co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G23170

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042353: fucose biosynthetic process	0.00E+00
2	GO:0007141: male meiosis I	0.00E+00
3	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
4	GO:0010046: response to mycotoxin	0.00E+00
5	GO:0009560: embryo sac egg cell differentiation	0.00E+00
6	GO:0010245: radial microtubular system formation	0.00E+00
7	GO:0034263: positive regulation of autophagy in response to ER overload	0.00E+00
8	GO:0009408: response to heat	5.86E-05
9	GO:0048700: acquisition of desiccation tolerance in seed	8.43E-05
10	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	8.43E-05
11	GO:0010372: positive regulation of gibberellin biosynthetic process	2.00E-04
12	GO:2000030: regulation of response to red or far red light	2.00E-04
13	GO:0007130: synaptonemal complex assembly	2.00E-04
14	GO:0043255: regulation of carbohydrate biosynthetic process	2.00E-04
15	GO:0006611: protein export from nucleus	2.00E-04
16	GO:0010289: homogalacturonan biosynthetic process	2.00E-04
17	GO:0019521: D-gluconate metabolic process	2.00E-04
18	GO:0009863: salicylic acid mediated signaling pathway	2.55E-04
19	GO:0006457: protein folding	3.18E-04
20	GO:0051176: positive regulation of sulfur metabolic process	3.35E-04
21	GO:0006081: cellular aldehyde metabolic process	3.35E-04
22	GO:0000055: ribosomal large subunit export from nucleus	3.35E-04
23	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	3.35E-04
24	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	3.35E-04
25	GO:0030100: regulation of endocytosis	4.84E-04
26	GO:0009399: nitrogen fixation	4.84E-04
27	GO:0009558: embryo sac cellularization	4.84E-04
28	GO:0006986: response to unfolded protein	4.84E-04
29	GO:0006536: glutamate metabolic process	6.44E-04
30	GO:0007112: male meiosis cytokinesis	6.44E-04
31	GO:0001709: cell fate determination	6.44E-04
32	GO:0009694: jasmonic acid metabolic process	6.44E-04
33	GO:0006090: pyruvate metabolic process	8.14E-04
34	GO:0045038: protein import into chloroplast thylakoid membrane	8.14E-04
35	GO:0007029: endoplasmic reticulum organization	8.14E-04
36	GO:0009435: NAD biosynthetic process	8.14E-04
37	GO:0009816: defense response to bacterium, incompatible interaction	9.39E-04
38	GO:0006796: phosphate-containing compound metabolic process	9.94E-04
39	GO:0010256: endomembrane system organization	9.94E-04
40	GO:0048232: male gamete generation	9.94E-04
41	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.18E-03
42	GO:0010311: lateral root formation	1.20E-03
43	GO:0009834: plant-type secondary cell wall biogenesis	1.26E-03
44	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.39E-03
45	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.39E-03
46	GO:0006401: RNA catabolic process	1.39E-03
47	GO:0046686: response to cadmium ion	1.54E-03
48	GO:1900150: regulation of defense response to fungus	1.60E-03
49	GO:0006402: mRNA catabolic process	1.60E-03
50	GO:2000070: regulation of response to water deprivation	1.60E-03
51	GO:0007155: cell adhesion	1.60E-03
52	GO:0030968: endoplasmic reticulum unfolded protein response	1.83E-03
53	GO:0010208: pollen wall assembly	1.83E-03
54	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	2.06E-03
55	GO:0009060: aerobic respiration	2.06E-03
56	GO:0098656: anion transmembrane transport	2.06E-03
