co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G21540

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1905177: tracheary element differentiation	0.00E+00
2	GO:0033494: ferulate metabolic process	0.00E+00
3	GO:0090627: plant epidermal cell differentiation	0.00E+00
4	GO:0010025: wax biosynthetic process	5.69E-05
5	GO:0009913: epidermal cell differentiation	9.33E-05
6	GO:0009819: drought recovery	2.16E-04
7	GO:0032958: inositol phosphate biosynthetic process	2.39E-04
8	GO:1902265: abscisic acid homeostasis	2.39E-04
9	GO:0042761: very long-chain fatty acid biosynthetic process	3.83E-04
10	GO:0015709: thiosulfate transport	5.29E-04
11	GO:0071422: succinate transmembrane transport	5.29E-04
12	GO:0071712: ER-associated misfolded protein catabolic process	5.29E-04
13	GO:0048569: post-embryonic animal organ development	5.29E-04
14	GO:0032527: protein exit from endoplasmic reticulum	5.29E-04
15	GO:0006898: receptor-mediated endocytosis	5.29E-04
16	GO:0015786: UDP-glucose transport	5.29E-04
17	GO:0010143: cutin biosynthetic process	7.56E-04
18	GO:0006065: UDP-glucuronate biosynthetic process	8.60E-04
19	GO:0015783: GDP-fucose transport	8.60E-04
20	GO:0032940: secretion by cell	8.60E-04
21	GO:0071367: cellular response to brassinosteroid stimulus	8.60E-04
22	GO:0044210: 'de novo' CTP biosynthetic process	8.60E-04
23	GO:0016045: detection of bacterium	8.60E-04
24	GO:0009062: fatty acid catabolic process	8.60E-04
25	GO:0010359: regulation of anion channel activity	8.60E-04
26	GO:0010623: programmed cell death involved in cell development	8.60E-04
27	GO:0006020: inositol metabolic process	1.23E-03
28	GO:1901000: regulation of response to salt stress	1.23E-03
29	GO:0015729: oxaloacetate transport	1.23E-03
30	GO:0072334: UDP-galactose transmembrane transport	1.23E-03
31	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.23E-03
32	GO:0030100: regulation of endocytosis	1.23E-03
33	GO:0010104: regulation of ethylene-activated signaling pathway	1.23E-03
34	GO:1901332: negative regulation of lateral root development	1.23E-03
35	GO:0001944: vasculature development	1.48E-03
36	GO:0009687: abscisic acid metabolic process	1.64E-03
37	GO:0046345: abscisic acid catabolic process	1.64E-03
38	GO:0015689: molybdate ion transport	1.64E-03
39	GO:0051365: cellular response to potassium ion starvation	1.64E-03
40	GO:0022622: root system development	1.64E-03
41	GO:0010508: positive regulation of autophagy	1.64E-03
42	GO:0071585: detoxification of cadmium ion	1.64E-03
43	GO:0042991: transcription factor import into nucleus	1.64E-03
44	GO:0042335: cuticle development	1.89E-03
45	GO:0048497: maintenance of floral organ identity	2.09E-03
46	GO:0006461: protein complex assembly	2.09E-03
47	GO:0071423: malate transmembrane transport	2.09E-03
48	GO:0009823: cytokinin catabolic process	2.09E-03
49	GO:0006656: phosphatidylcholine biosynthetic process	2.09E-03
50	GO:0048825: cotyledon development	2.34E-03
51	GO:0035435: phosphate ion transmembrane transport	2.57E-03
52	GO:0047484: regulation of response to osmotic stress	2.57E-03
53	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	3.09E-03
54	GO:0009955: adaxial/abaxial pattern specification	3.09E-03
55	GO:0071470: cellular response to osmotic stress	3.09E-03
56	GO:0045926: negative regulation of growth	3.09E-03
57	GO:0010103: stomatal complex morphogenesis	3.64E-03
58	GO:0032880: regulation of protein localization	3.64E-03
59	GO:0008272: sulfate transport	3.64E-03
