co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G23210

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:0015717: triose phosphate transport	0.00E+00
3	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
4	GO:0002184: cytoplasmic translational termination	0.00E+00
5	GO:0030155: regulation of cell adhesion	0.00E+00
6	GO:0007172: signal complex assembly	0.00E+00
7	GO:0015979: photosynthesis	2.83E-06
8	GO:0032544: plastid translation	2.85E-06
9	GO:0009773: photosynthetic electron transport in photosystem I	9.50E-06
10	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.21E-05
11	GO:0000023: maltose metabolic process	1.71E-04
12	GO:0000025: maltose catabolic process	1.71E-04
13	GO:0005980: glycogen catabolic process	1.71E-04
14	GO:0015995: chlorophyll biosynthetic process	2.74E-04
15	GO:0005983: starch catabolic process	3.73E-04
16	GO:0005976: polysaccharide metabolic process	3.87E-04
17	GO:0031648: protein destabilization	3.87E-04
18	GO:0030388: fructose 1,6-bisphosphate metabolic process	3.87E-04
19	GO:0006412: translation	4.12E-04
20	GO:0006094: gluconeogenesis	4.24E-04
21	GO:0006810: transport	6.20E-04
22	GO:0080055: low-affinity nitrate transport	6.32E-04
23	GO:0035436: triose phosphate transmembrane transport	6.32E-04
24	GO:0048281: inflorescence morphogenesis	6.32E-04
25	GO:0006000: fructose metabolic process	6.32E-04
26	GO:0009405: pathogenesis	6.32E-04
27	GO:0061077: chaperone-mediated protein folding	7.97E-04
28	GO:0042254: ribosome biogenesis	8.59E-04
29	GO:0010731: protein glutathionylation	9.04E-04
30	GO:0010148: transpiration	9.04E-04
31	GO:0009735: response to cytokinin	9.79E-04
32	GO:0010021: amylopectin biosynthetic process	1.20E-03
33	GO:0010037: response to carbon dioxide	1.20E-03
34	GO:0006808: regulation of nitrogen utilization	1.20E-03
35	GO:0015976: carbon utilization	1.20E-03
36	GO:0010023: proanthocyanidin biosynthetic process	1.20E-03
37	GO:0009765: photosynthesis, light harvesting	1.20E-03
38	GO:0010600: regulation of auxin biosynthetic process	1.20E-03
39	GO:0015713: phosphoglycerate transport	1.20E-03
40	GO:2000122: negative regulation of stomatal complex development	1.20E-03
41	GO:0031122: cytoplasmic microtubule organization	1.20E-03
42	GO:0048497: maintenance of floral organ identity	1.52E-03
43	GO:0010190: cytochrome b6f complex assembly	1.87E-03
44	GO:0003006: developmental process involved in reproduction	1.87E-03
45	GO:0009643: photosynthetic acclimation	1.87E-03
46	GO:0042549: photosystem II stabilization	1.87E-03
47	GO:0000470: maturation of LSU-rRNA	1.87E-03
48	GO:0009913: epidermal cell differentiation	1.87E-03
49	GO:0009409: response to cold	1.89E-03
50	GO:0006458: 'de novo' protein folding	2.24E-03
51	GO:0009955: adaxial/abaxial pattern specification	2.24E-03
52	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.24E-03
53	GO:0042026: protein refolding	2.24E-03
54	GO:1901259: chloroplast rRNA processing	2.24E-03
55	GO:0009645: response to low light intensity stimulus	2.64E-03
56	GO:0010103: stomatal complex morphogenesis	2.64E-03
57	GO:0010161: red light signaling pathway	2.64E-03
58	GO:0070370: cellular heat acclimation	2.64E-03
59	GO:0009817: defense response to fungus, incompatible interaction	2.94E-03
60	GO:0009704: de-etiolation	3.06E-03
61	GO:0010928: regulation of auxin mediated signaling pathway	3.06E-03
62	GO:0005978: glycogen biosynthetic process	3.06E-03
63	GO:0006353: DNA-templated transcription, termination	3.06E-03
64	GO:0006002: fructose 6-phosphate metabolic process	3.50E-03
65	GO:0001558: regulation of cell growth	3.50E-03
66	GO:0042742: defense response to bacterium	3.94E-03
67	GO:0006783: heme biosynthetic process	3.95E-03
68	GO:0000902: cell morphogenesis	3.95E-03
69	GO:0048507: meristem development	3.95E-03
70	GO:0051865: protein autoubiquitination	3.95E-03
71	GO:0005982: starch metabolic process	4.44E-03
72	GO:0010215: cellulose microfibril organization	4.93E-03
73	GO:0031627: telomeric loop formation	4.93E-03
74	GO:0006782: protoporphyrinogen IX biosynthetic process	4.93E-03
75	GO:0009644: response to high light intensity	5.17E-03
76	GO:0055114: oxidation-reduction process	5.24E-03
