co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G21310

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0001881: receptor recycling	0.00E+00
2	GO:0072722: response to amitrole	0.00E+00
3	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
4	GO:0042430: indole-containing compound metabolic process	0.00E+00
5	GO:0055114: oxidation-reduction process	1.37E-07
6	GO:0002237: response to molecule of bacterial origin	6.19E-06
7	GO:0006623: protein targeting to vacuole	4.38E-05
8	GO:0044550: secondary metabolite biosynthetic process	5.94E-05
9	GO:0042744: hydrogen peroxide catabolic process	1.03E-04
10	GO:0006032: chitin catabolic process	1.41E-04
11	GO:0000272: polysaccharide catabolic process	1.65E-04
12	GO:0080183: response to photooxidative stress	2.48E-04
13	GO:0009915: phloem sucrose loading	2.48E-04
14	GO:0051707: response to other organism	2.53E-04
15	GO:0010272: response to silver ion	4.12E-04
16	GO:0008333: endosome to lysosome transport	4.12E-04
17	GO:0048511: rhythmic process	4.23E-04
18	GO:0071456: cellular response to hypoxia	4.63E-04
19	GO:0006096: glycolytic process	4.66E-04
20	GO:0006166: purine ribonucleoside salvage	5.92E-04
21	GO:0006168: adenine salvage	5.92E-04
22	GO:0050832: defense response to fungus	6.67E-04
23	GO:0044209: AMP salvage	9.92E-04
24	GO:0045116: protein neddylation	9.92E-04
25	GO:0006564: L-serine biosynthetic process	9.92E-04
26	GO:0005513: detection of calcium ion	9.92E-04
27	GO:0002238: response to molecule of fungal origin	1.21E-03
28	GO:0042742: defense response to bacterium	1.23E-03
29	GO:0009627: systemic acquired resistance	1.32E-03
30	GO:0009648: photoperiodism	1.45E-03
31	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.45E-03
32	GO:0010189: vitamin E biosynthetic process	1.45E-03
33	GO:1900056: negative regulation of leaf senescence	1.70E-03
34	GO:0050829: defense response to Gram-negative bacterium	1.70E-03
35	GO:0009407: toxin catabolic process	1.70E-03
36	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.70E-03
37	GO:0006102: isocitrate metabolic process	1.97E-03
38	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.97E-03
39	GO:0009642: response to light intensity	1.97E-03
40	GO:0009690: cytokinin metabolic process	1.97E-03
41	GO:0048658: anther wall tapetum development	1.97E-03
42	GO:0010204: defense response signaling pathway, resistance gene-independent	2.24E-03
43	GO:0009060: aerobic respiration	2.53E-03
44	GO:0080144: amino acid homeostasis	2.53E-03
45	GO:0009636: response to toxic substance	2.80E-03
46	GO:0031347: regulation of defense response	3.01E-03
47	GO:0006812: cation transport	3.12E-03
48	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.15E-03
49	GO:0072593: reactive oxygen species metabolic process	3.47E-03
50	GO:0016485: protein processing	3.47E-03
51	GO:0008361: regulation of cell size	3.81E-03
52	GO:0012501: programmed cell death	3.81E-03
53	GO:0002213: defense response to insect	3.81E-03
54	GO:0006829: zinc II ion transport	4.16E-03
55	GO:0006006: glucose metabolic process	4.16E-03
56	GO:0009626: plant-type hypersensitive response	4.21E-03
57	GO:0009266: response to temperature stimulus	4.52E-03
58	GO:0007034: vacuolar transport	4.52E-03
59	GO:0009624: response to nematode	4.75E-03
60	GO:0000162: tryptophan biosynthetic process	5.26E-03
61	GO:0006636: unsaturated fatty acid biosynthetic process	5.26E-03
62	GO:0006979: response to oxidative stress	5.35E-03
63	GO:0009116: nucleoside metabolic process	5.65E-03
64	GO:0006289: nucleotide-excision repair	5.65E-03
65	GO:0016998: cell wall macromolecule catabolic process	6.46E-03
66	GO:0009625: response to insect	7.30E-03
67	GO:0071369: cellular response to ethylene stimulus	7.30E-03
