Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G18390

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900067: regulation of cellular response to alkaline pH0.00E+00
2GO:0006005: L-fucose biosynthetic process0.00E+00
3GO:1903086: negative regulation of sinapate ester biosynthetic process0.00E+00
4GO:2001142: nicotinate transport0.00E+00
5GO:0032497: detection of lipopolysaccharide0.00E+00
6GO:0019427: acetyl-CoA biosynthetic process from acetate0.00E+00
7GO:0042353: fucose biosynthetic process0.00E+00
8GO:0019481: L-alanine catabolic process, by transamination0.00E+00
9GO:0032499: detection of peptidoglycan0.00E+00
10GO:2001143: N-methylnicotinate transport0.00E+00
11GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
12GO:0010200: response to chitin5.02E-11
13GO:0009699: phenylpropanoid biosynthetic process3.90E-09
14GO:0006468: protein phosphorylation4.26E-08
15GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response6.67E-08
16GO:0002679: respiratory burst involved in defense response3.35E-07
17GO:0042742: defense response to bacterium5.43E-06
18GO:0009611: response to wounding1.00E-05
19GO:0046777: protein autophosphorylation1.63E-05
20GO:0051865: protein autoubiquitination3.30E-05
21GO:0002229: defense response to oomycetes6.64E-05
22GO:0010193: response to ozone6.64E-05
23GO:0033358: UDP-L-arabinose biosynthetic process9.87E-05
24GO:0045227: capsule polysaccharide biosynthetic process9.87E-05
25GO:0007166: cell surface receptor signaling pathway1.51E-04
26GO:0009225: nucleotide-sugar metabolic process1.54E-04
27GO:0009617: response to bacterium1.67E-04
28GO:0045087: innate immune response3.12E-04
29GO:0042350: GDP-L-fucose biosynthetic process4.07E-04
30GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.07E-04
31GO:0010726: positive regulation of hydrogen peroxide metabolic process4.07E-04
32GO:0018920: glyphosate metabolic process4.07E-04
33GO:0080157: regulation of plant-type cell wall organization or biogenesis4.07E-04
34GO:0050691: regulation of defense response to virus by host4.07E-04
35GO:0071277: cellular response to calcium ion4.07E-04
36GO:0046244: salicylic acid catabolic process4.07E-04
37GO:0032491: detection of molecule of fungal origin4.07E-04
38GO:1900384: regulation of flavonol biosynthetic process4.07E-04
39GO:0006083: acetate metabolic process4.07E-04
40GO:0009966: regulation of signal transduction4.07E-04
41GO:0045010: actin nucleation4.76E-04
42GO:0048544: recognition of pollen5.80E-04
43GO:0010372: positive regulation of gibberellin biosynthetic process8.83E-04
44GO:0002221: pattern recognition receptor signaling pathway8.83E-04
45GO:0046939: nucleotide phosphorylation8.83E-04
46GO:0010155: regulation of proton transport8.83E-04
47GO:0042754: negative regulation of circadian rhythm8.83E-04
48GO:0009805: coumarin biosynthetic process8.83E-04
49GO:0007064: mitotic sister chromatid cohesion9.55E-04
50GO:0009698: phenylpropanoid metabolic process1.10E-03
51GO:0009620: response to fungus1.10E-03
52GO:0010015: root morphogenesis1.10E-03
53GO:0009816: defense response to bacterium, incompatible interaction1.18E-03
54GO:0006952: defense response1.41E-03
55GO:0055046: microgametogenesis1.42E-03
56GO:0080168: abscisic acid transport1.43E-03
57GO:0070475: rRNA base methylation1.43E-03
58GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.43E-03
59GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.43E-03
60GO:0010447: response to acidic pH1.43E-03
61GO:0006979: response to oxidative stress1.48E-03
62GO:0008219: cell death1.54E-03
63GO:0070588: calcium ion transmembrane transport1.80E-03
64GO:0080167: response to karrikin1.96E-03
65GO:0043207: response to external biotic stimulus2.07E-03
66GO:0009800: cinnamic acid biosynthetic process2.07E-03
