Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G22940

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071000: response to magnetism0.00E+00
2GO:0019279: L-methionine biosynthetic process from L-homoserine via cystathionine0.00E+00
3GO:0032928: regulation of superoxide anion generation0.00E+00
4GO:1904215: regulation of protein import into chloroplast stroma0.00E+00
5GO:0009583: detection of light stimulus0.00E+00
6GO:0010117: photoprotection5.53E-07
7GO:0019343: cysteine biosynthetic process via cystathionine1.39E-05
8GO:0072387: flavin adenine dinucleotide metabolic process1.39E-05
9GO:0097502: mannosylation1.39E-05
10GO:0071266: 'de novo' L-methionine biosynthetic process1.39E-05
11GO:0019346: transsulfuration1.39E-05
12GO:0010617: circadian regulation of calcium ion oscillation3.65E-05
13GO:0099402: plant organ development3.65E-05
14GO:0048209: regulation of vesicle targeting, to, from or within Golgi3.65E-05
15GO:0006996: organelle organization3.65E-05
16GO:0016122: xanthophyll metabolic process3.65E-05
17GO:0010343: singlet oxygen-mediated programmed cell death3.65E-05
18GO:1901529: positive regulation of anion channel activity3.65E-05
19GO:1902448: positive regulation of shade avoidance6.55E-05
20GO:1901672: positive regulation of systemic acquired resistance6.55E-05
21GO:1901332: negative regulation of lateral root development9.94E-05
22GO:0009399: nitrogen fixation9.94E-05
23GO:1902347: response to strigolactone1.37E-04
24GO:0034613: cellular protein localization1.37E-04
25GO:0006542: glutamine biosynthetic process1.37E-04
26GO:0046283: anthocyanin-containing compound metabolic process1.78E-04
27GO:0060918: auxin transport2.22E-04
28GO:1901371: regulation of leaf morphogenesis2.22E-04
29GO:0010310: regulation of hydrogen peroxide metabolic process2.68E-04
30GO:0010244: response to low fluence blue light stimulus by blue low-fluence system2.68E-04
31GO:0051510: regulation of unidimensional cell growth3.15E-04
32GO:0001522: pseudouridine synthesis3.65E-04
33GO:0098656: anion transmembrane transport4.68E-04
34GO:1900426: positive regulation of defense response to bacterium5.23E-04
35GO:0009638: phototropism5.23E-04
36GO:0009688: abscisic acid biosynthetic process5.78E-04
37GO:0045037: protein import into chloroplast stroma6.93E-04
38GO:0010075: regulation of meristem growth7.52E-04
39GO:0009785: blue light signaling pathway7.52E-04
40GO:0000162: tryptophan biosynthetic process9.38E-04
41GO:0009658: chloroplast organization9.79E-04
42GO:2000377: regulation of reactive oxygen species metabolic process1.00E-03
43GO:0016226: iron-sulfur cluster assembly1.20E-03
44GO:0010051: xylem and phloem pattern formation1.49E-03
45GO:0010087: phloem or xylem histogenesis1.49E-03
46GO:0010118: stomatal movement1.49E-03
47GO:0042752: regulation of circadian rhythm1.64E-03
48GO:0009646: response to absence of light1.64E-03
49GO:0006891: intra-Golgi vesicle-mediated transport1.80E-03
50GO:0042128: nitrate assimilation2.48E-03
51GO:0006906: vesicle fusion2.48E-03
52GO:0006888: ER to Golgi vesicle-mediated transport2.57E-03
53GO:0018298: protein-chromophore linkage2.75E-03
54GO:0010218: response to far red light2.94E-03
55GO:0009637: response to blue light3.22E-03
56GO:0006897: endocytosis3.63E-03
57GO:0010114: response to red light3.83E-03
58GO:0009640: photomorphogenesis3.83E-03
59GO:0009644: response to high light intensity4.04E-03
60GO:0009965: leaf morphogenesis4.15E-03
61GO:0006486: protein glycosylation4.69E-03
62GO:0009058: biosynthetic process7.25E-03
63GO:0007623: circadian rhythm8.74E-03
64GO:0006470: protein dephosphorylation9.60E-03
65GO:0009737: response to abscisic acid1.31E-02
