GO Enrichment Analysis of Co-expressed Genes with
AT1G18730
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 3 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:0006412: translation | 4.10E-17 |
| 5 | GO:0032544: plastid translation | 1.34E-13 |
| 6 | GO:0042254: ribosome biogenesis | 4.55E-13 |
| 7 | GO:0009735: response to cytokinin | 7.43E-12 |
| 8 | GO:0015979: photosynthesis | 7.84E-11 |
| 9 | GO:0019464: glycine decarboxylation via glycine cleavage system | 5.05E-08 |
| 10 | GO:0009773: photosynthetic electron transport in photosystem I | 5.09E-06 |
| 11 | GO:0009409: response to cold | 3.84E-05 |
| 12 | GO:0009658: chloroplast organization | 5.87E-05 |
| 13 | GO:0010196: nonphotochemical quenching | 6.70E-05 |
| 14 | GO:0043489: RNA stabilization | 1.31E-04 |
| 15 | GO:0000023: maltose metabolic process | 1.31E-04 |
| 16 | GO:0010027: thylakoid membrane organization | 1.32E-04 |
| 17 | GO:0010206: photosystem II repair | 1.34E-04 |
| 18 | GO:0009817: defense response to fungus, incompatible interaction | 1.92E-04 |
| 19 | GO:0009629: response to gravity | 3.03E-04 |
| 20 | GO:0019388: galactose catabolic process | 3.03E-04 |
| 21 | GO:0007154: cell communication | 3.03E-04 |
| 22 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 3.03E-04 |
| 23 | GO:0010270: photosystem II oxygen evolving complex assembly | 3.03E-04 |
| 24 | GO:0006518: peptide metabolic process | 4.99E-04 |
| 25 | GO:0090153: regulation of sphingolipid biosynthetic process | 4.99E-04 |
| 26 | GO:0006000: fructose metabolic process | 4.99E-04 |
| 27 | GO:0010731: protein glutathionylation | 7.14E-04 |
| 28 | GO:0009590: detection of gravity | 7.14E-04 |
| 29 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 7.14E-04 |
| 30 | GO:0006241: CTP biosynthetic process | 7.14E-04 |
| 31 | GO:0006165: nucleoside diphosphate phosphorylation | 7.14E-04 |
| 32 | GO:0006228: UTP biosynthetic process | 7.14E-04 |
| 33 | GO:2000122: negative regulation of stomatal complex development | 9.47E-04 |
| 34 | GO:0006546: glycine catabolic process | 9.47E-04 |
| 35 | GO:0010021: amylopectin biosynthetic process | 9.47E-04 |
| 36 | GO:0010037: response to carbon dioxide | 9.47E-04 |
| 37 | GO:0006808: regulation of nitrogen utilization | 9.47E-04 |
| 38 | GO:0015976: carbon utilization | 9.47E-04 |
| 39 | GO:0006109: regulation of carbohydrate metabolic process | 9.47E-04 |
| 40 | GO:0006183: GTP biosynthetic process | 9.47E-04 |
| 41 | GO:0045727: positive regulation of translation | 9.47E-04 |
| 42 | GO:0019252: starch biosynthetic process | 1.04E-03 |
| 43 | GO:0006461: protein complex assembly | 1.20E-03 |
| 44 | GO:0006544: glycine metabolic process | 1.20E-03 |
| 45 | GO:0006563: L-serine metabolic process | 1.47E-03 |
| 46 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.47E-03 |
| 47 | GO:0000470: maturation of LSU-rRNA | 1.47E-03 |
| 48 | GO:0006828: manganese ion transport | 1.47E-03 |
| 49 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.76E-03 |
| 50 | GO:0009955: adaxial/abaxial pattern specification | 1.76E-03 |
| 51 | GO:1901259: chloroplast rRNA processing | 1.76E-03 |
| 52 | GO:0015995: chlorophyll biosynthetic process | 1.85E-03 |
| 53 | GO:0005978: glycogen biosynthetic process | 2.39E-03 |
