co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G18080

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0044843: cell cycle G1/S phase transition	0.00E+00
2	GO:0006412: translation	7.25E-86
3	GO:0042254: ribosome biogenesis	4.68E-16
4	GO:0000027: ribosomal large subunit assembly	2.33E-13
5	GO:0009735: response to cytokinin	9.91E-07
6	GO:1902626: assembly of large subunit precursor of preribosome	3.53E-06
7	GO:0006626: protein targeting to mitochondrion	9.09E-06
8	GO:0006364: rRNA processing	5.35E-05
9	GO:0009955: adaxial/abaxial pattern specification	5.36E-05
10	GO:0000028: ribosomal small subunit assembly	9.31E-05
11	GO:0006407: rRNA export from nucleus	1.37E-04
12	GO:0000494: box C/D snoRNA 3'-end processing	1.37E-04
13	GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.37E-04
14	GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.37E-04
15	GO:1990258: histone glutamine methylation	1.37E-04
16	GO:0006820: anion transport	2.75E-04
17	GO:0006414: translational elongation	3.00E-04
18	GO:0045859: regulation of protein kinase activity	3.16E-04
19	GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	3.16E-04
20	GO:0048569: post-embryonic animal organ development	3.16E-04
21	GO:0008283: cell proliferation	4.03E-04
22	GO:0009150: purine ribonucleotide metabolic process	5.20E-04
23	GO:0042256: mature ribosome assembly	5.20E-04
24	GO:0007005: mitochondrion organization	6.50E-04
25	GO:0006515: misfolded or incompletely synthesized protein catabolic process	7.44E-04
26	GO:0006164: purine nucleotide biosynthetic process	7.44E-04
27	GO:0008033: tRNA processing	8.93E-04
28	GO:0042274: ribosomal small subunit biogenesis	9.85E-04
29	GO:0080156: mitochondrial mRNA modification	1.17E-03
30	GO:0031167: rRNA methylation	1.25E-03
31	GO:0000470: maturation of LSU-rRNA	1.53E-03
32	GO:0006458: 'de novo' protein folding	1.83E-03
33	GO:0000245: spliceosomal complex assembly	1.83E-03
34	GO:0016444: somatic cell DNA recombination	1.83E-03
35	GO:0001558: regulation of cell growth	2.85E-03
36	GO:0043562: cellular response to nitrogen levels	2.85E-03
37	GO:0001510: RNA methylation	2.85E-03
38	GO:0006189: 'de novo' IMP biosynthetic process	3.22E-03
39	GO:0098656: anion transmembrane transport	3.22E-03
40	GO:0009965: leaf morphogenesis	3.97E-03
41	GO:0006259: DNA metabolic process	4.00E-03
42	GO:0010015: root morphogenesis	4.42E-03
43	GO:0006913: nucleocytoplasmic transport	4.42E-03
44	GO:0006790: sulfur compound metabolic process	4.85E-03
45	GO:0010102: lateral root morphogenesis	5.30E-03
46	GO:0048467: gynoecium development	5.76E-03
47	GO:0030150: protein import into mitochondrial matrix	7.22E-03
48	GO:0051302: regulation of cell division	7.73E-03
49	GO:0006334: nucleosome assembly	8.26E-03
50	GO:0061077: chaperone-mediated protein folding	8.26E-03
51	GO:0040007: growth	9.35E-03
52	GO:0015031: protein transport	1.31E-02
53	GO:0006635: fatty acid beta-oxidation	1.36E-02
54	GO:0016579: protein deubiquitination	1.69E-02
55	GO:0042128: nitrate assimilation	1.90E-02
56	GO:0006811: ion transport	2.28E-02
57	GO:0010043: response to zinc ion	2.36E-02
58	GO:0000724: double-strand break repair via homologous recombination	2.43E-02
59	GO:0009744: response to sucrose	3.01E-02
60	GO:0009793: embryo development ending in seed dormancy	3.18E-02
61	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.45E-02
62	GO:0009734: auxin-activated signaling pathway	4.66E-02
63	GO:0006396: RNA processing	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity	0.00E+00
2	GO:0003735: structural constituent of ribosome	1.80E-95
3	GO:0003729: mRNA binding	1.27E-22
4	GO:0019843: rRNA binding	6.04E-10
5	GO:0003746: translation elongation factor activity	1.46E-08
6	GO:0008097: 5S rRNA binding	8.27E-06
7	GO:0015288: porin activity	9.31E-05
