GO Enrichment Analysis of Co-expressed Genes with
AT1G23410
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 2 | GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process | 0.00E+00 |
| 3 | GO:1903857: negative regulation of cytokinin dehydrogenase activity | 0.00E+00 |
| 4 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 5 | GO:0046487: glyoxylate metabolic process | 0.00E+00 |
| 6 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 7 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 8 | GO:0070918: production of small RNA involved in gene silencing by RNA | 0.00E+00 |
| 9 | GO:1990569: UDP-N-acetylglucosamine transmembrane transport | 0.00E+00 |
| 10 | GO:0015789: UDP-N-acetylgalactosamine transport | 0.00E+00 |
| 11 | GO:0006412: translation | 2.84E-183 |
| 12 | GO:0042254: ribosome biogenesis | 4.70E-68 |
| 13 | GO:0000027: ribosomal large subunit assembly | 7.46E-15 |
| 14 | GO:0006626: protein targeting to mitochondrion | 8.40E-10 |
| 15 | GO:0000028: ribosomal small subunit assembly | 2.06E-07 |
| 16 | GO:0009735: response to cytokinin | 4.85E-06 |
| 17 | GO:0009955: adaxial/abaxial pattern specification | 6.43E-06 |
| 18 | GO:0009967: positive regulation of signal transduction | 6.85E-06 |
| 19 | GO:1902626: assembly of large subunit precursor of preribosome | 2.39E-05 |
| 20 | GO:0002181: cytoplasmic translation | 2.39E-05 |
| 21 | GO:0006820: anion transport | 8.11E-05 |
| 22 | GO:0006364: rRNA processing | 9.57E-05 |
| 23 | GO:0031167: rRNA methylation | 1.43E-04 |
| 24 | GO:0030150: protein import into mitochondrial matrix | 1.92E-04 |
| 25 | GO:0017198: N-terminal peptidyl-serine acetylation | 3.92E-04 |
| 26 | GO:0030490: maturation of SSU-rRNA | 3.92E-04 |
| 27 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.92E-04 |
| 28 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.92E-04 |
| 29 | GO:0018002: N-terminal peptidyl-glutamic acid acetylation | 3.92E-04 |
| 30 | GO:0032365: intracellular lipid transport | 3.92E-04 |
| 31 | GO:0006407: rRNA export from nucleus | 3.92E-04 |
| 32 | GO:0031120: snRNA pseudouridine synthesis | 3.92E-04 |
| 33 | GO:0006475: internal protein amino acid acetylation | 3.92E-04 |
| 34 | GO:0031118: rRNA pseudouridine synthesis | 3.92E-04 |
| 35 | GO:0015801: aromatic amino acid transport | 3.92E-04 |
| 36 | GO:0001510: RNA methylation | 5.48E-04 |
| 37 | GO:0098656: anion transmembrane transport | 6.57E-04 |
| 38 | GO:0000387: spliceosomal snRNP assembly | 7.75E-04 |
| 39 | GO:0048569: post-embryonic animal organ development | 8.49E-04 |
| 40 | GO:0015786: UDP-glucose transport | 8.49E-04 |
| 41 | GO:0015783: GDP-fucose transport | 1.38E-03 |
| 42 | GO:0010476: gibberellin mediated signaling pathway | 1.38E-03 |
| 43 | GO:0042256: mature ribosome assembly | 1.38E-03 |
| 44 | GO:0009150: purine ribonucleotide metabolic process | 1.38E-03 |
| 45 | GO:0006414: translational elongation | 1.96E-03 |
| 46 | GO:0007004: telomere maintenance via telomerase | 1.99E-03 |
| 47 | GO:0070301: cellular response to hydrogen peroxide | 1.99E-03 |
| 48 | GO:0006241: CTP biosynthetic process | 1.99E-03 |
| 49 | GO:0072334: UDP-galactose transmembrane transport | 1.99E-03 |