60	GO:0050829: defense response to Gram-negative bacterium	3.64E-03
61	GO:0009704: de-etiolation	4.23E-03
62	GO:2000070: regulation of response to water deprivation	4.23E-03
63	GO:0008610: lipid biosynthetic process	4.23E-03
64	GO:0035265: organ growth	4.23E-03
65	GO:0009690: cytokinin metabolic process	4.23E-03
66	GO:0009827: plant-type cell wall modification	4.84E-03
67	GO:0001558: regulation of cell growth	4.84E-03
68	GO:0045490: pectin catabolic process	4.85E-03
69	GO:0009631: cold acclimation	5.43E-03
70	GO:0006098: pentose-phosphate shunt	5.48E-03
71	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	5.60E-03
72	GO:0009873: ethylene-activated signaling pathway	6.32E-03
73	GO:0006949: syncytium formation	6.85E-03
74	GO:0048765: root hair cell differentiation	7.58E-03
75	GO:0000038: very long-chain fatty acid metabolic process	7.58E-03
76	GO:0052544: defense response by callose deposition in cell wall	7.58E-03
77	GO:0010105: negative regulation of ethylene-activated signaling pathway	8.33E-03
78	GO:0016024: CDP-diacylglycerol biosynthetic process	8.33E-03
79	GO:0045037: protein import into chloroplast stroma	8.33E-03
80	GO:0016567: protein ubiquitination	8.62E-03
81	GO:2000012: regulation of auxin polar transport	9.11E-03
82	GO:0010102: lateral root morphogenesis	9.11E-03
83	GO:0006979: response to oxidative stress	9.21E-03
84	GO:0010540: basipetal auxin transport	9.92E-03
85	GO:0010030: positive regulation of seed germination	1.07E-02
86	GO:0080167: response to karrikin	1.11E-02
87	GO:0009833: plant-type primary cell wall biogenesis	1.16E-02
88	GO:0010200: response to chitin	1.16E-02
89	GO:0043086: negative regulation of catalytic activity	1.23E-02
90	GO:0006289: nucleotide-excision repair	1.25E-02
91	GO:0030150: protein import into mitochondrial matrix	1.25E-02
92	GO:0048367: shoot system development	1.27E-02
93	GO:0051302: regulation of cell division	1.34E-02
94	GO:0007017: microtubule-based process	1.34E-02
95	GO:0051260: protein homooligomerization	1.43E-02
96	GO:0042545: cell wall modification	1.44E-02
97	GO:0009624: response to nematode	1.48E-02
98	GO:0009409: response to cold	1.53E-02
99	GO:0071369: cellular response to ethylene stimulus	1.62E-02
100	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.62E-02
101	GO:0071215: cellular response to abscisic acid stimulus	1.62E-02
102	GO:0010089: xylem development	1.72E-02
103	GO:0006284: base-excision repair	1.72E-02
104	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.82E-02
105	GO:0070417: cellular response to cold	1.82E-02
106	GO:0008284: positive regulation of cell proliferation	1.82E-02
107	GO:0006355: regulation of transcription, DNA-templated	1.88E-02
108	GO:0048364: root development	1.92E-02
109	GO:0042631: cellular response to water deprivation	1.93E-02
110	GO:0000226: microtubule cytoskeleton organization	1.93E-02
111	GO:0009058: biosynthetic process	1.96E-02
112	GO:0010268: brassinosteroid homeostasis	2.03E-02
113	GO:0010154: fruit development	2.03E-02
114	GO:0009958: positive gravitropism	2.03E-02
115	GO:0009749: response to glucose	2.25E-02
116	GO:0006635: fatty acid beta-oxidation	2.36E-02
117	GO:0016132: brassinosteroid biosynthetic process	2.36E-02
118	GO:0000302: response to reactive oxygen species	2.36E-02
119	GO:0006351: transcription, DNA-templated	2.46E-02
120	GO:0010583: response to cyclopentenone	2.47E-02
121	GO:0009828: plant-type cell wall loosening	2.71E-02
122	GO:0006310: DNA recombination	2.71E-02
