO:0005834: heterotrimeric G-protein complex	2.37E-02
44	GO:0012505: endomembrane system	2.53E-02
45	GO:0009543: chloroplast thylakoid lumen	3.03E-02
46	GO:0005623: cell	3.09E-02
47	GO:0009524: phragmoplast	3.15E-02
48	GO:0005759: mitochondrial matrix	3.56E-02
49	GO:0009705: plant-type vacuole membrane	3.81E-02
50	GO:0005783: endoplasmic reticulum	4.42E-02