co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G22930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006097: glyoxylate cycle	8.26E-07
2	GO:0061014: positive regulation of mRNA catabolic process	1.77E-05
3	GO:0010265: SCF complex assembly	1.77E-05
4	GO:0019605: butyrate metabolic process	1.77E-05
5	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	1.77E-05
6	GO:0006083: acetate metabolic process	1.77E-05
7	GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic	1.77E-05
8	GO:0006101: citrate metabolic process	4.61E-05
9	GO:0010051: xylem and phloem pattern formation	5.72E-05
10	GO:0061158: 3'-UTR-mediated mRNA destabilization	8.18E-05
11	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	8.18E-05
12	GO:0010587: miRNA catabolic process	1.23E-04
13	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.69E-04
14	GO:0098719: sodium ion import across plasma membrane	2.19E-04
15	GO:0009435: NAD biosynthetic process	2.19E-04
16	GO:0031930: mitochondria-nucleus signaling pathway	3.27E-04
17	GO:0006694: steroid biosynthetic process	3.27E-04
18	GO:0010019: chloroplast-nucleus signaling pathway	3.27E-04
19	GO:0070370: cellular heat acclimation	3.84E-04
20	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	3.84E-04
21	GO:0010044: response to aluminum ion	3.84E-04
22	GO:0009610: response to symbiotic fungus	3.84E-04
23	GO:0006096: glycolytic process	4.26E-04
24	GO:0009819: drought recovery	4.43E-04
25	GO:0006402: mRNA catabolic process	4.43E-04
26	GO:0040029: regulation of gene expression, epigenetic	4.43E-04
27	GO:0006102: isocitrate metabolic process	4.43E-04
28	GO:0009737: response to abscisic acid	4.79E-04
29	GO:0009060: aerobic respiration	5.68E-04
30	GO:0051453: regulation of intracellular pH	6.32E-04
31	GO:0010072: primary shoot apical meristem specification	7.68E-04
32	GO:0016485: protein processing	7.68E-04
33	GO:0006094: gluconeogenesis	9.08E-04
34	GO:0090351: seedling development	1.06E-03
35	GO:0009695: jasmonic acid biosynthetic process	1.29E-03
36	GO:0031408: oxylipin biosynthetic process	1.37E-03
37	GO:0010431: seed maturation	1.37E-03
38	GO:0030433: ubiquitin-dependent ERAD pathway	1.46E-03
39	GO:0001944: vasculature development	1.54E-03
40	GO:0010154: fruit development	1.90E-03
41	GO:0010197: polar nucleus fusion	1.90E-03
42	GO:0006886: intracellular protein transport	1.97E-03
43	GO:0006814: sodium ion transport	2.00E-03
44	GO:0006623: protein targeting to vacuole	2.09E-03
45	GO:0009630: gravitropism	2.29E-03
46	GO:0006914: autophagy	2.49E-03
47	GO:0010286: heat acclimation	2.60E-03
48	GO:0071805: potassium ion transmembrane transport	2.60E-03
49	GO:0051607: defense response to virus	2.70E-03
50	GO:0016126: sterol biosynthetic process	2.80E-03
51	GO:0009817: defense response to fungus, incompatible interaction	3.36E-03
52	GO:0009867: jasmonic acid mediated signaling pathway	3.94E-03
53	GO:0006099: tricarboxylic acid cycle	4.06E-03
54	GO:0000209: protein polyubiquitination	4.81E-03
55	GO:0009651: response to salt stress	5.29E-03
56	GO:0009733: response to auxin	9.32E-03
57	GO:0015031: protein transport	1.06E-02
58	GO:0009451: RNA modification	1.09E-02
59	GO:0010228: vegetative to reproductive phase transition of meristem	1.11E-02
60	GO:0046686: response to cadmium ion	1.30E-02
61	GO:0009826: unidimensional cell growth	1.42E-02
62	GO:0006970: response to osmotic stress	1.54E-02
63	GO:0009723: response to ethylene	1.62E-02
64	GO:0016192: vesicle-mediated transport	1.77E-02
65	GO:0045892: negative regulation of transcription, DNA-templated	1.96E-02
66	GO:0006397: mRNA processing	2.32E-02
67	GO:0008152: metabolic process	2.41E-02