| 50 | GO:0006165: nucleoside diphosphate phosphorylation | 1.99E-03 |
| 51 | GO:0006228: UTP biosynthetic process | 1.99E-03 |
| 52 | GO:0006164: purine nucleotide biosynthetic process | 1.99E-03 |
| 53 | GO:0042274: ribosomal small subunit biogenesis | 2.67E-03 |
| 54 | GO:0006183: GTP biosynthetic process | 2.67E-03 |
| 55 | GO:0007005: mitochondrion organization | 2.78E-03 |
| 56 | GO:0071215: cellular response to abscisic acid stimulus | 3.04E-03 |
| 57 | GO:1902183: regulation of shoot apical meristem development | 3.42E-03 |
| 58 | GO:0009793: embryo development ending in seed dormancy | 3.53E-03 |
| 59 | GO:0008033: tRNA processing | 3.87E-03 |
| 60 | GO:0000470: maturation of LSU-rRNA | 4.23E-03 |
| 61 | GO:0045040: protein import into mitochondrial outer membrane | 4.23E-03 |
| 62 | GO:0009648: photoperiodism | 5.09E-03 |
| 63 | GO:0006458: 'de novo' protein folding | 5.09E-03 |
| 64 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 6.02E-03 |
| 65 | GO:0001522: pseudouridine synthesis | 7.00E-03 |
| 66 | GO:0000398: mRNA splicing, via spliceosome | 7.34E-03 |
| 67 | GO:0009409: response to cold | 7.38E-03 |
| 68 | GO:0044030: regulation of DNA methylation | 8.03E-03 |
| 69 | GO:0001558: regulation of cell growth | 8.03E-03 |
| 70 | GO:0006526: arginine biosynthetic process | 8.03E-03 |
| 71 | GO:0009845: seed germination | 9.01E-03 |
| 72 | GO:0006189: 'de novo' IMP biosynthetic process | 9.12E-03 |
| 73 | GO:0009060: aerobic respiration | 9.12E-03 |
| 74 | GO:0015780: nucleotide-sugar transport | 9.12E-03 |
| 75 | GO:0009245: lipid A biosynthetic process | 9.12E-03 |
| 76 | GO:0010015: root morphogenesis | 1.27E-02 |
| 77 | GO:0006913: nucleocytoplasmic transport | 1.27E-02 |
| 78 | GO:0006790: sulfur compound metabolic process | 1.40E-02 |
| 79 | GO:0010102: lateral root morphogenesis | 1.53E-02 |
| 80 | GO:0008283: cell proliferation | 1.60E-02 |
| 81 | GO:0048467: gynoecium development | 1.66E-02 |
| 82 | GO:0006446: regulation of translational initiation | 1.66E-02 |
| 83 | GO:0009644: response to high light intensity | 1.73E-02 |
| 84 | GO:0015031: protein transport | 1.79E-02 |
| 85 | GO:0009965: leaf morphogenesis | 1.80E-02 |
| 86 | GO:0009651: response to salt stress | 2.14E-02 |
| 87 | GO:0051302: regulation of cell division | 2.25E-02 |
| 88 | GO:0015992: proton transport | 2.41E-02 |
| 89 | GO:0061077: chaperone-mediated protein folding | 2.41E-02 |
| 90 | GO:0006306: DNA methylation | 2.41E-02 |
| 91 | GO:0003333: amino acid transmembrane transport | 2.41E-02 |
| 92 | GO:0040007: growth | 2.73E-02 |
| 93 | GO:0010584: pollen exine formation | 2.90E-02 |
| 94 | GO:0000413: protein peptidyl-prolyl isomerization | 3.25E-02 |
| 95 | GO:0010197: polar nucleus fusion | 3.42E-02 |
| 96 | GO:0009749: response to glucose | 3.79E-02 |
| 97 | GO:0006635: fatty acid beta-oxidation | 3.98E-02 |
| 98 | GO:0000302: response to reactive oxygen species | 3.98E-02 |
| 99 | GO:0006413: translational initiation | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 2 | GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 4 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 5 | GO:0004055: argininosuccinate synthase activity | 0.00E+00 |