67GO:0033014: tetrapyrrole biosynthetic process2.07E-03
68GO:0030100: regulation of endocytosis2.07E-03
69GO:0009399: nitrogen fixation2.07E-03
70GO:0071323: cellular response to chitin2.07E-03
71GO:0051131: chaperone-mediated protein complex assembly2.07E-03
72GO:0009863: salicylic acid mediated signaling pathway2.22E-03
73GO:0009695: jasmonic acid biosynthetic process2.46E-03
74GO:0016998: cell wall macromolecule catabolic process2.70E-03
75GO:0010107: potassium ion import2.78E-03
76GO:0071219: cellular response to molecule of bacterial origin2.78E-03
77GO:0034440: lipid oxidation2.78E-03
78GO:1902347: response to strigolactone2.78E-03
79GO:0080142: regulation of salicylic acid biosynthetic process2.78E-03
80GO:0015743: malate transport2.78E-03
81GO:0033320: UDP-D-xylose biosynthetic process2.78E-03
82GO:0009652: thigmotropism2.78E-03
83GO:0009555: pollen development3.19E-03
84GO:0040007: growth3.22E-03
85GO:0006012: galactose metabolic process3.22E-03
86GO:0009306: protein secretion3.50E-03
87GO:0043484: regulation of RNA splicing3.56E-03
88GO:0009164: nucleoside catabolic process3.56E-03
89GO:2000762: regulation of phenylpropanoid metabolic process3.56E-03
90GO:0030041: actin filament polymerization3.56E-03
91GO:0009823: cytokinin catabolic process3.56E-03
92GO:0031347: regulation of defense response3.67E-03
93GO:0010224: response to UV-B4.40E-03
94GO:0000470: maturation of LSU-rRNA4.41E-03
95GO:0042732: D-xylose metabolic process4.41E-03
96GO:0048317: seed morphogenesis4.41E-03
97GO:0006796: phosphate-containing compound metabolic process4.41E-03
98GO:1900425: negative regulation of defense response to bacterium4.41E-03
99GO:0006559: L-phenylalanine catabolic process4.41E-03
100GO:0010337: regulation of salicylic acid metabolic process4.41E-03
101GO:0010942: positive regulation of cell death4.41E-03
102GO:0006751: glutathione catabolic process4.41E-03
103GO:0010256: endomembrane system organization4.41E-03
104GO:0016310: phosphorylation4.79E-03
105GO:0009423: chorismate biosynthetic process5.31E-03
106GO:0010555: response to mannitol5.31E-03
107GO:0080086: stamen filament development5.31E-03
108GO:2000067: regulation of root morphogenesis5.31E-03
109GO:0006744: ubiquinone biosynthetic process6.28E-03
110GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway6.28E-03
111GO:0010044: response to aluminum ion6.28E-03
112GO:0006955: immune response6.28E-03
113GO:0006402: mRNA catabolic process7.30E-03
114GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline7.30E-03
115GO:0009819: drought recovery7.30E-03
116GO:0009690: cytokinin metabolic process7.30E-03
117GO:1900150: regulation of defense response to fungus7.30E-03
118GO:2000070: regulation of response to water deprivation7.30E-03
119GO:0048658: anther wall tapetum development7.30E-03
120GO:0016567: protein ubiquitination8.23E-03
121GO:0007186: G-protein coupled receptor signaling pathway8.38E-03
122GO:0010262: somatic embryogenesis8.38E-03
123GO:0009808: lignin metabolic process8.38E-03
124GO:0009932: cell tip growth8.38E-03
125GO:0009737: response to abscisic acid8.70E-03
126GO:0046685: response to arsenic-containing substance9.51E-03
127GO:0090333: regulation of stomatal closure9.51E-03
128GO:0006783: heme biosynthetic process9.51E-03
129GO:0098656: anion transmembrane transport9.51E-03
130GO:0009845: seed germination9.73E-03
131GO:0009817: defense response to fungus, incompatible interaction1.04E-02
132GO:0006779: porphyrin-containing compound biosynthetic process1.07E-02
133GO:2000280: regulation of root development1.07E-02
134GO:0008202: steroid metabolic process1.07E-02
135GO:0009813: flavonoid biosynthetic process1.09E-02
136GO:0035556: intracellular signal transduction1.16E-02
