co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G22920

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0001881: receptor recycling	0.00E+00
2	GO:0006511: ubiquitin-dependent protein catabolic process	8.13E-05
3	GO:0015786: UDP-glucose transport	1.20E-04
4	GO:2000072: regulation of defense response to fungus, incompatible interaction	1.20E-04
5	GO:0015783: GDP-fucose transport	2.06E-04
6	GO:0034227: tRNA thio-modification	2.06E-04
7	GO:0008333: endosome to lysosome transport	2.06E-04
8	GO:0006168: adenine salvage	3.01E-04
9	GO:0006882: cellular zinc ion homeostasis	3.01E-04
10	GO:0001676: long-chain fatty acid metabolic process	3.01E-04
11	GO:0046513: ceramide biosynthetic process	3.01E-04
12	GO:0006166: purine ribonucleoside salvage	3.01E-04
13	GO:0072334: UDP-galactose transmembrane transport	3.01E-04
14	GO:0030163: protein catabolic process	3.54E-04
15	GO:0044209: AMP salvage	5.13E-04
16	GO:0045116: protein neddylation	5.13E-04
17	GO:0002238: response to molecule of fungal origin	6.29E-04
18	GO:0009612: response to mechanical stimulus	7.50E-04
19	GO:0009690: cytokinin metabolic process	1.01E-03
20	GO:0006506: GPI anchor biosynthetic process	1.01E-03
21	GO:0001510: RNA methylation	1.14E-03
22	GO:0046685: response to arsenic-containing substance	1.28E-03
23	GO:0042761: very long-chain fatty acid biosynthetic process	1.43E-03
24	GO:0071577: zinc II ion transmembrane transport	1.43E-03
25	GO:0015031: protein transport	1.57E-03
26	GO:0006378: mRNA polyadenylation	1.75E-03
27	GO:0006626: protein targeting to mitochondrion	2.08E-03
28	GO:0007034: vacuolar transport	2.26E-03
29	GO:0034976: response to endoplasmic reticulum stress	2.62E-03
30	GO:0006289: nucleotide-excision repair	2.81E-03
31	GO:0009116: nucleoside metabolic process	2.81E-03
32	GO:0010187: negative regulation of seed germination	2.81E-03
33	GO:0007005: mitochondrion organization	3.41E-03
34	GO:0019722: calcium-mediated signaling	3.82E-03
35	GO:0042147: retrograde transport, endosome to Golgi	4.04E-03
36	GO:0000413: protein peptidyl-prolyl isomerization	4.26E-03
37	GO:0006623: protein targeting to vacuole	4.94E-03
38	GO:0080156: mitochondrial mRNA modification	5.18E-03
39	GO:0010193: response to ozone	5.18E-03
40	GO:0006914: autophagy	5.91E-03
41	GO:0006950: response to stress	7.48E-03
42	GO:0010043: response to zinc ion	8.88E-03
43	GO:0009867: jasmonic acid mediated signaling pathway	9.47E-03
44	GO:0045087: innate immune response	9.47E-03
45	GO:0030001: metal ion transport	1.04E-02
46	GO:0006631: fatty acid metabolic process	1.07E-02
47	GO:0009926: auxin polar transport	1.13E-02
48	GO:0051603: proteolysis involved in cellular protein catabolic process	1.43E-02
49	GO:0006396: RNA processing	1.83E-02
50	GO:0009742: brassinosteroid mediated signaling pathway	1.87E-02
51	GO:0006457: protein folding	1.92E-02
52	GO:0007623: circadian rhythm	2.65E-02
53	GO:0009739: response to gibberellin	2.87E-02
54	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.87E-02
55	GO:0008380: RNA splicing	3.00E-02
56	GO:0042254: ribosome biogenesis	3.66E-02
57	GO:0046686: response to cadmium ion	4.65E-02
58	GO:0045454: cell redox homeostasis	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0016881: acid-amino acid ligase activity	0.00E+00
2	GO:0004298: threonine-type endopeptidase activity	2.33E-08
3	GO:0008233: peptidase activity	1.40E-07
4	GO:0050291: sphingosine N-acyltransferase activity	1.20E-04
5	GO:0019781: NEDD8 activating enzyme activity	1.20E-04
6	GO:0008805: carbon-monoxide oxygenase activity	1.20E-04
7	GO:0005457: GDP-fucose transmembrane transporter activity	2.06E-04
8	GO:0008430: selenium binding	2.06E-04
9	GO:0003999: adenine phosphoribosyltransferase activity	3.01E-04