| 6 | GO:0003735: structural constituent of ribosome | 5.87E-222 |
| 7 | GO:0003729: mRNA binding | 1.25E-38 |
| 8 | GO:0019843: rRNA binding | 5.08E-17 |
| 9 | GO:0005078: MAP-kinase scaffold activity | 6.85E-06 |
| 10 | GO:0003723: RNA binding | 9.85E-06 |
| 11 | GO:0030515: snoRNA binding | 1.02E-05 |
| 12 | GO:0015288: porin activity | 1.53E-05 |
| 13 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.54E-05 |
| 14 | GO:0008308: voltage-gated anion channel activity | 2.19E-05 |
| 15 | GO:0008649: rRNA methyltransferase activity | 2.39E-05 |
| 16 | GO:0008097: 5S rRNA binding | 5.22E-05 |
| 17 | GO:1990189: peptide-serine-N-acetyltransferase activity | 3.92E-04 |
| 18 | GO:1990190: peptide-glutamate-N-acetyltransferase activity | 3.92E-04 |
| 19 | GO:0048037: cofactor binding | 3.92E-04 |
| 20 | GO:0005080: protein kinase C binding | 3.92E-04 |
| 21 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 8.49E-04 |
| 22 | GO:0015173: aromatic amino acid transmembrane transporter activity | 8.49E-04 |
| 23 | GO:0070034: telomerase RNA binding | 8.49E-04 |
| 24 | GO:0032934: sterol binding | 8.49E-04 |
| 25 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 8.49E-04 |
| 26 | GO:0044183: protein binding involved in protein folding | 1.04E-03 |
| 27 | GO:0015266: protein channel activity | 1.34E-03 |
| 28 | GO:0005457: GDP-fucose transmembrane transporter activity | 1.38E-03 |
| 29 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 1.38E-03 |
| 30 | GO:0032947: protein complex scaffold | 1.38E-03 |
| 31 | GO:0003746: translation elongation factor activity | 1.93E-03 |
| 32 | GO:0047627: adenylylsulfatase activity | 1.99E-03 |
| 33 | GO:0005460: UDP-glucose transmembrane transporter activity | 1.99E-03 |
| 34 | GO:0004550: nucleoside diphosphate kinase activity | 1.99E-03 |
| 35 | GO:0005459: UDP-galactose transmembrane transporter activity | 3.42E-03 |
| 36 | GO:0005275: amine transmembrane transporter activity | 3.42E-03 |
| 37 | GO:0031177: phosphopantetheine binding | 4.23E-03 |
| 38 | GO:0000035: acyl binding | 5.09E-03 |
| 39 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 6.02E-03 |
| 40 | GO:0008235: metalloexopeptidase activity | 6.02E-03 |
| 41 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 6.02E-03 |
| 42 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 7.00E-03 |
| 43 | GO:0043022: ribosome binding | 7.00E-03 |
| 44 | GO:0001055: RNA polymerase II activity | 1.03E-02 |
| 45 | GO:0001054: RNA polymerase I activity | 1.27E-02 |
| 46 | GO:0001056: RNA polymerase III activity | 1.40E-02 |
| 47 | GO:0051087: chaperone binding | 2.25E-02 |
| 48 | GO:0004298: threonine-type endopeptidase activity | 2.41E-02 |
| 49 | GO:0008514: organic anion transmembrane transporter activity | 2.90E-02 |
| 50 | GO:0000166: nucleotide binding | 3.05E-02 |
| 51 | GO:0051082: unfolded protein binding | 3.08E-02 |
| 52 | GO:0008080: N-acetyltransferase activity | 3.42E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 3 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 4 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 5 | GO:0005840: ribosome | 2.66E-153 |
| 6 | GO:0022625: cytosolic large ribosomal subunit | 7.21E-139 |
| 7 | GO:0022626: cytosolic ribosome | 2.13E-137 |