137GO:0006782: protoporphyrinogen IX biosynthetic process1.19E-02
138GO:0019538: protein metabolic process1.19E-02
139GO:0006032: chitin catabolic process1.19E-02
140GO:0048829: root cap development1.19E-02
141GO:0009073: aromatic amino acid family biosynthetic process1.32E-02
142GO:1903507: negative regulation of nucleic acid-templated transcription1.32E-02
143GO:0000272: polysaccharide catabolic process1.32E-02
144GO:0009750: response to fructose1.32E-02
145GO:0009751: response to salicylic acid1.39E-02
146GO:0009753: response to jasmonic acid1.58E-02
147GO:0046274: lignin catabolic process1.59E-02
148GO:0008152: metabolic process1.65E-02
149GO:0051707: response to other organism1.70E-02
150GO:0034605: cellular response to heat1.74E-02
151GO:0002237: response to molecule of bacterial origin1.74E-02
152GO:0009901: anther dehiscence1.88E-02
153GO:0090351: seedling development1.88E-02
154GO:0046854: phosphatidylinositol phosphorylation1.88E-02
155GO:0009969: xyloglucan biosynthetic process1.88E-02
156GO:0006357: regulation of transcription from RNA polymerase II promoter2.17E-02
157GO:0080147: root hair cell development2.19E-02
158GO:0006487: protein N-linked glycosylation2.19E-02
159GO:0009809: lignin biosynthetic process2.30E-02
160GO:0061077: chaperone-mediated protein folding2.51E-02
161GO:0031408: oxylipin biosynthetic process2.51E-02
162GO:0098542: defense response to other organism2.51E-02
163GO:2000022: regulation of jasmonic acid mediated signaling pathway2.68E-02
164GO:0030433: ubiquitin-dependent ERAD pathway2.68E-02
165GO:0009686: gibberellin biosynthetic process2.85E-02
166GO:0009411: response to UV2.85E-02
167GO:0009626: plant-type hypersensitive response2.90E-02
168GO:0046686: response to cadmium ion2.94E-02
169GO:0006817: phosphate ion transport3.03E-02
170GO:0045492: xylan biosynthetic process3.03E-02
171GO:0019722: calcium-mediated signaling3.03E-02
172GO:0010089: xylem development3.03E-02
173GO:0009738: abscisic acid-activated signaling pathway3.18E-02
174GO:0018105: peptidyl-serine phosphorylation3.37E-02
175GO:0006396: RNA processing3.37E-02
176GO:0000271: polysaccharide biosynthetic process3.39E-02
177GO:0010118: stomatal movement3.39E-02
178GO:0006606: protein import into nucleus3.39E-02
179GO:0048653: anther development3.39E-02
180GO:0009742: brassinosteroid mediated signaling pathway3.47E-02
181GO:0009960: endosperm development3.58E-02
182GO:0045489: pectin biosynthetic process3.58E-02
183GO:0010197: polar nucleus fusion3.58E-02
184GO:0048868: pollen tube development3.58E-02
185GO:0009749: response to glucose3.96E-02
186GO:0031047: gene silencing by RNA4.35E-02
187GO:0032502: developmental process4.35E-02
188GO:0009630: gravitropism4.35E-02
189GO:0010090: trichome morphogenesis4.55E-02
190GO:1901657: glycosyl compound metabolic process4.55E-02
191GO:0006464: cellular protein modification process4.76E-02
192GO:0055114: oxidation-reduction process4.85E-02
193GO:0009408: response to heat4.88E-02
194GO:0006904: vesicle docking involved in exocytosis4.97E-02
RankGO TermAdjusted P value
1GO:0005522: profilin binding0.00E+00
2GO:0016710: trans-cinnamate 4-monooxygenase activity0.00E+00
3GO:0046409: p-coumarate 3-hydroxylase activity0.00E+00
4GO:0047734: CDP-glycerol diphosphatase activity0.00E+00
5GO:2001080: chitosan binding0.00E+00
6GO:0090417: N-methylnicotinate transporter activity0.00E+00
7GO:0032442: phenylcoumaran benzylic ether reductase activity0.00E+00
8GO:0090416: nicotinate transporter activity0.00E+00
9GO:0010857: calcium-dependent protein kinase activity0.00E+00
10GO:0016301: kinase activity8.45E-09
11GO:0005524: ATP binding9.32E-08
12GO:0004674: protein serine/threonine kinase activity1.26E-07
13GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.53E-05
