co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G22790

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0001881: receptor recycling	0.00E+00
2	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
3	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
4	GO:0023052: signaling	0.00E+00
5	GO:0042430: indole-containing compound metabolic process	0.00E+00
6	GO:1903647: negative regulation of chlorophyll catabolic process	0.00E+00
7	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
8	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
9	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
10	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
11	GO:0006511: ubiquitin-dependent protein catabolic process	6.55E-12
12	GO:0051603: proteolysis involved in cellular protein catabolic process	1.36E-06
13	GO:0006099: tricarboxylic acid cycle	9.93E-05
14	GO:0015992: proton transport	1.00E-04
15	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	1.01E-04
16	GO:0043248: proteasome assembly	1.01E-04
17	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.82E-04
18	GO:0022904: respiratory electron transport chain	1.82E-04
19	GO:1901349: glucosinolate transport	2.51E-04
20	GO:0009852: auxin catabolic process	2.51E-04
21	GO:0090449: phloem glucosinolate loading	2.51E-04
22	GO:0042964: thioredoxin reduction	2.51E-04
23	GO:0015798: myo-inositol transport	2.51E-04
24	GO:0009060: aerobic respiration	3.46E-04
25	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	5.53E-04
26	GO:0046939: nucleotide phosphorylation	5.53E-04
27	GO:0009915: phloem sucrose loading	5.53E-04
28	GO:0006212: uracil catabolic process	5.53E-04
29	GO:0051788: response to misfolded protein	5.53E-04
30	GO:0019483: beta-alanine biosynthetic process	5.53E-04
31	GO:0015786: UDP-glucose transport	5.53E-04
32	GO:0043132: NAD transport	5.53E-04
33	GO:0006820: anion transport	6.33E-04
34	GO:0045454: cell redox homeostasis	7.61E-04
35	GO:0055114: oxidation-reduction process	8.88E-04
36	GO:0015783: GDP-fucose transport	8.99E-04
37	GO:0008333: endosome to lysosome transport	8.99E-04
38	GO:0044375: regulation of peroxisome size	8.99E-04
39	GO:0045793: positive regulation of cell size	8.99E-04
40	GO:0006487: protein N-linked glycosylation	1.11E-03
41	GO:0006166: purine ribonucleoside salvage	1.28E-03
42	GO:0072334: UDP-galactose transmembrane transport	1.28E-03
43	GO:0009647: skotomorphogenesis	1.28E-03
44	GO:0015858: nucleoside transport	1.28E-03
45	GO:0006168: adenine salvage	1.28E-03
46	GO:0071786: endoplasmic reticulum tubular network organization	1.28E-03
47	GO:0001676: long-chain fatty acid metabolic process	1.28E-03
48	GO:0032877: positive regulation of DNA endoreduplication	1.28E-03
49	GO:0046836: glycolipid transport	1.28E-03
50	GO:0061077: chaperone-mediated protein folding	1.34E-03
51	GO:0009651: response to salt stress	1.64E-03
52	GO:0051781: positive regulation of cell division	1.71E-03
53	GO:0010363: regulation of plant-type hypersensitive response	1.71E-03
54	GO:0032366: intracellular sterol transport	1.71E-03
55	GO:0042254: ribosome biogenesis	1.95E-03
56	GO:0015991: ATP hydrolysis coupled proton transport	2.02E-03
57	GO:1902183: regulation of shoot apical meristem development	2.19E-03
58	GO:0044209: AMP salvage	2.19E-03
59	GO:0009697: salicylic acid biosynthetic process	2.19E-03