| 54 | GO:0009853: photorespiration | 2.59E-03 |
| 55 | GO:0034599: cellular response to oxidative stress | 2.70E-03 |
| 56 | GO:0006002: fructose 6-phosphate metabolic process | 2.73E-03 |
| 57 | GO:0009657: plastid organization | 2.73E-03 |
| 58 | GO:0006783: heme biosynthetic process | 3.08E-03 |
| 59 | GO:0035999: tetrahydrofolate interconversion | 3.46E-03 |
| 60 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.84E-03 |
| 61 | GO:0043085: positive regulation of catalytic activity | 4.24E-03 |
| 62 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.24E-03 |
| 63 | GO:0006816: calcium ion transport | 4.24E-03 |
| 64 | GO:0006415: translational termination | 4.24E-03 |
| 65 | GO:0005983: starch catabolic process | 4.65E-03 |
| 66 | GO:0006006: glucose metabolic process | 5.08E-03 |
| 67 | GO:0006094: gluconeogenesis | 5.08E-03 |
| 68 | GO:0009767: photosynthetic electron transport chain | 5.08E-03 |
| 69 | GO:0005986: sucrose biosynthetic process | 5.08E-03 |
| 70 | GO:0010102: lateral root morphogenesis | 5.08E-03 |
| 71 | GO:0010020: chloroplast fission | 5.52E-03 |
| 72 | GO:0019253: reductive pentose-phosphate cycle | 5.52E-03 |
| 73 | GO:0005985: sucrose metabolic process | 5.97E-03 |
| 74 | GO:0006289: nucleotide-excision repair | 6.91E-03 |
| 75 | GO:0000027: ribosomal large subunit assembly | 6.91E-03 |
| 76 | GO:0006418: tRNA aminoacylation for protein translation | 7.40E-03 |
| 77 | GO:0016114: terpenoid biosynthetic process | 7.91E-03 |
| 78 | GO:0055114: oxidation-reduction process | 8.24E-03 |
| 79 | GO:0042742: defense response to bacterium | 8.26E-03 |
| 80 | GO:0009411: response to UV | 8.95E-03 |
| 81 | GO:0009790: embryo development | 9.28E-03 |
| 82 | GO:0007623: circadian rhythm | 1.10E-02 |
| 83 | GO:0006662: glycerol ether metabolic process | 1.12E-02 |
| 84 | GO:0048868: pollen tube development | 1.12E-02 |
| 85 | GO:0000302: response to reactive oxygen species | 1.30E-02 |
| 86 | GO:0030163: protein catabolic process | 1.42E-02 |
| 87 | GO:0006508: proteolysis | 1.46E-02 |
| 88 | GO:0046686: response to cadmium ion | 1.61E-02 |
| 89 | GO:0048481: plant ovule development | 2.03E-02 |
| 90 | GO:0080167: response to karrikin | 2.12E-02 |
| 91 | GO:0010119: regulation of stomatal movement | 2.25E-02 |
| 92 | GO:0009631: cold acclimation | 2.25E-02 |
| 93 | GO:0045087: innate immune response | 2.41E-02 |
| 94 | GO:0045454: cell redox homeostasis | 2.53E-02 |
| 95 | GO:0042542: response to hydrogen peroxide | 2.80E-02 |
| 96 | GO:0009793: embryo development ending in seed dormancy | 2.90E-02 |
| 97 | GO:0006979: response to oxidative stress | 3.17E-02 |
| 98 | GO:0006364: rRNA processing | 3.56E-02 |
| 99 | GO:0009585: red, far-red light phototransduction | 3.56E-02 |
| 100 | GO:0043086: negative regulation of catalytic activity | 4.01E-02 |
| 101 | GO:0009626: plant-type hypersensitive response | 4.20E-02 |
| 102 | GO:0009624: response to nematode | 4.58E-02 |
| 103 | GO:0006396: RNA processing | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 2 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 3 | GO:0005363: maltose transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