14GO:0005516: calmodulin binding4.60E-05
15GO:0004675: transmembrane receptor protein serine/threonine kinase activity9.28E-05
16GO:0050373: UDP-arabinose 4-epimerase activity9.87E-05
17GO:0004672: protein kinase activity1.31E-04
18GO:0047631: ADP-ribose diphosphatase activity1.53E-04
19GO:0003978: UDP-glucose 4-epimerase activity2.94E-04
20GO:0015085: calcium ion transmembrane transporter activity4.07E-04
21GO:0051669: fructan beta-fructosidase activity4.07E-04
22GO:0031219: levanase activity4.07E-04
23GO:0090440: abscisic acid transporter activity4.07E-04
24GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity4.07E-04
25GO:0003866: 3-phosphoshikimate 1-carboxyvinyltransferase activity4.07E-04
26GO:0050577: GDP-L-fucose synthase activity4.07E-04
27GO:0003987: acetate-CoA ligase activity4.07E-04
28GO:0016207: 4-coumarate-CoA ligase activity6.96E-04
29GO:1990585: hydroxyproline O-arabinosyltransferase activity8.83E-04
30GO:0004103: choline kinase activity8.83E-04
31GO:0008883: glutamyl-tRNA reductase activity8.83E-04
32GO:0001047: core promoter binding8.83E-04
33GO:0043565: sequence-specific DNA binding1.08E-03
34GO:0005388: calcium-transporting ATPase activity1.42E-03
35GO:0045548: phenylalanine ammonia-lyase activity1.43E-03
36GO:0003840: gamma-glutamyltransferase activity1.43E-03
37GO:0036374: glutathione hydrolase activity1.43E-03
38GO:0031683: G-protein beta/gamma-subunit complex binding1.43E-03
39GO:0046423: allene-oxide cyclase activity1.43E-03
40GO:0016165: linoleate 13S-lipoxygenase activity1.43E-03
41GO:0001664: G-protein coupled receptor binding1.43E-03
42GO:0050660: flavin adenine dinucleotide binding1.73E-03
43GO:0030246: carbohydrate binding1.79E-03
44GO:0008061: chitin binding1.80E-03
45GO:0019201: nucleotide kinase activity2.07E-03
46GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity2.07E-03
47GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity2.07E-03
48GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity2.07E-03
49GO:0033612: receptor serine/threonine kinase binding2.70E-03
50GO:0019706: protein-cysteine S-palmitoyltransferase activity2.70E-03
51GO:0043015: gamma-tubulin binding2.78E-03
52GO:0019199: transmembrane receptor protein kinase activity2.78E-03
53GO:0005253: anion channel activity2.78E-03
54GO:0004842: ubiquitin-protein transferase activity3.15E-03
55GO:0019139: cytokinin dehydrogenase activity3.56E-03
56GO:0018685: alkane 1-monooxygenase activity3.56E-03
57GO:0002020: protease binding3.56E-03
58GO:0004356: glutamate-ammonia ligase activity3.56E-03
59GO:0045431: flavonol synthase activity3.56E-03
60GO:0009055: electron carrier activity4.40E-03
61GO:0000210: NAD+ diphosphatase activity4.41E-03
62GO:0016208: AMP binding4.41E-03
63GO:0016462: pyrophosphatase activity4.41E-03
64GO:0035673: oligopeptide transmembrane transporter activity4.41E-03
65GO:0048040: UDP-glucuronate decarboxylase activity4.41E-03
66GO:0050662: coenzyme binding4.76E-03
67GO:0004017: adenylate kinase activity5.31E-03
68GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides5.31E-03
69GO:0004656: procollagen-proline 4-dioxygenase activity5.31E-03
70GO:0019900: kinase binding5.31E-03
71GO:0051020: GTPase binding5.31E-03
72GO:0070403: NAD+ binding5.31E-03
73GO:0102425: myricetin 3-O-glucosyltransferase activity6.28E-03
74GO:0102360: daphnetin 3-O-glucosyltransferase activity6.28E-03
75GO:0004427: inorganic diphosphatase activity6.28E-03
76GO:0016621: cinnamoyl-CoA reductase activity6.28E-03
77GO:0015140: malate transmembrane transporter activity6.28E-03
78GO:0008143: poly(A) binding6.28E-03
79GO:0004143: diacylglycerol kinase activity6.28E-03
80GO:0003779: actin binding6.36E-03
81GO:0047893: flavonol 3-O-glucosyltransferase activity7.30E-03
82GO:0004525: ribonuclease III activity7.30E-03