57	GO:0046685: response to arsenic-containing substance	2.06E-03
58	GO:0009051: pentose-phosphate shunt, oxidative branch	2.06E-03
59	GO:0000387: spliceosomal snRNP assembly	2.30E-03
60	GO:0051026: chiasma assembly	2.56E-03
61	GO:0048829: root cap development	2.56E-03
62	GO:0009750: response to fructose	2.82E-03
63	GO:0048229: gametophyte development	2.82E-03
64	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.09E-03
65	GO:0071365: cellular response to auxin stimulus	3.09E-03
66	GO:0006108: malate metabolic process	3.37E-03
67	GO:0009624: response to nematode	3.50E-03
68	GO:0010143: cutin biosynthetic process	3.66E-03
69	GO:0034605: cellular response to heat	3.66E-03
70	GO:0009969: xyloglucan biosynthetic process	3.95E-03
71	GO:0009873: ethylene-activated signaling pathway	4.01E-03
72	GO:0010025: wax biosynthetic process	4.26E-03
73	GO:0042753: positive regulation of circadian rhythm	4.26E-03
74	GO:0009833: plant-type primary cell wall biogenesis	4.26E-03
75	GO:2000377: regulation of reactive oxygen species metabolic process	4.57E-03
76	GO:0051260: protein homooligomerization	5.22E-03
77	GO:0061077: chaperone-mediated protein folding	5.22E-03
78	GO:0006633: fatty acid biosynthetic process	5.48E-03
79	GO:0016226: iron-sulfur cluster assembly	5.55E-03
80	GO:0007131: reciprocal meiotic recombination	5.55E-03
81	GO:0030433: ubiquitin-dependent ERAD pathway	5.55E-03
82	GO:0031348: negative regulation of defense response	5.55E-03
83	GO:0009686: gibberellin biosynthetic process	5.89E-03
84	GO:0009306: protein secretion	6.24E-03
85	GO:0000271: polysaccharide biosynthetic process	6.97E-03
86	GO:0045489: pectin biosynthetic process	7.34E-03
87	GO:0007018: microtubule-based movement	7.72E-03
88	GO:0009749: response to glucose	8.10E-03
89	GO:0010193: response to ozone	8.50E-03
90	GO:0031047: gene silencing by RNA	8.90E-03
91	GO:0006914: autophagy	9.72E-03
92	GO:0006310: DNA recombination	9.72E-03
93	GO:0010286: heat acclimation	1.01E-02
94	GO:0007267: cell-cell signaling	1.01E-02
95	GO:0009737: response to abscisic acid	1.04E-02
96	GO:0000910: cytokinesis	1.06E-02
97	GO:0001666: response to hypoxia	1.10E-02
98	GO:0009615: response to virus	1.10E-02
99	GO:0009627: systemic acquired resistance	1.19E-02
100	GO:0046777: protein autophosphorylation	1.24E-02
101	GO:0030244: cellulose biosynthetic process	1.33E-02
102	GO:0006499: N-terminal protein myristoylation	1.42E-02
103	GO:0010119: regulation of stomatal movement	1.47E-02
104	GO:0071555: cell wall organization	1.47E-02
105	GO:0016051: carbohydrate biosynthetic process	1.57E-02
106	GO:0009637: response to blue light	1.57E-02
107	GO:0006631: fatty acid metabolic process	1.77E-02
108	GO:0006897: endocytosis	1.77E-02
109	GO:0048364: root development	1.78E-02
110	GO:0006397: mRNA processing	1.78E-02
111	GO:0042542: response to hydrogen peroxide	1.83E-02
112	GO:0009640: photomorphogenesis	1.88E-02
113	GO:0009744: response to sucrose	1.88E-02
114	GO:0009644: response to high light intensity	1.99E-02
115	GO:0006260: DNA replication	2.15E-02
116	GO:0009809: lignin biosynthetic process	2.32E-02
117	GO:0006364: rRNA processing	2.32E-02
118	GO:0009585: red, far-red light phototransduction	2.32E-02
119	GO:0010224: response to UV-B	2.38E-02
120	GO:0006468: protein phosphorylation	2.48E-02
121	GO:0043086: negative regulation of catalytic activity	2.62E-02
122	GO:0048316: seed development	2.68E-02