123	GO:0016125: sterol metabolic process	2.71E-02
124	GO:0019760: glucosinolate metabolic process	2.71E-02
125	GO:0010252: auxin homeostasis	2.71E-02
126	GO:0009639: response to red or far red light	2.71E-02
127	GO:0009739: response to gibberellin	2.87E-02
128	GO:0006470: protein dephosphorylation	2.93E-02
129	GO:0009911: positive regulation of flower development	3.07E-02
130	GO:0010029: regulation of seed germination	3.19E-02
131	GO:0009737: response to abscisic acid	3.29E-02
132	GO:0006974: cellular response to DNA damage stimulus	3.32E-02
133	GO:0009817: defense response to fungus, incompatible interaction	3.71E-02
134	GO:0048767: root hair elongation	3.84E-02
135	GO:0006811: ion transport	3.97E-02
136	GO:0009407: toxin catabolic process	3.97E-02
137	GO:0007568: aging	4.11E-02
138	GO:0048527: lateral root development	4.11E-02
139	GO:0015031: protein transport	4.15E-02
140	GO:0016051: carbohydrate biosynthetic process	4.39E-02
141	GO:0009637: response to blue light	4.39E-02
142	GO:0045087: innate immune response	4.39E-02
143	GO:0048366: leaf development	4.65E-02
144	GO:0006839: mitochondrial transport	4.81E-02
145	GO:0055085: transmembrane transport	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
2	GO:0003883: CTP synthase activity	2.19E-05
3	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	2.39E-04
4	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	2.39E-04
5	GO:0008809: carnitine racemase activity	2.39E-04
6	GO:0000829: inositol heptakisphosphate kinase activity	2.39E-04
7	GO:0004105: choline-phosphate cytidylyltransferase activity	2.39E-04
8	GO:0000828: inositol hexakisphosphate kinase activity	2.39E-04
9	GO:1901677: phosphate transmembrane transporter activity	5.29E-04
10	GO:0017022: myosin binding	5.29E-04
11	GO:0044390: ubiquitin-like protein conjugating enzyme binding	5.29E-04
12	GO:0015117: thiosulfate transmembrane transporter activity	5.29E-04
13	GO:0043565: sequence-specific DNA binding	5.64E-04
14	GO:0005457: GDP-fucose transmembrane transporter activity	8.60E-04
15	GO:0003979: UDP-glucose 6-dehydrogenase activity	8.60E-04
16	GO:0005310: dicarboxylic acid transmembrane transporter activity	8.60E-04
17	GO:0050734: hydroxycinnamoyltransferase activity	8.60E-04
18	GO:0015141: succinate transmembrane transporter activity	8.60E-04
19	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	8.60E-04
20	GO:0017108: 5'-flap endonuclease activity	8.60E-04
21	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.23E-03
22	GO:0015131: oxaloacetate transmembrane transporter activity	1.23E-03
23	GO:0005460: UDP-glucose transmembrane transporter activity	1.23E-03
24	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	1.64E-03
25	GO:0019104: DNA N-glycosylase activity	1.64E-03
26	GO:0015098: molybdate ion transmembrane transporter activity	1.64E-03
27	GO:0010294: abscisic acid glucosyltransferase activity	2.09E-03
28	GO:0005459: UDP-galactose transmembrane transporter activity	2.09E-03
29	GO:0019139: cytokinin dehydrogenase activity	2.09E-03
30	GO:0061630: ubiquitin protein ligase activity	2.56E-03
31	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.57E-03
32	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.57E-03
33	GO:0015140: malate transmembrane transporter activity	3.64E-03
34	GO:0015288: porin activity	4.23E-03
35	GO:0046910: pectinesterase inhibitor activity	4.44E-03
36	GO:0009672: auxin:proton symporter activity	6.15E-03