68	GO:0019722: calcium-mediated signaling	7.74E-03
69	GO:0006817: phosphate ion transport	7.74E-03
70	GO:0009735: response to cytokinin	7.96E-03
71	GO:0042147: retrograde transport, endosome to Golgi	8.19E-03
72	GO:0007623: circadian rhythm	8.20E-03
73	GO:0010118: stomatal movement	8.64E-03
74	GO:0042631: cellular response to water deprivation	8.64E-03
75	GO:0080022: primary root development	8.64E-03
76	GO:0071472: cellular response to salt stress	9.10E-03
77	GO:0006885: regulation of pH	9.10E-03
78	GO:0009611: response to wounding	9.16E-03
79	GO:0009749: response to glucose	1.01E-02
80	GO:0000302: response to reactive oxygen species	1.06E-02
81	GO:0016032: viral process	1.11E-02
82	GO:0006914: autophagy	1.21E-02
83	GO:0009615: response to virus	1.37E-02
84	GO:0080167: response to karrikin	1.58E-02
85	GO:0016311: dephosphorylation	1.59E-02
86	GO:0009817: defense response to fungus, incompatible interaction	1.65E-02
87	GO:0007568: aging	1.83E-02
88	GO:0045454: cell redox homeostasis	1.89E-02
89	GO:0006099: tricarboxylic acid cycle	2.02E-02
90	GO:0006869: lipid transport	2.07E-02
91	GO:0042542: response to hydrogen peroxide	2.27E-02
92	GO:0009751: response to salicylic acid	2.30E-02
93	GO:0006855: drug transmembrane transport	2.61E-02
94	GO:0009809: lignin biosynthetic process	2.89E-02
95	GO:0006813: potassium ion transport	2.89E-02
96	GO:0009651: response to salt stress	3.24E-02
97	GO:0009620: response to fungus	3.49E-02
98	GO:0042545: cell wall modification	3.64E-02
99	GO:0046686: response to cadmium ion	3.78E-02

Rank	GO Term	Adjusted P value
1	GO:0016881: acid-amino acid ligase activity	0.00E+00
2	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
3	GO:0003796: lysozyme activity	0.00E+00
4	GO:0020037: heme binding	2.28E-08
5	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	5.08E-06
6	GO:0005506: iron ion binding	4.12E-05
7	GO:0004497: monooxygenase activity	4.94E-05
8	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	8.66E-05
9	GO:0004048: anthranilate phosphoribosyltransferase activity	1.06E-04
10	GO:0019786: Atg8-specific protease activity	1.06E-04
11	GO:0019825: oxygen binding	1.21E-04
12	GO:0004568: chitinase activity	1.41E-04
13	GO:0004618: phosphoglycerate kinase activity	2.48E-04
14	GO:0019781: NEDD8 activating enzyme activity	2.48E-04
15	GO:0004617: phosphoglycerate dehydrogenase activity	2.48E-04
16	GO:0019779: Atg8 activating enzyme activity	2.48E-04
17	GO:0018708: thiol S-methyltransferase activity	2.48E-04
18	GO:0008517: folic acid transporter activity	2.48E-04
19	GO:0004601: peroxidase activity	3.01E-04
20	GO:0051287: NAD binding	3.27E-04
21	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	5.92E-04
22	GO:0004449: isocitrate dehydrogenase (NAD+) activity	5.92E-04
23	GO:0003999: adenine phosphoribosyltransferase activity	5.92E-04
24	GO:0015035: protein disulfide oxidoreductase activity	6.11E-04
25	GO:0004659: prenyltransferase activity	7.86E-04
26	GO:0070628: proteasome binding	7.86E-04
27	GO:0019776: Atg8 ligase activity	7.86E-04
28	GO:0008641: small protein activating enzyme activity	9.92E-04
29	GO:0004040: amidase activity	9.92E-04
30	GO:0005496: steroid binding	9.92E-04
31	GO:0004866: endopeptidase inhibitor activity	1.21E-03
32	GO:0031593: polyubiquitin binding	1.21E-03
33	GO:0004656: procollagen-proline 4-dioxygenase activity	1.45E-03
34	GO:0052747: sinapyl alcohol dehydrogenase activity	1.97E-03
35	GO:0050661: NADP binding	2.21E-03
36	GO:0004364: glutathione transferase activity	2.40E-03
37	GO:0004743: pyruvate kinase activity	2.84E-03
38	GO:0030955: potassium ion binding	2.84E-03
39	GO:0008559: xenobiotic-transporting ATPase activity	3.47E-03
40	GO:0008794: arsenate reductase (glutaredoxin) activity	3.47E-03