66GO:0046777: protein autophosphorylation1.45E-02
67GO:0032259: methylation1.77E-02
68GO:0009416: response to light stimulus2.74E-02
69GO:0009555: pollen development2.74E-02
70GO:0045893: positive regulation of transcription, DNA-templated3.03E-02
71GO:0055085: transmembrane transport3.25E-02
72GO:0006457: protein folding3.30E-02
73GO:0009414: response to water deprivation4.46E-02
74GO:0006979: response to oxidative stress4.56E-02
75GO:0009733: response to auxin4.93E-02
RankGO TermAdjusted P value
1GO:0052925: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity0.00E+00
2GO:0000033: alpha-1,3-mannosyltransferase activity0.00E+00
3GO:0004123: cystathionine gamma-lyase activity1.39E-05
4GO:0004048: anthranilate phosphoribosyltransferase activity1.39E-05
5GO:0004121: cystathionine beta-lyase activity1.39E-05
6GO:0052917: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity1.39E-05
7GO:0015929: hexosaminidase activity3.65E-05
8GO:0004563: beta-N-acetylhexosaminidase activity3.65E-05
9GO:0003962: cystathionine gamma-synthase activity6.55E-05
10GO:0009882: blue light photoreceptor activity9.94E-05
11GO:0004356: glutamate-ammonia ligase activity1.78E-04
12GO:0004386: helicase activity4.15E-04
13GO:0071949: FAD binding4.68E-04
14GO:0005315: inorganic phosphate transmembrane transporter activity7.52E-04
15GO:0009982: pseudouridine synthase activity7.52E-04
16GO:0008514: organic anion transmembrane transporter activity1.34E-03
17GO:0005096: GTPase activator activity2.84E-03
18GO:0000149: SNARE binding3.42E-03
19GO:0005484: SNAP receptor activity3.83E-03
20GO:0051537: 2 iron, 2 sulfur cluster binding4.04E-03
21GO:0035091: phosphatidylinositol binding4.04E-03
22GO:0005198: structural molecule activity4.15E-03
23GO:0016874: ligase activity5.74E-03
24GO:0051082: unfolded protein binding5.98E-03
25GO:0030170: pyridoxal phosphate binding7.51E-03
26GO:0015144: carbohydrate transmembrane transporter activity7.91E-03
27GO:0005351: sugar:proton symporter activity8.60E-03
28GO:0042802: identical protein binding1.03E-02
29GO:0008168: methyltransferase activity1.16E-02
30GO:0016787: hydrolase activity1.32E-02
31GO:0008233: peptidase activity1.37E-02
32GO:0005515: protein binding1.43E-02
33GO:0042803: protein homodimerization activity1.62E-02
34GO:0004722: protein serine/threonine phosphatase activity1.68E-02
35GO:0016887: ATPase activity2.49E-02
36GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.34E-02
37GO:0005507: copper ion binding3.53E-02
38GO:0005506: iron ion binding4.49E-02
39GO:0003723: RNA binding4.81E-02
40GO:0003824: catalytic activity4.85E-02
RankGO TermAdjusted P value
1GO:0016605: PML body6.55E-05
2GO:0005797: Golgi medial cisterna6.55E-05
3GO:0009517: PSII associated light-harvesting complex II1.37E-04
4GO:0030140: trans-Golgi network transport vesicle2.22E-04
5GO:0005801: cis-Golgi network2.68E-04
6GO:0016604: nuclear body5.23E-04
7GO:0009941: chloroplast envelope9.90E-04
8GO:0031969: chloroplast membrane1.20E-03
9GO:0009570: chloroplast stroma1.63E-03
10GO:0005643: nuclear pore2.75E-03
11GO:0009707: chloroplast outer membrane2.75E-03
12GO:0031201: SNARE complex3.63E-03
13GO:0005802: trans-Golgi network4.88E-03
14GO:0016607: nuclear speck5.38E-03
15GO:0005768: endosome5.54E-03
16GO:0005773: vacuole6.44E-03
17GO:0005759: mitochondrial matrix8.19E-03
18GO:0005789: endoplasmic reticulum membrane9.41E-03
19GO:0005829: cytosol1.39E-02
20GO:0022626: cytosolic ribosome2.66E-02
21GO:0005794: Golgi apparatus3.01E-02
22GO:0016021: integral component of membrane4.36E-02
23GO:0009507: chloroplast4.87E-02
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Gene type



Gene DE type