123	GO:0048367: shoot system development	2.68E-02
124	GO:0009620: response to fungus	2.80E-02
125	GO:0009553: embryo sac development	2.92E-02
126	GO:0042545: cell wall modification	2.92E-02
127	GO:0009555: pollen development	3.04E-02
128	GO:0009416: response to light stimulus	3.04E-02
129	GO:0009611: response to wounding	3.10E-02
130	GO:0009742: brassinosteroid mediated signaling pathway	3.11E-02
131	GO:0000398: mRNA splicing, via spliceosome	3.30E-02
132	GO:0009845: seed germination	3.70E-02
133	GO:0006511: ubiquitin-dependent protein catabolic process	4.11E-02
134	GO:0006952: defense response	4.27E-02
135	GO:0007623: circadian rhythm	4.40E-02
136	GO:0045490: pectin catabolic process	4.40E-02
137	GO:0007166: cell surface receptor signaling pathway	4.84E-02
138	GO:0008380: RNA splicing	4.99E-02
139	GO:0009617: response to bacterium	4.99E-02
140	GO:0010468: regulation of gene expression	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0070566: adenylyltransferase activity	0.00E+00
2	GO:0008987: quinolinate synthetase A activity	0.00E+00
3	GO:0033721: aldehyde dehydrogenase (NADP+) activity	0.00E+00
4	GO:0030621: U4 snRNA binding	0.00E+00
5	GO:0080123: jasmonate-amino synthetase activity	0.00E+00
6	GO:0017070: U6 snRNA binding	1.12E-05
7	GO:0030544: Hsp70 protein binding	8.43E-05
8	GO:0031957: very long-chain fatty acid-CoA ligase activity	8.43E-05
9	GO:0008114: phosphogluconate 2-dehydrogenase activity	8.43E-05
10	GO:0036002: pre-mRNA binding	2.00E-04
11	GO:0004540: ribonuclease activity	3.11E-04
12	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	3.35E-04
13	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	3.35E-04
14	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	4.84E-04
15	GO:0043023: ribosomal large subunit binding	4.84E-04
16	GO:0004351: glutamate decarboxylase activity	4.84E-04
17	GO:0043015: gamma-tubulin binding	6.44E-04
18	GO:0004470: malic enzyme activity	6.44E-04
19	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	6.44E-04
20	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	6.44E-04
21	GO:0008948: oxaloacetate decarboxylase activity	8.14E-04
22	GO:0002020: protease binding	8.14E-04
23	GO:0004356: glutamate-ammonia ligase activity	8.14E-04
24	GO:0009922: fatty acid elongase activity	8.14E-04
25	GO:0004029: aldehyde dehydrogenase (NAD) activity	9.94E-04
26	GO:0016462: pyrophosphatase activity	9.94E-04
27	GO:0102391: decanoate--CoA ligase activity	1.18E-03
28	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.18E-03
29	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.18E-03
30	GO:0019899: enzyme binding	1.39E-03
31	GO:0004467: long-chain fatty acid-CoA ligase activity	1.39E-03
32	GO:0004143: diacylglycerol kinase activity	1.39E-03
33	GO:0004427: inorganic diphosphatase activity	1.39E-03
34	GO:0003951: NAD+ kinase activity	1.83E-03
35	GO:0005524: ATP binding	2.22E-03
36	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	2.30E-03
37	GO:0008047: enzyme activator activity	2.56E-03
38	GO:0031625: ubiquitin protein ligase binding	2.73E-03
39	GO:0004521: endoribonuclease activity	3.09E-03
40	GO:0000175: 3'-5'-exoribonuclease activity	3.37E-03
41	GO:0005315: inorganic phosphate transmembrane transporter activity	3.37E-03
42	GO:0004674: protein serine/threonine kinase activity	3.46E-03
43	GO:0051082: unfolded protein binding	3.50E-03