68	GO:0009873: ethylene-activated signaling pathway	2.70E-02
69	GO:0051301: cell division	3.60E-02
70	GO:0055085: transmembrane transport	4.01E-02

Rank	GO Term	Adjusted P value
1	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
2	GO:0008734: L-aspartate oxidase activity	0.00E+00
3	GO:0047760: butyrate-CoA ligase activity	1.77E-05
4	GO:0034450: ubiquitin-ubiquitin ligase activity	1.77E-05
5	GO:0004321: fatty-acyl-CoA synthase activity	1.77E-05
6	GO:0004347: glucose-6-phosphate isomerase activity	1.77E-05
7	GO:0003987: acetate-CoA ligase activity	1.77E-05
8	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	4.61E-05
9	GO:0004534: 5'-3' exoribonuclease activity	4.61E-05
10	GO:0003994: aconitate hydratase activity	4.61E-05
11	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	8.18E-05
12	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	1.23E-04
13	GO:0008409: 5'-3' exonuclease activity	1.69E-04
14	GO:0031593: polyubiquitin binding	2.72E-04
15	GO:0016208: AMP binding	2.72E-04
16	GO:0016207: 4-coumarate-CoA ligase activity	5.68E-04
17	GO:0015386: potassium:proton antiporter activity	7.68E-04
18	GO:0008270: zinc ion binding	1.44E-03
19	GO:0003727: single-stranded RNA binding	1.63E-03
20	GO:0001085: RNA polymerase II transcription factor binding	1.90E-03
21	GO:0042803: protein homodimerization activity	1.99E-03
22	GO:0015385: sodium:proton antiporter activity	2.39E-03
23	GO:0004222: metalloendopeptidase activity	3.59E-03
24	GO:0016887: ATPase activity	3.60E-03
25	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.70E-03
26	GO:0051539: 4 iron, 4 sulfur cluster binding	4.31E-03
27	GO:0005524: ATP binding	4.96E-03
28	GO:0016874: ligase activity	7.04E-03
29	GO:0016746: transferase activity, transferring acyl groups	7.49E-03
30	GO:0005215: transporter activity	9.18E-03
31	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	9.39E-03
32	GO:0003729: mRNA binding	1.24E-02
33	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.27E-02
34	GO:0046982: protein heterodimerization activity	1.44E-02
35	GO:0003682: chromatin binding	1.52E-02
36	GO:0004519: endonuclease activity	2.39E-02
37	GO:0005515: protein binding	2.62E-02
38	GO:0005507: copper ion binding	4.36E-02

Rank	GO Term	Adjusted P value
1	GO:0045254: pyruvate dehydrogenase complex	4.61E-05
2	GO:0030124: AP-4 adaptor complex	8.18E-05
3	GO:0005844: polysome	1.69E-04
4	GO:0005776: autophagosome	1.69E-04
5	GO:0005829: cytosol	1.69E-04
6	GO:0030131: clathrin adaptor complex	4.43E-04
7	GO:0010494: cytoplasmic stress granule	5.68E-04
8	GO:0017119: Golgi transport complex	6.99E-04
9	GO:0030125: clathrin vesicle coat	6.99E-04
10	GO:0005759: mitochondrial matrix	7.87E-04
11	GO:0005750: mitochondrial respiratory chain complex III	9.82E-04
12	GO:0005758: mitochondrial intermembrane space	1.21E-03
13	GO:0005741: mitochondrial outer membrane	1.37E-03
14	GO:0005905: clathrin-coated pit	1.37E-03
15	GO:0031410: cytoplasmic vesicle	1.46E-03
16	GO:0032580: Golgi cisterna membrane	2.49E-03
17	GO:0000932: P-body	2.80E-03
18	GO:0005667: transcription factor complex	3.02E-03
19	GO:0000151: ubiquitin ligase complex	3.36E-03
20	GO:0000325: plant-type vacuole	3.70E-03
21	GO:0005777: peroxisome	4.71E-03
22	GO:0031966: mitochondrial membrane	5.48E-03
23	GO:0005774: vacuolar membrane	5.51E-03
24	GO:0005618: cell wall	6.54E-03
25	GO:0005802: trans-Golgi network	6.57E-03
26	GO:0010008: endosome membrane	6.60E-03
27	GO:0005768: endosome	7.47E-03
28	GO:0005743: mitochondrial inner membrane	2.14E-02
29	GO:0005886: plasma membrane	2.65E-02
30	GO:0005887: integral component of plasma membrane	2.80E-02
31	GO:0005773: vacuole	4.42E-02