60	GO:0010117: photoprotection	2.19E-03
61	GO:0006564: L-serine biosynthetic process	2.19E-03
62	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.19E-03
63	GO:0046686: response to cadmium ion	2.36E-03
64	GO:0009735: response to cytokinin	2.56E-03
65	GO:0010193: response to ozone	2.68E-03
66	GO:0001731: formation of translation preinitiation complex	2.70E-03
67	GO:0030163: protein catabolic process	3.05E-03
68	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.24E-03
69	GO:0006914: autophagy	3.24E-03
70	GO:0010189: vitamin E biosynthetic process	3.24E-03
71	GO:0009554: megasporogenesis	3.24E-03
72	GO:0032880: regulation of protein localization	3.82E-03
73	GO:0048528: post-embryonic root development	3.82E-03
74	GO:0006744: ubiquinone biosynthetic process	3.82E-03
75	GO:1900056: negative regulation of leaf senescence	3.82E-03
76	GO:0042744: hydrogen peroxide catabolic process	4.15E-03
77	GO:0006102: isocitrate metabolic process	4.44E-03
78	GO:0006644: phospholipid metabolic process	4.44E-03
79	GO:0009642: response to light intensity	4.44E-03
80	GO:0006506: GPI anchor biosynthetic process	4.44E-03
81	GO:0009690: cytokinin metabolic process	4.44E-03
82	GO:0031540: regulation of anthocyanin biosynthetic process	4.44E-03
83	GO:0043562: cellular response to nitrogen levels	5.08E-03
84	GO:0006972: hyperosmotic response	5.08E-03
85	GO:0006412: translation	5.08E-03
86	GO:0019430: removal of superoxide radicals	5.08E-03
87	GO:0015780: nucleotide-sugar transport	5.75E-03
88	GO:0098656: anion transmembrane transport	5.75E-03
89	GO:0046685: response to arsenic-containing substance	5.75E-03
90	GO:0009245: lipid A biosynthetic process	5.75E-03
91	GO:0010206: photosystem II repair	5.75E-03
92	GO:0010043: response to zinc ion	5.83E-03
93	GO:0009853: photorespiration	6.39E-03
94	GO:0006810: transport	6.55E-03
95	GO:0009617: response to bacterium	6.64E-03
96	GO:0000103: sulfate assimilation	7.20E-03
97	GO:0006032: chitin catabolic process	7.20E-03
98	GO:0043069: negative regulation of programmed cell death	7.20E-03
99	GO:0006839: mitochondrial transport	7.28E-03
100	GO:0006631: fatty acid metabolic process	7.59E-03
101	GO:0000272: polysaccharide catabolic process	7.96E-03
102	GO:0008361: regulation of cell size	8.75E-03
103	GO:0006807: nitrogen compound metabolic process	9.57E-03
104	GO:0009266: response to temperature stimulus	1.04E-02
105	GO:0006979: response to oxidative stress	1.04E-02
106	GO:0007034: vacuolar transport	1.04E-02
107	GO:0006446: regulation of translational initiation	1.04E-02
108	GO:0042343: indole glucosinolate metabolic process	1.13E-02
109	GO:0007030: Golgi organization	1.13E-02
110	GO:0034976: response to endoplasmic reticulum stress	1.22E-02
111	GO:0006636: unsaturated fatty acid biosynthetic process	1.22E-02
112	GO:0009116: nucleoside metabolic process	1.31E-02
113	GO:0006406: mRNA export from nucleus	1.31E-02
114	GO:0008299: isoprenoid biosynthetic process	1.41E-02
115	GO:0048511: rhythmic process	1.50E-02
116	GO:0098542: defense response to other organism	1.50E-02
117	GO:0030245: cellulose catabolic process	1.60E-02
118	GO:0016226: iron-sulfur cluster assembly	1.60E-02
119	GO:0035428: hexose transmembrane transport	1.60E-02
120	GO:0010584: pollen exine formation	1.81E-02
121	GO:0006817: phosphate ion transport	1.81E-02
122	GO:0042147: retrograde transport, endosome to Golgi	1.92E-02