44	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.26E-03
45	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.26E-03
46	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.26E-03
47	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	5.55E-03
48	GO:0016760: cellulose synthase (UDP-forming) activity	5.89E-03
49	GO:0008514: organic anion transmembrane transporter activity	6.24E-03
50	GO:0008017: microtubule binding	6.29E-03
51	GO:0008536: Ran GTPase binding	7.34E-03
52	GO:0004518: nuclease activity	8.90E-03
53	GO:0016759: cellulose synthase activity	9.72E-03
54	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.28E-02
55	GO:0016301: kinase activity	1.42E-02
56	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.47E-02
57	GO:0051539: 4 iron, 4 sulfur cluster binding	1.72E-02
58	GO:0043621: protein self-association	1.99E-02
59	GO:0051287: NAD binding	2.15E-02
60	GO:0004842: ubiquitin-protein transferase activity	2.21E-02
61	GO:0004672: protein kinase activity	2.39E-02
62	GO:0003729: mRNA binding	2.43E-02
63	GO:0003777: microtubule motor activity	2.50E-02
64	GO:0045330: aspartyl esterase activity	2.50E-02
65	GO:0030599: pectinesterase activity	2.86E-02
66	GO:0003779: actin binding	2.92E-02
67	GO:0000166: nucleotide binding	3.04E-02
68	GO:0046872: metal ion binding	3.12E-02
69	GO:0016758: transferase activity, transferring hexosyl groups	3.44E-02
70	GO:0030170: pyridoxal phosphate binding	3.77E-02
71	GO:0015144: carbohydrate transmembrane transporter activity	3.98E-02
72	GO:0008565: protein transporter activity	3.98E-02
73	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.00E-02
74	GO:0030246: carbohydrate binding	4.07E-02
75	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.19E-02
76	GO:0046910: pectinesterase inhibitor activity	4.19E-02
77	GO:0005351: sugar:proton symporter activity	4.33E-02

Rank	GO Term	Adjusted P value
1	GO:0016442: RISC complex	8.43E-05
2	GO:0009506: plasmodesma	9.04E-05
3	GO:0071007: U2-type catalytic step 2 spliceosome	2.00E-04
4	GO:0080085: signal recognition particle, chloroplast targeting	2.00E-04
5	GO:0071006: U2-type catalytic step 1 spliceosome	4.84E-04
6	GO:0000178: exosome (RNase complex)	8.14E-04
7	GO:0000932: P-body	8.91E-04
8	GO:0000974: Prp19 complex	9.94E-04
9	GO:0016363: nuclear matrix	1.18E-03
10	GO:0030173: integral component of Golgi membrane	1.18E-03
11	GO:0046540: U4/U6 x U5 tri-snRNP complex	1.83E-03
12	GO:0010494: cytoplasmic stress granule	2.06E-03
13	GO:0005768: endosome	2.80E-03
14	GO:0048471: perinuclear region of cytoplasm	2.82E-03
15	GO:0019013: viral nucleocapsid	3.37E-03
16	GO:0005737: cytoplasm	3.75E-03
17	GO:0009536: plastid	4.49E-03
18	GO:0005794: Golgi apparatus	6.16E-03
19	GO:0005871: kinesin complex	6.60E-03
20	GO:0000790: nuclear chromatin	6.60E-03
21	GO:0005886: plasma membrane	9.42E-03
22	GO:0032580: Golgi cisterna membrane	9.72E-03
23	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.02E-02
24	GO:0005802: trans-Golgi network	1.09E-02
25	GO:0005643: nuclear pore	1.33E-02
26	GO:0019005: SCF ubiquitin ligase complex	1.33E-02
27	GO:0009505: plant-type cell wall	1.96E-02
28	GO:0005829: cytosol	1.97E-02
29	GO:0000139: Golgi membrane	2.16E-02
30	GO:0005635: nuclear envelope	2.44E-02
31	GO:0005618: cell wall	2.62E-02
32	GO:0005681: spliceosomal complex	2.62E-02
33	GO:0016607: nuclear speck	2.68E-02
34	GO:0009524: phragmoplast	3.64E-02