GO Enrichment Analysis of Co-expressed Genes with
AT1G20540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901965: endoplasmic reticulum to chloroplast transport | 0.00E+00 |
| 2 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
| 3 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 4 | GO:0006655: phosphatidylglycerol biosynthetic process | 6.25E-06 |
| 5 | GO:1904966: positive regulation of vitamin E biosynthetic process | 4.60E-05 |
| 6 | GO:1990052: ER to chloroplast lipid transport | 4.60E-05 |
| 7 | GO:1904964: positive regulation of phytol biosynthetic process | 4.60E-05 |
| 8 | GO:0006436: tryptophanyl-tRNA aminoacylation | 4.60E-05 |
| 9 | GO:0019646: aerobic electron transport chain | 4.60E-05 |
| 10 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.65E-05 |
| 11 | GO:0080005: photosystem stoichiometry adjustment | 1.13E-04 |
| 12 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.13E-04 |
| 13 | GO:0034755: iron ion transmembrane transport | 1.13E-04 |
| 14 | GO:0071457: cellular response to ozone | 1.13E-04 |
| 15 | GO:0051604: protein maturation | 1.95E-04 |
| 16 | GO:0006013: mannose metabolic process | 1.95E-04 |
| 17 | GO:0002230: positive regulation of defense response to virus by host | 1.95E-04 |
| 18 | GO:1901672: positive regulation of systemic acquired resistance | 1.95E-04 |
| 19 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.85E-04 |
| 20 | GO:0071484: cellular response to light intensity | 2.85E-04 |
| 21 | GO:0007264: small GTPase mediated signal transduction | 3.07E-04 |
| 22 | GO:0006021: inositol biosynthetic process | 3.84E-04 |
| 23 | GO:0071486: cellular response to high light intensity | 3.84E-04 |
| 24 | GO:0031935: regulation of chromatin silencing | 3.84E-04 |
| 25 | GO:0009816: defense response to bacterium, incompatible interaction | 4.38E-04 |
| 26 | GO:0006282: regulation of DNA repair | 4.88E-04 |
| 27 | GO:0071493: cellular response to UV-B | 4.88E-04 |
| 28 | GO:0034052: positive regulation of plant-type hypersensitive response | 4.88E-04 |
| 29 | GO:0046855: inositol phosphate dephosphorylation | 5.98E-04 |
| 30 | GO:0042372: phylloquinone biosynthetic process | 7.13E-04 |
| 31 | GO:1900056: negative regulation of leaf senescence | 8.33E-04 |
| 32 | GO:0048564: photosystem I assembly | 9.57E-04 |
| 33 | GO:0019430: removal of superoxide radicals | 1.09E-03 |
| 34 | GO:0071482: cellular response to light stimulus | 1.09E-03 |
| 35 | GO:0009657: plastid organization | 1.09E-03 |
| 36 | GO:1900426: positive regulation of defense response to bacterium | 1.36E-03 |
| 37 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.36E-03 |
| 38 | GO:0045036: protein targeting to chloroplast | 1.51E-03 |
| 39 | GO:0006879: cellular iron ion homeostasis | 1.66E-03 |
| 40 | GO:0006790: sulfur compound metabolic process | 1.81E-03 |
| 41 | GO:0019853: L-ascorbic acid biosynthetic process | 2.31E-03 |
| 42 | GO:0046854: phosphatidylinositol phosphorylation | 2.31E-03 |
| 43 | GO:0006418: tRNA aminoacylation for protein translation | 2.85E-03 |
| 44 | GO:0003333: amino acid transmembrane transport | 3.04E-03 |
| 45 | GO:0040007: growth | 3.43E-03 |
| 46 | GO:0071472: cellular response to salt stress | 4.25E-03 |
| 47 | GO:0008654: phospholipid biosynthetic process | 4.68E-03 |