123	GO:0010118: stomatal movement	2.02E-02
124	GO:0042631: cellular response to water deprivation	2.02E-02
125	GO:0034220: ion transmembrane transport	2.02E-02
126	GO:0000413: protein peptidyl-prolyl isomerization	2.02E-02
127	GO:0046323: glucose import	2.14E-02
128	GO:0006662: glycerol ether metabolic process	2.14E-02
129	GO:0015986: ATP synthesis coupled proton transport	2.25E-02
130	GO:0006623: protein targeting to vacuole	2.36E-02
131	GO:0048825: cotyledon development	2.36E-02
132	GO:0008654: phospholipid biosynthetic process	2.36E-02
133	GO:0000302: response to reactive oxygen species	2.48E-02
134	GO:0009630: gravitropism	2.60E-02
135	GO:0010252: auxin homeostasis	2.85E-02
136	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.08E-02
137	GO:0000910: cytokinesis	3.10E-02
138	GO:0016049: cell growth	3.76E-02
139	GO:0009817: defense response to fungus, incompatible interaction	3.90E-02
140	GO:0009832: plant-type cell wall biogenesis	4.04E-02
141	GO:0006499: N-terminal protein myristoylation	4.18E-02
142	GO:0006811: ion transport	4.18E-02
143	GO:0000724: double-strand break repair via homologous recombination	4.46E-02
144	GO:0034599: cellular response to oxidative stress	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
2	GO:0003837: beta-ureidopropionase activity	0.00E+00
3	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
4	GO:0044610: FMN transmembrane transporter activity	0.00E+00
5	GO:0003796: lysozyme activity	0.00E+00
6	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
7	GO:0004298: threonine-type endopeptidase activity	2.05E-22
8	GO:0008233: peptidase activity	3.87E-13
9	GO:0004129: cytochrome-c oxidase activity	2.33E-05
10	GO:0004576: oligosaccharyl transferase activity	4.33E-05
11	GO:0004659: prenyltransferase activity	4.33E-05
12	GO:0008177: succinate dehydrogenase (ubiquinone) activity	6.89E-05
13	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	6.89E-05
14	GO:0000104: succinate dehydrogenase activity	6.89E-05
15	GO:0051538: 3 iron, 4 sulfur cluster binding	6.89E-05
16	GO:0005347: ATP transmembrane transporter activity	1.39E-04
17	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.89E-04
18	GO:0015288: porin activity	2.32E-04
19	GO:0016229: steroid dehydrogenase activity	2.51E-04
20	GO:0070401: NADP+ binding	2.51E-04
21	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.51E-04
22	GO:0050200: plasmalogen synthase activity	2.51E-04
23	GO:0019786: Atg8-specific protease activity	2.51E-04
24	GO:0015230: FAD transmembrane transporter activity	2.51E-04
25	GO:0090448: glucosinolate:proton symporter activity	2.51E-04
26	GO:0008308: voltage-gated anion channel activity	2.86E-04
27	GO:0003735: structural constituent of ribosome	4.21E-04
28	GO:0004617: phosphoglycerate dehydrogenase activity	5.53E-04
29	GO:0004047: aminomethyltransferase activity	5.53E-04
30	GO:0051724: NAD transporter activity	5.53E-04
31	GO:0050347: trans-octaprenyltranstransferase activity	5.53E-04
32	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	5.53E-04
33	GO:0019779: Atg8 activating enzyme activity	5.53E-04
34	GO:0005366: myo-inositol:proton symporter activity	5.53E-04
35	GO:0008517: folic acid transporter activity	5.53E-04
36	GO:0015228: coenzyme A transmembrane transporter activity	5.53E-04
37	GO:0008794: arsenate reductase (glutaredoxin) activity	5.54E-04