41	GO:0004722: protein serine/threonine phosphatase activity	3.71E-03
42	GO:0045551: cinnamyl-alcohol dehydrogenase activity	3.81E-03
43	GO:0004022: alcohol dehydrogenase (NAD) activity	4.16E-03
44	GO:0008131: primary amine oxidase activity	4.52E-03
45	GO:0009055: electron carrier activity	4.70E-03
46	GO:0008061: chitin binding	4.88E-03
47	GO:0004725: protein tyrosine phosphatase activity	5.26E-03
48	GO:0031418: L-ascorbic acid binding	5.65E-03
49	GO:0043130: ubiquitin binding	5.65E-03
50	GO:0008134: transcription factor binding	5.65E-03
51	GO:0008324: cation transmembrane transporter activity	6.05E-03
52	GO:0004499: N,N-dimethylaniline monooxygenase activity	7.74E-03
53	GO:0005451: monovalent cation:proton antiporter activity	8.64E-03
54	GO:0005199: structural constituent of cell wall	9.10E-03
55	GO:0046873: metal ion transmembrane transporter activity	9.10E-03
56	GO:0001085: RNA polymerase II transcription factor binding	9.10E-03
57	GO:0015299: solute:proton antiporter activity	9.58E-03
58	GO:0048038: quinone binding	1.06E-02
59	GO:0015385: sodium:proton antiporter activity	1.16E-02
60	GO:0003684: damaged DNA binding	1.21E-02
61	GO:0016791: phosphatase activity	1.21E-02
62	GO:0000287: magnesium ion binding	1.25E-02
63	GO:0008483: transaminase activity	1.26E-02
64	GO:0016597: amino acid binding	1.31E-02
65	GO:0050660: flavin adenine dinucleotide binding	1.47E-02
66	GO:0004721: phosphoprotein phosphatase activity	1.54E-02
67	GO:0004222: metalloendopeptidase activity	1.77E-02
68	GO:0030145: manganese ion binding	1.83E-02
69	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.83E-02
70	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.83E-02
71	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.95E-02
72	GO:0008422: beta-glucosidase activity	2.08E-02
73	GO:0051537: 2 iron, 2 sulfur cluster binding	2.47E-02
74	GO:0045330: aspartyl esterase activity	3.11E-02
75	GO:0008289: lipid binding	3.24E-02
76	GO:0045735: nutrient reservoir activity	3.26E-02
77	GO:0030599: pectinesterase activity	3.56E-02
78	GO:0004252: serine-type endopeptidase activity	4.70E-02
79	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0005775: vacuolar lumen	5.92E-04
2	GO:0005794: Golgi apparatus	7.20E-04
3	GO:0005776: autophagosome	7.86E-04
4	GO:0016021: integral component of membrane	9.05E-04
5	GO:0005771: multivesicular body	1.21E-03
6	GO:0030904: retromer complex	1.21E-03
7	GO:0000325: plant-type vacuole	1.78E-03
8	GO:0000421: autophagosome membrane	1.97E-03
9	GO:0031090: organelle membrane	2.53E-03
10	GO:0005886: plasma membrane	2.83E-03
11	GO:0017119: Golgi transport complex	3.15E-03
12	GO:0016020: membrane	3.40E-03
13	GO:0005618: cell wall	4.20E-03
14	GO:0005750: mitochondrial respiratory chain complex III	4.52E-03
15	GO:0005758: mitochondrial intermembrane space	5.65E-03
16	GO:0005576: extracellular region	5.86E-03
17	GO:0005741: mitochondrial outer membrane	6.46E-03
18	GO:0031410: cytoplasmic vesicle	6.87E-03
19	GO:0009505: plant-type cell wall	7.45E-03
20	GO:0005770: late endosome	9.10E-03
21	GO:0005774: vacuolar membrane	1.08E-02
22	GO:0071944: cell periphery	1.16E-02
23	GO:0005667: transcription factor complex	1.48E-02
24	GO:0031969: chloroplast membrane	1.58E-02
25	GO:0005802: trans-Golgi network	1.62E-02
26	GO:0009707: chloroplast outer membrane	1.65E-02
27	GO:0005768: endosome	1.91E-02
28	GO:0031902: late endosome membrane	2.21E-02
29	GO:0031966: mitochondrial membrane	2.75E-02
30	GO:0009536: plastid	2.81E-02
31	GO:0000502: proteasome complex	2.89E-02
32	GO:0009570: chloroplast stroma	3.18E-02
33	GO:0005783: endoplasmic reticulum	3.53E-02
34	GO:0009506: plasmodesma	4.18E-02
35	GO:0009543: chloroplast thylakoid lumen	4.36E-02
36	GO:0005829: cytosol	4.39E-02