77	GO:0009750: response to fructose	5.45E-03
78	GO:0010015: root morphogenesis	5.45E-03
79	GO:0006415: translational termination	5.45E-03
80	GO:0010582: floral meristem determinacy	5.98E-03
81	GO:0018107: peptidyl-threonine phosphorylation	6.54E-03
82	GO:0009718: anthocyanin-containing compound biosynthetic process	6.54E-03
83	GO:0005986: sucrose biosynthetic process	6.54E-03
84	GO:0010102: lateral root morphogenesis	6.54E-03
85	GO:0009266: response to temperature stimulus	7.11E-03
86	GO:0009934: regulation of meristem structural organization	7.11E-03
87	GO:0006302: double-strand break repair	7.11E-03
88	GO:0048467: gynoecium development	7.11E-03
89	GO:0010020: chloroplast fission	7.11E-03
90	GO:0006289: nucleotide-excision repair	8.92E-03
91	GO:0009944: polarity specification of adaxial/abaxial axis	8.92E-03
92	GO:0009768: photosynthesis, light harvesting in photosystem I	9.56E-03
93	GO:0051302: regulation of cell division	9.56E-03
94	GO:0007017: microtubule-based process	9.56E-03
95	GO:0019915: lipid storage	1.02E-02
96	GO:0051321: meiotic cell cycle	1.02E-02
97	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.09E-02
98	GO:0010017: red or far-red light signaling pathway	1.09E-02
99	GO:0001944: vasculature development	1.16E-02
100	GO:0009686: gibberellin biosynthetic process	1.16E-02
101	GO:0048825: cotyledon development	1.60E-02
102	GO:0019252: starch biosynthetic process	1.60E-02
103	GO:0000302: response to reactive oxygen species	1.68E-02
104	GO:0071281: cellular response to iron ion	1.84E-02
105	GO:0006310: DNA recombination	1.93E-02
106	GO:0010027: thylakoid membrane organization	2.18E-02
107	GO:0009607: response to biotic stimulus	2.27E-02
108	GO:0009627: systemic acquired resistance	2.36E-02
109	GO:0009658: chloroplast organization	2.46E-02
110	GO:0016311: dephosphorylation	2.55E-02
111	GO:0018298: protein-chromophore linkage	2.64E-02
112	GO:0046686: response to cadmium ion	2.79E-02
113	GO:0010218: response to far red light	2.83E-02
114	GO:0009723: response to ethylene	2.85E-02
115	GO:0009631: cold acclimation	2.93E-02
116	GO:0010119: regulation of stomatal movement	2.93E-02
117	GO:0080167: response to karrikin	3.05E-02
118	GO:0009637: response to blue light	3.12E-02
119	GO:0034599: cellular response to oxidative stress	3.22E-02
120	GO:0045454: cell redox homeostasis	3.65E-02
121	GO:0010114: response to red light	3.74E-02
122	GO:0009965: leaf morphogenesis	4.06E-02
123	GO:0032259: methylation	4.30E-02
124	GO:0009737: response to abscisic acid	4.39E-02
125	GO:0009664: plant-type cell wall organization	4.40E-02
126	GO:0009585: red, far-red light phototransduction	4.62E-02
127	GO:0006857: oligopeptide transport	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0009899: ent-kaurene synthase activity	0.00E+00
2	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
3	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
4	GO:0019843: rRNA binding	5.89E-08
5	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.25E-05
6	GO:0005528: FK506 binding	3.22E-05
7	GO:0003735: structural constituent of ribosome	7.98E-05
8	GO:0048038: quinone binding	1.30E-04
9	GO:0004645: phosphorylase activity	1.71E-04
10	GO:0008184: glycogen phosphorylase activity	1.71E-04
11	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	1.71E-04
12	GO:0004853: uroporphyrinogen decarboxylase activity	1.71E-04
13	GO:0004134: 4-alpha-glucanotransferase activity	1.71E-04
14	GO:0010297: heteropolysaccharide binding	3.87E-04
15	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	3.87E-04
16	GO:0008967: phosphoglycolate phosphatase activity	3.87E-04
17	GO:0018708: thiol S-methyltransferase activity	3.87E-04
18	GO:0003844: 1,4-alpha-glucan branching enzyme activity	3.87E-04
19	GO:0045174: glutathione dehydrogenase (ascorbate) activity	6.32E-04
20	GO:0071917: triose-phosphate transmembrane transporter activity	6.32E-04
21	GO:0080054: low-affinity nitrate transmembrane transporter activity	6.32E-04
22	GO:0043169: cation binding	6.32E-04
23	GO:0017150: tRNA dihydrouridine synthase activity	6.32E-04
24	GO:0090729: toxin activity	6.32E-04
25	GO:0043621: protein self-association	6.55E-04
