co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G20650

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042493: response to drug	0.00E+00
2	GO:0061157: mRNA destabilization	0.00E+00
3	GO:0006949: syncytium formation	2.09E-04
4	GO:0006741: NADP biosynthetic process	3.20E-04
5	GO:0080181: lateral root branching	3.20E-04
6	GO:2000012: regulation of auxin polar transport	3.21E-04
7	GO:0005992: trehalose biosynthetic process	5.03E-04
8	GO:0005977: glycogen metabolic process	5.26E-04
9	GO:0019674: NAD metabolic process	5.26E-04
10	GO:0009664: plant-type cell wall organization	5.53E-04
11	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	7.22E-04
12	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	7.53E-04
13	GO:0009650: UV protection	7.53E-04
14	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	7.53E-04
15	GO:0019363: pyridine nucleotide biosynthetic process	7.53E-04
16	GO:0022622: root system development	9.98E-04
17	GO:0010021: amylopectin biosynthetic process	9.98E-04
18	GO:0010158: abaxial cell fate specification	1.26E-03
19	GO:0006656: phosphatidylcholine biosynthetic process	1.26E-03
20	GO:0016558: protein import into peroxisome matrix	1.26E-03
21	GO:0005975: carbohydrate metabolic process	1.34E-03
22	GO:0009828: plant-type cell wall loosening	1.44E-03
23	GO:0000741: karyogamy	1.55E-03
24	GO:0040008: regulation of growth	1.75E-03
25	GO:0010189: vitamin E biosynthetic process	1.86E-03
26	GO:0009451: RNA modification	1.91E-03
27	GO:0010050: vegetative phase change	2.18E-03
28	GO:1900057: positive regulation of leaf senescence	2.18E-03
29	GO:0010103: stomatal complex morphogenesis	2.18E-03
30	GO:0032880: regulation of protein localization	2.18E-03
31	GO:0070413: trehalose metabolism in response to stress	2.52E-03
32	GO:0009850: auxin metabolic process	2.52E-03
33	GO:0006605: protein targeting	2.52E-03
34	GO:0010492: maintenance of shoot apical meristem identity	2.52E-03
35	GO:0009827: plant-type cell wall modification	2.88E-03
36	GO:0009826: unidimensional cell growth	3.07E-03
37	GO:0009416: response to light stimulus	3.21E-03
38	GO:0006098: pentose-phosphate shunt	3.26E-03
39	GO:0048507: meristem development	3.26E-03
40	GO:0009773: photosynthetic electron transport in photosystem I	4.48E-03
41	GO:0009750: response to fructose	4.48E-03
42	GO:0055114: oxidation-reduction process	4.67E-03
43	GO:0010582: floral meristem determinacy	4.92E-03
44	GO:0010628: positive regulation of gene expression	5.37E-03
45	GO:0006094: gluconeogenesis	5.37E-03
46	GO:0019853: L-ascorbic acid biosynthetic process	6.32E-03
47	GO:0010030: positive regulation of seed germination	6.32E-03
48	GO:0009740: gibberellic acid mediated signaling pathway	6.49E-03
49	GO:0009553: embryo sac development	6.69E-03
50	GO:0006863: purine nucleobase transport	6.81E-03
51	GO:0006833: water transport	6.81E-03
52	GO:0009742: brassinosteroid mediated signaling pathway	7.31E-03
53	GO:0080147: root hair cell development	7.32E-03
54	GO:0007017: microtubule-based process	7.84E-03
55	GO:0048511: rhythmic process	8.38E-03
56	GO:0009411: response to UV	9.48E-03
57	GO:0006012: galactose metabolic process	9.48E-03
58	GO:0006284: base-excision repair	1.01E-02
59	GO:0009306: protein secretion	1.01E-02
60	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.06E-02
61	GO:0008284: positive regulation of cell proliferation	1.06E-02
62	GO:0009734: auxin-activated signaling pathway	1.07E-02
63	GO:0042631: cellular response to water deprivation	1.12E-02
64	GO:0009733: response to auxin	1.12E-02
65	GO:0034220: ion transmembrane transport	1.12E-02
66	GO:0009958: positive gravitropism	1.18E-02
67	GO:0010197: polar nucleus fusion	1.18E-02
68	GO:0048868: pollen tube development	1.18E-02
69	GO:0046323: glucose import	1.18E-02
70	GO:0009741: response to brassinosteroid	1.18E-02
71	GO:0007018: microtubule-based movement	1.25E-02
72	GO:0006814: sodium ion transport	1.25E-02
73	GO:0042752: regulation of circadian rhythm	1.25E-02
74	GO:0009749: response to glucose	1.31E-02
75	GO:0019252: starch biosynthetic process	1.31E-02
76	GO:0008654: phospholipid biosynthetic process	1.31E-02
77	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.37E-02
78	GO:0010193: response to ozone	1.37E-02
79	GO:0006635: fatty acid beta-oxidation	1.37E-02
80	GO:0016032: viral process	1.44E-02
81	GO:0032502: developmental process	1.44E-02
82	GO:0006810: transport	1.67E-02
83	GO:0001666: response to hypoxia	1.79E-02
84	GO:0010027: thylakoid membrane organization	1.79E-02