| 5 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 6 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 7 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 8 | GO:0019843: rRNA binding | 4.22E-24 |
| 9 | GO:0003735: structural constituent of ribosome | 3.30E-20 |
| 10 | GO:0008266: poly(U) RNA binding | 1.34E-07 |
| 11 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 7.65E-06 |
| 12 | GO:0005528: FK506 binding | 1.79E-05 |
| 13 | GO:0004856: xylulokinase activity | 1.31E-04 |
| 14 | GO:0009496: plastoquinol--plastocyanin reductase activity | 1.31E-04 |
| 15 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.31E-04 |
| 16 | GO:0008158: hedgehog receptor activity | 1.31E-04 |
| 17 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 1.31E-04 |
| 18 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.31E-04 |
| 19 | GO:0004853: uroporphyrinogen decarboxylase activity | 1.31E-04 |
| 20 | GO:0004614: phosphoglucomutase activity | 3.03E-04 |
| 21 | GO:0033201: alpha-1,4-glucan synthase activity | 3.03E-04 |
| 22 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 3.03E-04 |
| 23 | GO:0008967: phosphoglycolate phosphatase activity | 3.03E-04 |
| 24 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.54E-04 |
| 25 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 4.99E-04 |
| 26 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 4.99E-04 |
| 27 | GO:0004324: ferredoxin-NADP+ reductase activity | 4.99E-04 |
| 28 | GO:0004373: glycogen (starch) synthase activity | 4.99E-04 |
| 29 | GO:0017150: tRNA dihydrouridine synthase activity | 4.99E-04 |
| 30 | GO:0002161: aminoacyl-tRNA editing activity | 4.99E-04 |
| 31 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.99E-04 |
| 32 | GO:0016149: translation release factor activity, codon specific | 7.14E-04 |
| 33 | GO:0004550: nucleoside diphosphate kinase activity | 7.14E-04 |
| 34 | GO:0043023: ribosomal large subunit binding | 7.14E-04 |
| 35 | GO:0016491: oxidoreductase activity | 8.61E-04 |
| 36 | GO:0009011: starch synthase activity | 9.47E-04 |
| 37 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 9.47E-04 |
| 38 | GO:0050662: coenzyme binding | 9.69E-04 |
| 39 | GO:0048038: quinone binding | 1.11E-03 |
| 40 | GO:0004372: glycine hydroxymethyltransferase activity | 1.20E-03 |
| 41 | GO:0003959: NADPH dehydrogenase activity | 1.20E-03 |
| 42 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.20E-03 |
| 43 | GO:0004252: serine-type endopeptidase activity | 1.27E-03 |
| 44 | GO:0004130: cytochrome-c peroxidase activity | 1.47E-03 |
| 45 | GO:0004602: glutathione peroxidase activity | 1.76E-03 |
| 46 | GO:0051920: peroxiredoxin activity | 1.76E-03 |
| 47 | GO:0008236: serine-type peptidase activity | 1.95E-03 |
| 48 | GO:0004222: metalloendopeptidase activity | 2.26E-03 |
| 49 | GO:0016209: antioxidant activity | 2.39E-03 |
| 50 | GO:0003747: translation release factor activity | 3.08E-03 |
| 51 | GO:0005384: manganese ion transmembrane transporter activity | 3.46E-03 |
| 52 | GO:0008047: enzyme activator activity | 3.84E-03 |
| 53 | GO:0000049: tRNA binding | 4.65E-03 |
| 54 | GO:0004089: carbonate dehydratase activity | 5.08E-03 |
| 55 | GO:0015095: magnesium ion transmembrane transporter activity | 5.08E-03 |
| 56 | GO:0031072: heat shock protein binding | 5.08E-03 |