| 8 | GO:0022627: cytosolic small ribosomal subunit | 4.42E-92 |
| 9 | GO:0005737: cytoplasm | 2.17E-48 |
| 10 | GO:0005730: nucleolus | 2.73E-47 |
| 11 | GO:0005829: cytosol | 2.51E-36 |
| 12 | GO:0009506: plasmodesma | 2.64E-26 |
| 13 | GO:0015934: large ribosomal subunit | 1.61E-19 |
| 14 | GO:0016020: membrane | 1.79E-17 |
| 15 | GO:0005774: vacuolar membrane | 3.46E-17 |
| 16 | GO:0015935: small ribosomal subunit | 2.22E-14 |
| 17 | GO:0005773: vacuole | 2.92E-12 |
| 18 | GO:0005618: cell wall | 2.23E-09 |
| 19 | GO:0015030: Cajal body | 8.42E-07 |
| 20 | GO:0009507: chloroplast | 1.05E-06 |
| 21 | GO:0046930: pore complex | 2.19E-05 |
| 22 | GO:0005742: mitochondrial outer membrane translocase complex | 2.19E-05 |
| 23 | GO:0019013: viral nucleocapsid | 9.89E-05 |
| 24 | GO:0005758: mitochondrial intermembrane space | 1.92E-04 |
| 25 | GO:0031428: box C/D snoRNP complex | 2.05E-04 |
| 26 | GO:0005741: mitochondrial outer membrane | 2.53E-04 |
| 27 | GO:0005886: plasma membrane | 2.60E-04 |
| 28 | GO:0030686: 90S preribosome | 3.92E-04 |
| 29 | GO:0031415: NatA complex | 8.49E-04 |
| 30 | GO:0032040: small-subunit processome | 1.19E-03 |
| 31 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.32E-03 |
| 32 | GO:0034719: SMN-Sm protein complex | 1.38E-03 |
| 33 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.38E-03 |
| 34 | GO:0000419: DNA-directed RNA polymerase V complex | 1.89E-03 |
| 35 | GO:0031429: box H/ACA snoRNP complex | 1.99E-03 |
| 36 | GO:0005682: U5 snRNP | 2.67E-03 |
| 37 | GO:0005743: mitochondrial inner membrane | 3.08E-03 |
| 38 | GO:0005687: U4 snRNP | 3.42E-03 |
| 39 | GO:0097526: spliceosomal tri-snRNP complex | 3.42E-03 |
| 40 | GO:0005681: spliceosomal complex | 4.83E-03 |
| 41 | GO:0005689: U12-type spliceosomal complex | 5.09E-03 |
| 42 | GO:0016272: prefoldin complex | 5.09E-03 |
| 43 | GO:0071004: U2-type prespliceosome | 7.00E-03 |
| 44 | GO:0030529: intracellular ribonucleoprotein complex | 7.46E-03 |
| 45 | GO:0005622: intracellular | 8.77E-03 |
| 46 | GO:0005736: DNA-directed RNA polymerase I complex | 9.12E-03 |
| 47 | GO:0005685: U1 snRNP | 9.12E-03 |
| 48 | GO:0005666: DNA-directed RNA polymerase III complex | 1.03E-02 |
| 49 | GO:0071011: precatalytic spliceosome | 1.03E-02 |
| 50 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.14E-02 |
| 51 | GO:0005740: mitochondrial envelope | 1.14E-02 |
| 52 | GO:0005686: U2 snRNP | 1.14E-02 |
| 53 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.27E-02 |
| 54 | GO:0071013: catalytic step 2 spliceosome | 1.27E-02 |
| 55 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.40E-02 |
| 56 | GO:0031307: integral component of mitochondrial outer membrane | 1.40E-02 |
| 57 | GO:0005750: mitochondrial respiratory chain complex III | 1.66E-02 |
| 58 | GO:0009536: plastid | 1.67E-02 |
| 59 | GO:0070469: respiratory chain | 2.25E-02 |
| 60 | GO:0005839: proteasome core complex | 2.41E-02 |
| 61 | GO:0005834: heterotrimeric G-protein complex | 2.73E-02 |
| 62 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 2.90E-02 |
| 63 | GO:0005777: peroxisome | 3.73E-02 |
| 64 | GO:0005654: nucleoplasm | 3.75E-02 |
| 65 | GO:0016592: mediator complex | 4.17E-02 |