85	GO:0010411: xyloglucan metabolic process	2.00E-02
86	GO:0009817: defense response to fungus, incompatible interaction	2.16E-02
87	GO:0048481: plant ovule development	2.16E-02
88	GO:0080167: response to karrikin	2.30E-02
89	GO:0006811: ion transport	2.31E-02
90	GO:0048527: lateral root development	2.39E-02
91	GO:0044550: secondary metabolite biosynthetic process	2.50E-02
92	GO:0009640: photomorphogenesis	3.06E-02
93	GO:0009744: response to sucrose	3.06E-02
94	GO:0042546: cell wall biogenesis	3.14E-02
95	GO:0009793: embryo development ending in seed dormancy	3.27E-02
96	GO:0006281: DNA repair	3.39E-02
97	GO:0010224: response to UV-B	3.87E-02
98	GO:0006096: glycolytic process	4.26E-02
99	GO:0006396: RNA processing	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
2	GO:0042623: ATPase activity, coupled	0.00E+00
3	GO:0010276: phytol kinase activity	0.00E+00
4	GO:0042736: NADH kinase activity	1.40E-04
5	GO:0004805: trehalose-phosphatase activity	2.09E-04
6	GO:0016491: oxidoreductase activity	2.47E-04
7	GO:0019156: isoamylase activity	3.20E-04
8	GO:0000234: phosphoethanolamine N-methyltransferase activity	3.20E-04
9	GO:0005354: galactose transmembrane transporter activity	7.53E-04
10	GO:0008508: bile acid:sodium symporter activity	7.53E-04
11	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	9.98E-04
12	GO:0008725: DNA-3-methyladenine glycosylase activity	1.26E-03
13	GO:0004332: fructose-bisphosphate aldolase activity	1.55E-03
14	GO:0000293: ferric-chelate reductase activity	1.55E-03
15	GO:0042578: phosphoric ester hydrolase activity	1.55E-03
16	GO:0004556: alpha-amylase activity	1.55E-03
17	GO:0004462: lactoylglutathione lyase activity	1.55E-03
18	GO:0004605: phosphatidate cytidylyltransferase activity	1.55E-03
19	GO:0004033: aldo-keto reductase (NADP) activity	2.52E-03
20	GO:0003951: NAD+ kinase activity	2.88E-03
21	GO:0015020: glucuronosyltransferase activity	4.06E-03
22	GO:0005089: Rho guanyl-nucleotide exchange factor activity	4.48E-03
23	GO:0008081: phosphoric diester hydrolase activity	5.37E-03
24	GO:0004871: signal transducer activity	5.64E-03
25	GO:0008083: growth factor activity	5.84E-03
26	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.84E-03
27	GO:0004519: endonuclease activity	7.71E-03
28	GO:0005345: purine nucleobase transmembrane transporter activity	7.84E-03
29	GO:0016829: lyase activity	9.35E-03
30	GO:0003727: single-stranded RNA binding	1.01E-02
31	GO:0005355: glucose transmembrane transporter activity	1.25E-02
32	GO:0008194: UDP-glycosyltransferase activity	1.34E-02
33	GO:0048038: quinone binding	1.37E-02
34	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.37E-02
35	GO:0016791: phosphatase activity	1.58E-02
36	GO:0008483: transaminase activity	1.64E-02
37	GO:0015250: water channel activity	1.79E-02
38	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.00E-02
39	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.08E-02
40	GO:0008236: serine-type peptidase activity	2.08E-02
41	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.16E-02
42	GO:0005096: GTPase activator activity	2.23E-02
43	GO:0004364: glutathione transferase activity	2.97E-02
44	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.97E-02
45	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.41E-02
46	GO:0005506: iron ion binding	3.41E-02
47	GO:0003777: microtubule motor activity	4.06E-02
48	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.55E-02
49	GO:0004650: polygalacturonase activity	4.55E-02
50	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.55E-02
51	GO:0016874: ligase activity	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009531: secondary cell wall	7.53E-04
3	GO:0030286: dynein complex	9.98E-04
4	GO:0009543: chloroplast thylakoid lumen	1.24E-03
5	GO:0009507: chloroplast	2.41E-03
6	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.26E-03
7	GO:0008180: COP9 signalosome	3.26E-03
8	GO:0090404: pollen tube tip	4.48E-03
9	GO:0030095: chloroplast photosystem II	5.84E-03
10	GO:0009654: photosystem II oxygen evolving complex	7.84E-03
11	GO:0043231: intracellular membrane-bounded organelle	7.85E-03
12	GO:0005871: kinesin complex	1.06E-02
13	GO:0016020: membrane	1.18E-02
14	GO:0019898: extrinsic component of membrane	1.31E-02
15	GO:0005778: peroxisomal membrane	1.64E-02
16	GO:0019005: SCF ubiquitin ligase complex	2.16E-02
17	GO:0031225: anchored component of membrane	2.52E-02
18	GO:0005886: plasma membrane	2.87E-02
19	GO:0009535: chloroplast thylakoid membrane	3.12E-02
20	GO:0000502: proteasome complex	3.78E-02