26	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	7.19E-04
27	GO:0016149: translation release factor activity, codon specific	9.04E-04
28	GO:0043023: ribosomal large subunit binding	9.04E-04
29	GO:0019201: nucleotide kinase activity	9.04E-04
30	GO:0016851: magnesium chelatase activity	9.04E-04
31	GO:0042277: peptide binding	1.20E-03
32	GO:0015120: phosphoglycerate transmembrane transporter activity	1.20E-03
33	GO:0019199: transmembrane receptor protein kinase activity	1.20E-03
34	GO:0016491: oxidoreductase activity	1.78E-03
35	GO:2001070: starch binding	1.87E-03
36	GO:0004332: fructose-bisphosphate aldolase activity	1.87E-03
37	GO:0004130: cytochrome-c peroxidase activity	1.87E-03
38	GO:0004602: glutathione peroxidase activity	2.24E-03
39	GO:0051920: peroxiredoxin activity	2.24E-03
40	GO:0004017: adenylate kinase activity	2.24E-03
41	GO:0016209: antioxidant activity	3.06E-03
42	GO:0004033: aldo-keto reductase (NADP) activity	3.06E-03
43	GO:0003747: translation release factor activity	3.95E-03
44	GO:0051537: 2 iron, 2 sulfur cluster binding	5.17E-03
45	GO:0044183: protein binding involved in protein folding	5.45E-03
46	GO:0047372: acylglycerol lipase activity	5.45E-03
47	GO:0003691: double-stranded telomeric DNA binding	5.45E-03
48	GO:0004089: carbonate dehydratase activity	6.54E-03
49	GO:0031409: pigment binding	8.30E-03
50	GO:0033612: receptor serine/threonine kinase binding	1.02E-02
51	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.02E-02
52	GO:0008408: 3'-5' exonuclease activity	1.02E-02
53	GO:0009055: electron carrier activity	1.09E-02
54	GO:0030570: pectate lyase activity	1.16E-02
55	GO:0050662: coenzyme binding	1.52E-02
56	GO:0005200: structural constituent of cytoskeleton	2.01E-02
57	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.01E-02
58	GO:0016168: chlorophyll binding	2.27E-02
59	GO:0008168: methyltransferase activity	2.37E-02
60	GO:0004601: peroxidase activity	2.46E-02
61	GO:0030145: manganese ion binding	2.93E-02
62	GO:0004364: glutathione transferase activity	3.64E-02

Rank	GO Term	Adjusted P value
1	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
2	GO:0009507: chloroplast	1.14E-24
3	GO:0009535: chloroplast thylakoid membrane	5.10E-23
4	GO:0009941: chloroplast envelope	8.77E-16
5	GO:0009534: chloroplast thylakoid	2.48E-15
6	GO:0009570: chloroplast stroma	2.62E-14
7	GO:0009579: thylakoid	1.82E-11
8	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.62E-08
9	GO:0009543: chloroplast thylakoid lumen	1.38E-06
10	GO:0005840: ribosome	5.57E-05
11	GO:0009538: photosystem I reaction center	1.30E-04
12	GO:0000791: euchromatin	1.71E-04
13	GO:0030870: Mre11 complex	3.87E-04
14	GO:0030093: chloroplast photosystem I	3.87E-04
15	GO:0010007: magnesium chelatase complex	6.32E-04
16	GO:0030915: Smc5-Smc6 complex	1.52E-03
17	GO:0000795: synaptonemal complex	1.52E-03
18	GO:0010287: plastoglobule	1.65E-03
19	GO:0010319: stromule	2.01E-03
20	GO:0009295: nucleoid	2.01E-03
21	GO:0010005: cortical microtubule, transverse to long axis	2.24E-03
22	GO:0009501: amyloplast	3.06E-03
23	GO:0000783: nuclear telomere cap complex	3.50E-03
24	GO:0005763: mitochondrial small ribosomal subunit	3.95E-03
25	GO:0045298: tubulin complex	3.95E-03
26	GO:0031977: thylakoid lumen	4.41E-03
27	GO:0016324: apical plasma membrane	4.93E-03
28	GO:0009536: plastid	5.63E-03
29	GO:0009508: plastid chromosome	6.54E-03
30	GO:0030659: cytoplasmic vesicle membrane	7.11E-03
31	GO:0030095: chloroplast photosystem II	7.11E-03
32	GO:0016020: membrane	7.43E-03
33	GO:0030076: light-harvesting complex	7.69E-03
34	GO:0009706: chloroplast inner membrane	9.16E-03
35	GO:0042651: thylakoid membrane	9.56E-03
36	GO:0009654: photosystem II oxygen evolving complex	9.56E-03
37	GO:0048046: apoplast	1.31E-02
38	GO:0009522: photosystem I	1.52E-02
39	GO:0009523: photosystem II	1.60E-02
40	GO:0019898: extrinsic component of membrane	1.60E-02
41	GO:0000785: chromatin	1.76E-02
42	GO:0015934: large ribosomal subunit	2.93E-02
43	GO:0000325: plant-type vacuole	2.93E-02
44	GO:0005874: microtubule	2.95E-02
45	GO:0031969: chloroplast membrane	3.05E-02
46	GO:0022625: cytosolic large ribosomal subunit	3.21E-02