| 48 | GO:0009791: post-embryonic development | 4.68E-03 |
| 49 | GO:0031047: gene silencing by RNA | 5.13E-03 |
| 50 | GO:0051607: defense response to virus | 6.08E-03 |
| 51 | GO:0010027: thylakoid membrane organization | 6.32E-03 |
| 52 | GO:0048481: plant ovule development | 7.60E-03 |
| 53 | GO:0018298: protein-chromophore linkage | 7.60E-03 |
| 54 | GO:0006281: DNA repair | 7.68E-03 |
| 55 | GO:0007568: aging | 8.41E-03 |
| 56 | GO:0009910: negative regulation of flower development | 8.41E-03 |
| 57 | GO:0010114: response to red light | 1.07E-02 |
| 58 | GO:0010224: response to UV-B | 1.35E-02 |
| 59 | GO:0006417: regulation of translation | 1.42E-02 |
| 60 | GO:0035556: intracellular signal transduction | 1.44E-02 |
| 61 | GO:0009626: plant-type hypersensitive response | 1.56E-02 |
| 62 | GO:0016569: covalent chromatin modification | 1.63E-02 |
| 63 | GO:0006396: RNA processing | 1.73E-02 |
| 64 | GO:0055085: transmembrane transport | 1.74E-02 |
| 65 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.86E-02 |
| 66 | GO:0006413: translational initiation | 2.38E-02 |
| 67 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.59E-02 |
| 68 | GO:0006979: response to oxidative stress | 2.80E-02 |
| 69 | GO:0010468: regulation of gene expression | 2.84E-02 |
| 70 | GO:0009658: chloroplast organization | 3.42E-02 |
| 71 | GO:0006970: response to osmotic stress | 3.60E-02 |
| 72 | GO:0080167: response to karrikin | 3.98E-02 |
| 73 | GO:0046777: protein autophosphorylation | 4.18E-02 |
| 74 | GO:0046686: response to cadmium ion | 4.31E-02 |
| 75 | GO:0015979: photosynthesis | 4.37E-02 |
| 76 | GO:0045454: cell redox homeostasis | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004830: tryptophan-tRNA ligase activity | 4.60E-05 |
| 2 | GO:0030941: chloroplast targeting sequence binding | 4.60E-05 |
| 3 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 4.60E-05 |
| 4 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.13E-04 |
| 5 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.13E-04 |
| 6 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.13E-04 |
| 7 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 1.95E-04 |
| 8 | GO:0004751: ribose-5-phosphate isomerase activity | 1.95E-04 |
| 9 | GO:0004096: catalase activity | 1.95E-04 |
| 10 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.95E-04 |
| 11 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 3.84E-04 |
| 12 | GO:0005319: lipid transporter activity | 3.84E-04 |
| 13 | GO:0051861: glycolipid binding | 3.84E-04 |
| 14 | GO:0043495: protein anchor | 3.84E-04 |
| 15 | GO:0004605: phosphatidate cytidylyltransferase activity | 5.98E-04 |
| 16 | GO:0004784: superoxide dismutase activity | 5.98E-04 |
| 17 | GO:0004559: alpha-mannosidase activity | 7.13E-04 |
| 18 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 7.13E-04 |
| 19 | GO:0019899: enzyme binding | 8.33E-04 |
| 20 | GO:0031625: ubiquitin protein ligase binding | 1.26E-03 |
| 21 | GO:0005381: iron ion transmembrane transporter activity | 1.36E-03 |
| 22 | GO:0015174: basic amino acid transmembrane transporter activity | 1.36E-03 |
| 23 | GO:0003954: NADH dehydrogenase activity | 2.67E-03 |
| 24 | GO:0005528: FK506 binding | 2.67E-03 |