83GO:0004714: transmembrane receptor protein tyrosine kinase activity7.30E-03
84GO:0004430: 1-phosphatidylinositol 4-kinase activity8.38E-03
85GO:0003951: NAD+ kinase activity8.38E-03
86GO:0008142: oxysterol binding8.38E-03
87GO:0008375: acetylglucosaminyltransferase activity8.86E-03
88GO:0009931: calcium-dependent protein serine/threonine kinase activity8.86E-03
89GO:0004683: calmodulin-dependent protein kinase activity9.35E-03
90GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.04E-02
91GO:0004568: chitinase activity1.19E-02
92GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.22E-02
93GO:0044212: transcription regulatory region DNA binding1.27E-02
94GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.32E-02
95GO:0015198: oligopeptide transporter activity1.46E-02
96GO:0005315: inorganic phosphate transmembrane transporter activity1.59E-02
97GO:0008139: nuclear localization sequence binding1.59E-02
98GO:0019888: protein phosphatase regulator activity1.59E-02
99GO:0008131: primary amine oxidase activity1.74E-02
100GO:0035091: phosphatidylinositol binding1.84E-02
101GO:0003714: transcription corepressor activity2.19E-02
102GO:0031418: L-ascorbic acid binding2.19E-02
103GO:0003682: chromatin binding2.48E-02
104GO:0035251: UDP-glucosyltransferase activity2.51E-02
105GO:0036459: thiol-dependent ubiquitinyl hydrolase activity2.51E-02
106GO:0031625: ubiquitin protein ligase binding2.55E-02
107GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.68E-02
108GO:0022891: substrate-specific transmembrane transporter activity2.85E-02
109GO:0008514: organic anion transmembrane transporter activity3.03E-02
110GO:0005509: calcium ion binding3.07E-02
111GO:0016874: ligase activity3.08E-02
112GO:0005102: receptor binding3.21E-02
113GO:0005515: protein binding3.25E-02
114GO:0051082: unfolded protein binding3.27E-02
115GO:0008536: Ran GTPase binding3.58E-02
116GO:0016853: isomerase activity3.77E-02
117GO:0016758: transferase activity, transferring hexosyl groups3.98E-02
118GO:0004871: signal transducer activity4.00E-02
119GO:0004843: thiol-dependent ubiquitin-specific protease activity4.15E-02
120GO:0004722: protein serine/threonine phosphatase activity4.23E-02
121GO:0004518: nuclease activity4.35E-02
122GO:0051015: actin filament binding4.55E-02
123GO:0015144: carbohydrate transmembrane transporter activity4.88E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.00E-11
2GO:0016021: integral component of membrane2.12E-05
3GO:0032580: Golgi cisterna membrane9.54E-05
4GO:0005911: cell-cell junction4.07E-04
5GO:0016442: RISC complex4.07E-04
6GO:0010494: cytoplasmic stress granule6.96E-04
7GO:0090404: pollen tube tip1.10E-03
8GO:0005768: endosome1.13E-03
9GO:0000813: ESCRT I complex3.56E-03
10GO:0005770: late endosome4.43E-03
11GO:0016363: nuclear matrix5.31E-03
12GO:0030173: integral component of Golgi membrane5.31E-03
13GO:0010008: endosome membrane5.43E-03
14GO:0005794: Golgi apparatus8.10E-03
15GO:0009514: glyoxysome8.38E-03
16GO:0048471: perinuclear region of cytoplasm1.32E-02
17GO:0031902: late endosome membrane1.57E-02
18GO:0043231: intracellular membrane-bounded organelle1.65E-02
19GO:0090406: pollen tube1.70E-02
20GO:0009505: plant-type cell wall1.96E-02
21GO:0043234: protein complex2.04E-02
22GO:0005737: cytoplasm2.28E-02
23GO:0005802: trans-Golgi network2.38E-02
24GO:0016020: membrane2.58E-02
25GO:0005834: heterotrimeric G-protein complex2.90E-02
26GO:0005783: endoplasmic reticulum2.96E-02
27GO:0030136: clathrin-coated vesicle3.21E-02
28GO:0005618: cell wall3.52E-02
29GO:0031965: nuclear membrane3.96E-02
30GO:0000145: exocyst4.35E-02
31GO:0005778: peroxisomal membrane4.97E-02
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Gene type



Gene DE type