10	GO:0005460: UDP-glucose transmembrane transporter activity	3.01E-04
11	GO:0070628: proteasome binding	4.04E-04
12	GO:0005459: UDP-galactose transmembrane transporter activity	5.13E-04
13	GO:0008641: small protein activating enzyme activity	5.13E-04
14	GO:0031593: polyubiquitin binding	6.29E-04
15	GO:0102391: decanoate--CoA ligase activity	7.50E-04
16	GO:0004467: long-chain fatty acid-CoA ligase activity	8.75E-04
17	GO:0008173: RNA methyltransferase activity	1.14E-03
18	GO:0000989: transcription factor activity, transcription factor binding	1.28E-03
19	GO:0045309: protein phosphorylated amino acid binding	1.43E-03
20	GO:0019904: protein domain specific binding	1.75E-03
21	GO:0008327: methyl-CpG binding	1.75E-03
22	GO:0003729: mRNA binding	2.00E-03
23	GO:0000166: nucleotide binding	2.41E-03
24	GO:0004190: aspartic-type endopeptidase activity	2.44E-03
25	GO:0005385: zinc ion transmembrane transporter activity	2.81E-03
26	GO:0043130: ubiquitin binding	2.81E-03
27	GO:0003756: protein disulfide isomerase activity	3.82E-03
28	GO:0008514: organic anion transmembrane transporter activity	3.82E-03
29	GO:0046873: metal ion transmembrane transporter activity	4.48E-03
30	GO:0016853: isomerase activity	4.71E-03
31	GO:0003684: damaged DNA binding	5.91E-03
32	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	8.03E-03
33	GO:0003746: translation elongation factor activity	9.47E-03
34	GO:0003697: single-stranded DNA binding	9.47E-03
35	GO:0043621: protein self-association	1.20E-02
36	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.26E-02
37	GO:0022857: transmembrane transporter activity	1.72E-02
38	GO:0008565: protein transporter activity	2.39E-02
39	GO:0008017: microtubule binding	2.73E-02
40	GO:0005515: protein binding	3.24E-02
41	GO:0046982: protein heterodimerization activity	3.56E-02

Rank	GO Term	Adjusted P value
1	GO:0005839: proteasome core complex	2.33E-08
2	GO:0000502: proteasome complex	6.48E-08
3	GO:0019773: proteasome core complex, alpha-subunit complex	1.40E-07
4	GO:0046861: glyoxysomal membrane	2.06E-04
5	GO:0005849: mRNA cleavage factor complex	3.01E-04
6	GO:0005829: cytosol	3.38E-04
7	GO:0030660: Golgi-associated vesicle membrane	4.04E-04
8	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	4.04E-04
9	GO:0005771: multivesicular body	6.29E-04
10	GO:0030904: retromer complex	6.29E-04
11	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.01E-03
12	GO:0000421: autophagosome membrane	1.01E-03
13	GO:0005794: Golgi apparatus	1.05E-03
14	GO:0009514: glyoxysome	1.14E-03
15	GO:0005783: endoplasmic reticulum	1.61E-03
16	GO:0005774: vacuolar membrane	1.73E-03
17	GO:0005765: lysosomal membrane	1.75E-03
18	GO:0005732: small nucleolar ribonucleoprotein complex	1.88E-03
19	GO:0022626: cytosolic ribosome	2.28E-03
20	GO:0005758: mitochondrial intermembrane space	2.81E-03
21	GO:0031410: cytoplasmic vesicle	3.41E-03
22	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.99E-03
23	GO:0005737: cytoplasm	5.14E-03
24	GO:0005788: endoplasmic reticulum lumen	6.94E-03
25	GO:0019005: SCF ubiquitin ligase complex	8.03E-03
26	GO:0005789: endoplasmic reticulum membrane	1.01E-02
27	GO:0005819: spindle	1.01E-02
28	GO:0031902: late endosome membrane	1.07E-02
29	GO:0005681: spliceosomal complex	1.57E-02
30	GO:0010008: endosome membrane	1.61E-02
31	GO:0005834: heterotrimeric G-protein complex	1.65E-02
32	GO:0009524: phragmoplast	2.18E-02
33	GO:0005759: mitochondrial matrix	2.47E-02
34	GO:0005768: endosome	2.70E-02
35	GO:0022627: cytosolic small ribosomal subunit	3.23E-02
36	GO:0016020: membrane	3.34E-02
37	GO:0005874: microtubule	4.11E-02
38	GO:0022625: cytosolic large ribosomal subunit	4.36E-02
39	GO:0005773: vacuole	4.79E-02