| 25 | GO:0004176: ATP-dependent peptidase activity | 3.04E-03 |
| 26 | GO:0022891: substrate-specific transmembrane transporter activity | 3.43E-03 |
| 27 | GO:0003727: single-stranded RNA binding | 3.63E-03 |
| 28 | GO:0004812: aminoacyl-tRNA ligase activity | 3.83E-03 |
| 29 | GO:0004402: histone acetyltransferase activity | 4.04E-03 |
| 30 | GO:0008080: N-acetyltransferase activity | 4.25E-03 |
| 31 | GO:0019901: protein kinase binding | 4.68E-03 |
| 32 | GO:0005515: protein binding | 4.87E-03 |
| 33 | GO:0008233: peptidase activity | 5.12E-03 |
| 34 | GO:0061630: ubiquitin protein ligase activity | 5.48E-03 |
| 35 | GO:0016168: chlorophyll binding | 6.57E-03 |
| 36 | GO:0008236: serine-type peptidase activity | 7.34E-03 |
| 37 | GO:0003924: GTPase activity | 7.68E-03 |
| 38 | GO:0050897: cobalt ion binding | 8.41E-03 |
| 39 | GO:0043621: protein self-association | 1.13E-02 |
| 40 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.19E-02 |
| 41 | GO:0005524: ATP binding | 1.32E-02 |
| 42 | GO:0015171: amino acid transmembrane transporter activity | 1.42E-02 |
| 43 | GO:0016746: transferase activity, transferring acyl groups | 1.73E-02 |
| 44 | GO:0005507: copper ion binding | 1.95E-02 |
| 45 | GO:0005525: GTP binding | 2.25E-02 |
| 46 | GO:0003743: translation initiation factor activity | 2.80E-02 |
| 47 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.97E-02 |
| 48 | GO:0042802: identical protein binding | 2.97E-02 |
| 49 | GO:0003824: catalytic activity | 3.04E-02 |
| 50 | GO:0016788: hydrolase activity, acting on ester bonds | 3.46E-02 |
| 51 | GO:0016491: oxidoreductase activity | 3.65E-02 |
| 52 | GO:0050660: flavin adenine dinucleotide binding | 3.79E-02 |
| 53 | GO:0004842: ubiquitin-protein transferase activity | 3.83E-02 |
| 54 | GO:0052689: carboxylic ester hydrolase activity | 4.27E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 4.86E-12 |
| 2 | GO:0031969: chloroplast membrane | 3.32E-06 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.60E-05 |
| 4 | GO:0031304: intrinsic component of mitochondrial inner membrane | 1.13E-04 |
| 5 | GO:0009941: chloroplast envelope | 1.31E-04 |
| 6 | GO:0009526: plastid envelope | 3.84E-04 |
| 7 | GO:0055035: plastid thylakoid membrane | 4.88E-04 |
| 8 | GO:0031359: integral component of chloroplast outer membrane | 8.33E-04 |
| 9 | GO:0009508: plastid chromosome | 1.98E-03 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 2.00E-03 |
| 11 | GO:0009534: chloroplast thylakoid | 2.77E-03 |
| 12 | GO:0042651: thylakoid membrane | 2.85E-03 |
| 13 | GO:0009523: photosystem II | 4.68E-03 |
| 14 | GO:0009295: nucleoid | 5.84E-03 |
| 15 | GO:0009707: chloroplast outer membrane | 7.60E-03 |
| 16 | GO:0031977: thylakoid lumen | 1.01E-02 |
| 17 | GO:0031966: mitochondrial membrane | 1.26E-02 |
| 18 | GO:0005635: nuclear envelope | 1.39E-02 |
| 19 | GO:0005747: mitochondrial respiratory chain complex I | 1.52E-02 |
| 20 | GO:0010287: plastoglobule | 1.92E-02 |
| 21 | GO:0005623: cell | 2.03E-02 |
| 22 | GO:0009524: phragmoplast | 2.07E-02 |
| 23 | GO:0005759: mitochondrial matrix | 2.34E-02 |
| 24 | GO:0005768: endosome | 2.50E-02 |
| 25 | GO:0009536: plastid | 3.40E-02 |
| 26 | GO:0009505: plant-type cell wall | 3.47E-02 |
| 27 | GO:0005743: mitochondrial inner membrane | 4.98E-02 |