| 57 | GO:0004857: enzyme inhibitor activity | 6.91E-03 |
| 58 | GO:0022891: substrate-specific transmembrane transporter activity | 8.95E-03 |
| 59 | GO:0047134: protein-disulfide reductase activity | 1.00E-02 |
| 60 | GO:0004812: aminoacyl-tRNA ligase activity | 1.00E-02 |
| 61 | GO:0004791: thioredoxin-disulfide reductase activity | 1.18E-02 |
| 62 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.42E-02 |
| 63 | GO:0003729: mRNA binding | 1.51E-02 |
| 64 | GO:0008237: metallopeptidase activity | 1.55E-02 |
| 65 | GO:0004601: peroxidase activity | 1.71E-02 |
| 66 | GO:0016168: chlorophyll binding | 1.75E-02 |
| 67 | GO:0003723: RNA binding | 2.74E-02 |
| 68 | GO:0004364: glutathione transferase activity | 2.80E-02 |
| 69 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.05E-02 |
| 70 | GO:0051082: unfolded protein binding | 4.58E-02 |
| 71 | GO:0015035: protein disulfide oxidoreductase activity | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.02E-72 |
| 4 | GO:0009570: chloroplast stroma | 3.10E-55 |
| 5 | GO:0009941: chloroplast envelope | 5.49E-52 |
| 6 | GO:0009534: chloroplast thylakoid | 3.34E-41 |
| 7 | GO:0009579: thylakoid | 6.65E-36 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 1.72E-32 |
| 9 | GO:0005840: ribosome | 3.26E-20 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 5.57E-15 |
| 11 | GO:0031977: thylakoid lumen | 7.95E-12 |
| 12 | GO:0010319: stromule | 9.18E-08 |
| 13 | GO:0010287: plastoglobule | 3.79E-07 |
| 14 | GO:0009533: chloroplast stromal thylakoid | 6.60E-07 |
| 15 | GO:0009295: nucleoid | 4.21E-06 |
| 16 | GO:0005960: glycine cleavage complex | 7.65E-06 |
| 17 | GO:0009508: plastid chromosome | 8.19E-06 |
| 18 | GO:0030095: chloroplast photosystem II | 1.02E-05 |
| 19 | GO:0009538: photosystem I reaction center | 8.68E-05 |
| 20 | GO:0009706: chloroplast inner membrane | 9.19E-05 |
| 21 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.34E-04 |
| 22 | GO:0048046: apoplast | 1.63E-04 |
| 23 | GO:0015934: large ribosomal subunit | 2.35E-04 |
| 24 | GO:0000311: plastid large ribosomal subunit | 2.58E-04 |
| 25 | GO:0030093: chloroplast photosystem I | 3.03E-04 |
| 26 | GO:0016020: membrane | 3.72E-04 |
| 27 | GO:0009654: photosystem II oxygen evolving complex | 5.12E-04 |
| 28 | GO:0009536: plastid | 7.49E-04 |
| 29 | GO:0009517: PSII associated light-harvesting complex II | 9.47E-04 |
| 30 | GO:0009523: photosystem II | 1.04E-03 |
| 31 | GO:0019898: extrinsic component of membrane | 1.04E-03 |
| 32 | GO:0009512: cytochrome b6f complex | 1.20E-03 |
| 33 | GO:0009840: chloroplastic endopeptidase Clp complex | 1.76E-03 |
| 34 | GO:0009501: amyloplast | 2.39E-03 |
| 35 | GO:0005763: mitochondrial small ribosomal subunit | 3.08E-03 |
| 36 | GO:0042644: chloroplast nucleoid | 3.08E-03 |
| 37 | GO:0031969: chloroplast membrane | 3.81E-03 |
| 38 | GO:0022625: cytosolic large ribosomal subunit | 4.06E-03 |
| 39 | GO:0000312: plastid small ribosomal subunit | 5.52E-03 |
| 40 | GO:0042651: thylakoid membrane | 7.40E-03 |
| 41 | GO:0015935: small ribosomal subunit | 7.91E-03 |
| 42 | GO:0009532: plastid stroma | 7.91E-03 |
| 43 | GO:0022626: cytosolic ribosome | 1.22E-02 |
| 44 | GO:0030529: intracellular ribonucleoprotein complex | 1.68E-02 |