38	GO:0046961: proton-transporting ATPase activity, rotational mechanism	5.54E-04
39	GO:0005457: GDP-fucose transmembrane transporter activity	8.99E-04
40	GO:0005528: FK506 binding	1.11E-03
41	GO:0009055: electron carrier activity	1.23E-03
42	GO:0017089: glycolipid transporter activity	1.28E-03
43	GO:0019201: nucleotide kinase activity	1.28E-03
44	GO:0003999: adenine phosphoribosyltransferase activity	1.28E-03
45	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.28E-03
46	GO:0005460: UDP-glucose transmembrane transporter activity	1.28E-03
47	GO:0010011: auxin binding	1.71E-03
48	GO:0051861: glycolipid binding	1.71E-03
49	GO:0015369: calcium:proton antiporter activity	1.71E-03
50	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	1.71E-03
51	GO:0050302: indole-3-acetaldehyde oxidase activity	1.71E-03
52	GO:0019776: Atg8 ligase activity	1.71E-03
53	GO:0015368: calcium:cation antiporter activity	1.71E-03
54	GO:0005459: UDP-galactose transmembrane transporter activity	2.19E-03
55	GO:0080122: AMP transmembrane transporter activity	2.19E-03
56	GO:0004791: thioredoxin-disulfide reductase activity	2.34E-03
57	GO:0031177: phosphopantetheine binding	2.70E-03
58	GO:0015035: protein disulfide oxidoreductase activity	2.75E-03
59	GO:0015217: ADP transmembrane transporter activity	3.24E-03
60	GO:0102391: decanoate--CoA ligase activity	3.24E-03
61	GO:0004017: adenylate kinase activity	3.24E-03
62	GO:0000035: acyl binding	3.24E-03
63	GO:0004602: glutathione peroxidase activity	3.24E-03
64	GO:0019843: rRNA binding	3.52E-03
65	GO:0005338: nucleotide-sugar transmembrane transporter activity	3.82E-03
66	GO:0008121: ubiquinol-cytochrome-c reductase activity	3.82E-03
67	GO:0004467: long-chain fatty acid-CoA ligase activity	3.82E-03
68	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	4.44E-03
69	GO:0004033: aldo-keto reductase (NADP) activity	4.44E-03
70	GO:0015491: cation:cation antiporter activity	4.44E-03
71	GO:0004568: chitinase activity	7.20E-03
72	GO:0051539: 4 iron, 4 sulfur cluster binding	7.28E-03
73	GO:0020037: heme binding	7.54E-03
74	GO:0004161: dimethylallyltranstransferase activity	7.96E-03
75	GO:0008559: xenobiotic-transporting ATPase activity	7.96E-03
76	GO:0051537: 2 iron, 2 sulfur cluster binding	8.92E-03
77	GO:0004601: peroxidase activity	9.25E-03
78	GO:0051287: NAD binding	9.99E-03
79	GO:0008134: transcription factor binding	1.31E-02
80	GO:0008810: cellulase activity	1.71E-02
81	GO:0008514: organic anion transmembrane transporter activity	1.81E-02
82	GO:0003756: protein disulfide isomerase activity	1.81E-02
83	GO:0047134: protein-disulfide reductase activity	1.92E-02
84	GO:0005355: glucose transmembrane transporter activity	2.25E-02
85	GO:0004872: receptor activity	2.36E-02
86	GO:0005351: sugar:proton symporter activity	2.69E-02
87	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.72E-02
88	GO:0016597: amino acid binding	3.10E-02
89	GO:0015250: water channel activity	3.23E-02
90	GO:0051213: dioxygenase activity	3.23E-02
91	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.49E-02
92	GO:0030145: manganese ion binding	4.32E-02
93	GO:0050897: cobalt ion binding	4.32E-02
94	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.61E-02
95	GO:0008422: beta-glucosidase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0000502: proteasome complex	5.11E-23