8	GO:0008308: voltage-gated anion channel activity	1.17E-04
9	GO:0005080: protein kinase C binding	1.37E-04
10	GO:1990259: histone-glutamine methyltransferase activity	1.37E-04
11	GO:0004679: AMP-activated protein kinase activity	1.37E-04
12	GO:0003723: RNA binding	1.64E-04
13	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.09E-04
14	GO:0044183: protein binding involved in protein folding	2.39E-04
15	GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity	3.16E-04
16	GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity	3.16E-04
17	GO:0070361: mitochondrial light strand promoter anti-sense binding	3.16E-04
18	GO:0035241: protein-arginine omega-N monomethyltransferase activity	3.16E-04
19	GO:0008649: rRNA methyltransferase activity	5.20E-04
20	GO:0008469: histone-arginine N-methyltransferase activity	5.20E-04
21	GO:0047627: adenylylsulfatase activity	7.44E-04
22	GO:0004040: amidase activity	1.25E-03
23	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	1.53E-03
24	GO:0019887: protein kinase regulator activity	1.83E-03
25	GO:0008235: metalloexopeptidase activity	2.15E-03
26	GO:0030515: snoRNA binding	2.15E-03
27	GO:0003678: DNA helicase activity	3.22E-03
28	GO:0001055: RNA polymerase II activity	3.60E-03
29	GO:0001054: RNA polymerase I activity	4.42E-03
30	GO:0001056: RNA polymerase III activity	4.85E-03
31	GO:0015266: protein channel activity	5.30E-03
32	GO:0051082: unfolded protein binding	6.76E-03
33	GO:0004176: ATP-dependent peptidase activity	8.26E-03
34	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	8.26E-03
35	GO:0010181: FMN binding	1.23E-02
36	GO:0004004: ATP-dependent RNA helicase activity	1.98E-02
37	GO:0008236: serine-type peptidase activity	2.05E-02
38	GO:0050897: cobalt ion binding	2.36E-02
39	GO:0042393: histone binding	2.76E-02
40	GO:0051539: 4 iron, 4 sulfur cluster binding	2.76E-02
41	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.72E-02

Rank	GO Term	Adjusted P value
1	GO:0005832: chaperonin-containing T-complex	0.00E+00
2	GO:0022626: cytosolic ribosome	5.03E-64
3	GO:0022625: cytosolic large ribosomal subunit	2.88E-61
4	GO:0005840: ribosome	7.58E-53
5	GO:0022627: cytosolic small ribosomal subunit	7.30E-41
6	GO:0005829: cytosol	1.25E-25
7	GO:0005737: cytoplasm	5.40E-19
8	GO:0009506: plasmodesma	8.10E-19
9	GO:0005730: nucleolus	5.82E-18
10	GO:0015934: large ribosomal subunit	3.25E-12
11	GO:0005773: vacuole	2.55E-11
12	GO:0015935: small ribosomal subunit	6.71E-11
13	GO:0005774: vacuolar membrane	1.22E-09
14	GO:0016020: membrane	1.73E-08
15	GO:0005618: cell wall	2.31E-07
16	GO:0005853: eukaryotic translation elongation factor 1 complex	3.53E-06
17	GO:0005886: plasma membrane	1.22E-05
18	GO:0009507: chloroplast	6.72E-05
19	GO:0046930: pore complex	1.17E-04
20	GO:0030686: 90S preribosome	1.37E-04
21	GO:0005758: mitochondrial intermembrane space	4.93E-04
22	GO:0005741: mitochondrial outer membrane	5.96E-04
23	GO:0031428: box C/D snoRNP complex	1.53E-03
24	GO:0016272: prefoldin complex	1.83E-03
25	GO:0031359: integral component of chloroplast outer membrane	2.15E-03
26	GO:0005742: mitochondrial outer membrane translocase complex	2.85E-03
27	GO:0005736: DNA-directed RNA polymerase I complex	3.22E-03
28	GO:0005666: DNA-directed RNA polymerase III complex	3.60E-03
29	GO:0015030: Cajal body	3.60E-03
30	GO:0000418: DNA-directed RNA polymerase IV complex	4.00E-03
31	GO:0048471: perinuclear region of cytoplasm	4.42E-03
32	GO:0032040: small-subunit processome	4.85E-03
33	GO:0005665: DNA-directed RNA polymerase II, core complex	4.85E-03
34	GO:0005743: mitochondrial inner membrane	6.16E-03
35	GO:0000419: DNA-directed RNA polymerase V complex	6.71E-03
36	GO:0030529: intracellular ribonucleoprotein complex	1.76E-02
37	GO:0005747: mitochondrial respiratory chain complex I	4.29E-02
38	GO:0009536: plastid	4.36E-02