37	GO:0003700: transcription factor activity, sequence-specific DNA binding	6.54E-03
38	GO:0015020: glucuronosyltransferase activity	6.85E-03
39	GO:0008289: lipid binding	7.07E-03
40	GO:0047372: acylglycerol lipase activity	7.58E-03
41	GO:0015116: sulfate transmembrane transporter activity	8.33E-03
42	GO:0010329: auxin efflux transmembrane transporter activity	9.11E-03
43	GO:0015266: protein channel activity	9.11E-03
44	GO:0004022: alcohol dehydrogenase (NAD) activity	9.11E-03
45	GO:0008083: growth factor activity	9.92E-03
46	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.92E-03
47	GO:0008146: sulfotransferase activity	1.07E-02
48	GO:0045330: aspartyl esterase activity	1.15E-02
49	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.16E-02
50	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.16E-02
51	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.16E-02
52	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.27E-02
53	GO:0016740: transferase activity	1.38E-02
54	GO:0030599: pectinesterase activity	1.39E-02
55	GO:0016746: transferase activity, transferring acyl groups	1.52E-02
56	GO:0030570: pectate lyase activity	1.62E-02
57	GO:0003924: GTPase activity	1.82E-02
58	GO:0005249: voltage-gated potassium channel activity	1.93E-02
59	GO:0003713: transcription coactivator activity	2.03E-02
60	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.39E-02
61	GO:0015297: antiporter activity	2.45E-02
62	GO:0004518: nuclease activity	2.47E-02
63	GO:0003684: damaged DNA binding	2.71E-02
64	GO:0016791: phosphatase activity	2.71E-02
65	GO:0005200: structural constituent of cytoskeleton	2.83E-02
66	GO:0044212: transcription regulatory region DNA binding	2.93E-02
67	GO:0016597: amino acid binding	2.95E-02
68	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.26E-02
69	GO:0008375: acetylglucosaminyltransferase activity	3.32E-02
70	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.58E-02
71	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.71E-02
72	GO:0005096: GTPase activator activity	3.84E-02
73	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.11E-02
74	GO:0003993: acid phosphatase activity	4.53E-02
75	GO:0004842: ubiquitin-protein transferase activity	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0033557: Slx1-Slx4 complex	0.00E+00
3	GO:0030133: transport vesicle	5.29E-04
4	GO:0031357: integral component of chloroplast inner membrane	5.29E-04
5	GO:0008076: voltage-gated potassium channel complex	1.23E-03
6	GO:0036513: Derlin-1 retrotranslocation complex	1.23E-03
7	GO:0009527: plastid outer membrane	1.64E-03
8	GO:0000793: condensed chromosome	2.57E-03
9	GO:0005798: Golgi-associated vesicle	2.57E-03
10	GO:0000794: condensed nuclear chromosome	3.64E-03
11	GO:0031305: integral component of mitochondrial inner membrane	4.23E-03
12	GO:0046930: pore complex	4.84E-03
13	GO:0045298: tubulin complex	5.48E-03
14	GO:0046658: anchored component of plasma membrane	6.93E-03
15	GO:0005769: early endosome	1.16E-02
16	GO:0005618: cell wall	1.51E-02
17	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.72E-02
18	GO:0005886: plasma membrane	1.96E-02
19	GO:0005768: endosome	2.51E-02
20	GO:0071944: cell periphery	2.59E-02
21	GO:0005615: extracellular space	2.87E-02
22	GO:0016021: integral component of membrane	3.45E-02
23	GO:0009707: chloroplast outer membrane	3.71E-02
24	GO:0009505: plant-type cell wall	4.07E-02
25	GO:0005634: nucleus	4.68E-02
26	GO:0005783: endoplasmic reticulum	4.76E-02