2	GO:0005839: proteasome core complex	2.05E-22
3	GO:0005774: vacuolar membrane	1.38E-11
4	GO:0019773: proteasome core complex, alpha-subunit complex	5.37E-10
5	GO:0005773: vacuole	2.53E-08
6	GO:0005829: cytosol	8.83E-08
7	GO:0045281: succinate dehydrogenase complex	2.91E-06
8	GO:0022626: cytosolic ribosome	3.10E-06
9	GO:0045273: respiratory chain complex II	5.04E-06
10	GO:0046861: glyoxysomal membrane	1.05E-05
11	GO:0005783: endoplasmic reticulum	2.14E-05
12	GO:0005788: endoplasmic reticulum lumen	3.90E-05
13	GO:0008250: oligosaccharyltransferase complex	6.89E-05
14	GO:0000325: plant-type vacuole	7.72E-05
15	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	2.32E-04
16	GO:0000421: autophagosome membrane	2.32E-04
17	GO:0009510: plasmodesmatal desmotubule	2.51E-04
18	GO:0019774: proteasome core complex, beta-subunit complex	2.51E-04
19	GO:0046930: pore complex	2.86E-04
20	GO:0009514: glyoxysome	2.86E-04
21	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	5.53E-04
22	GO:0008541: proteasome regulatory particle, lid subcomplex	5.54E-04
23	GO:0022625: cytosolic large ribosomal subunit	6.05E-04
24	GO:0005750: mitochondrial respiratory chain complex III	8.08E-04
25	GO:0005840: ribosome	9.92E-04
26	GO:0016020: membrane	1.09E-03
27	GO:0070469: respiratory chain	1.22E-03
28	GO:0045271: respiratory chain complex I	1.22E-03
29	GO:0005775: vacuolar lumen	1.28E-03
30	GO:0033180: proton-transporting V-type ATPase, V1 domain	1.28E-03
31	GO:0071782: endoplasmic reticulum tubular network	1.28E-03
32	GO:0005741: mitochondrial outer membrane	1.34E-03
33	GO:0005739: mitochondrion	1.38E-03
34	GO:0031410: cytoplasmic vesicle	1.46E-03
35	GO:0009526: plastid envelope	1.71E-03
36	GO:0005776: autophagosome	1.71E-03
37	GO:0016471: vacuolar proton-transporting V-type ATPase complex	1.71E-03
38	GO:0055035: plastid thylakoid membrane	2.19E-03
39	GO:0005746: mitochondrial respiratory chain	2.19E-03
40	GO:0030904: retromer complex	2.70E-03
41	GO:0016282: eukaryotic 43S preinitiation complex	2.70E-03
42	GO:0005771: multivesicular body	2.70E-03
43	GO:0033290: eukaryotic 48S preinitiation complex	3.24E-03
44	GO:0005777: peroxisome	3.82E-03
45	GO:0005737: cytoplasm	4.22E-03
46	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	4.44E-03
47	GO:0005759: mitochondrial matrix	4.70E-03
48	GO:0005779: integral component of peroxisomal membrane	5.08E-03
49	GO:0005794: Golgi apparatus	5.74E-03
50	GO:0005740: mitochondrial envelope	7.20E-03
51	GO:0022627: cytosolic small ribosomal subunit	7.58E-03
52	GO:0031966: mitochondrial membrane	1.04E-02
53	GO:0005753: mitochondrial proton-transporting ATP synthase complex	1.13E-02
54	GO:0005758: mitochondrial intermembrane space	1.31E-02
55	GO:0005747: mitochondrial respiratory chain complex I	1.36E-02
56	GO:0042651: thylakoid membrane	1.41E-02
57	GO:0015935: small ribosomal subunit	1.50E-02
58	GO:0005886: plasma membrane	1.78E-02
59	GO:0005743: mitochondrial inner membrane	1.82E-02
60	GO:0009507: chloroplast	1.97E-02
61	GO:0009504: cell plate	2.36E-02
62	GO:0009705: plant-type vacuole membrane	2.75E-02
63	GO:0005778: peroxisomal membrane	2.97E-02
64	GO:0005618: cell wall	4.30E-02
65	GO:0015934: large ribosomal subunit	4.32E-02
66	GO:0009536: plastid	4.37E-02
67	GO:0009506: plasmodesma	4.81E-02
68	GO:0005819: spindle	4.90E-02