co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G17140

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042493: response to drug	0.00E+00
2	GO:0006399: tRNA metabolic process	0.00E+00
3	GO:0010493: Lewis a epitope biosynthetic process	3.77E-05
4	GO:0000476: maturation of 4.5S rRNA	3.77E-05
5	GO:0000967: rRNA 5'-end processing	3.77E-05
6	GO:0034470: ncRNA processing	9.40E-05
7	GO:0010275: NAD(P)H dehydrogenase complex assembly	9.40E-05
8	GO:0006741: NADP biosynthetic process	9.40E-05
9	GO:0005977: glycogen metabolic process	1.63E-04
10	GO:0019674: NAD metabolic process	1.63E-04
11	GO:2001141: regulation of RNA biosynthetic process	2.40E-04
12	GO:0019363: pyridine nucleotide biosynthetic process	2.40E-04
13	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	2.40E-04
14	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.40E-04
15	GO:0009650: UV protection	2.40E-04
16	GO:0010021: amylopectin biosynthetic process	3.24E-04
17	GO:0016558: protein import into peroxisome matrix	4.13E-04
18	GO:0010492: maintenance of shoot apical meristem identity	8.13E-04
19	GO:0006605: protein targeting	8.13E-04
20	GO:0071482: cellular response to light stimulus	9.23E-04
21	GO:0010112: regulation of systemic acquired resistance	1.04E-03
22	GO:0006098: pentose-phosphate shunt	1.04E-03
23	GO:0048507: meristem development	1.04E-03
24	GO:0018119: peptidyl-cysteine S-nitrosylation	1.40E-03
25	GO:0009773: photosynthetic electron transport in photosystem I	1.40E-03
26	GO:0019684: photosynthesis, light reaction	1.40E-03
27	GO:0009089: lysine biosynthetic process via diaminopimelate	1.40E-03
28	GO:1903507: negative regulation of nucleic acid-templated transcription	1.40E-03
29	GO:0006352: DNA-templated transcription, initiation	1.40E-03
30	GO:0006094: gluconeogenesis	1.67E-03
31	GO:0010628: positive regulation of gene expression	1.67E-03
32	GO:0010030: positive regulation of seed germination	1.95E-03
33	GO:0019853: L-ascorbic acid biosynthetic process	1.95E-03
34	GO:0006863: purine nucleobase transport	2.10E-03
35	GO:0006457: protein folding	2.19E-03
36	GO:0048511: rhythmic process	2.56E-03
37	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.72E-03
38	GO:0009411: response to UV	2.89E-03
39	GO:0006012: galactose metabolic process	2.89E-03
40	GO:0009306: protein secretion	3.05E-03
41	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.22E-03
42	GO:0000413: protein peptidyl-prolyl isomerization	3.40E-03
43	GO:0042631: cellular response to water deprivation	3.40E-03
44	GO:0007018: microtubule-based movement	3.76E-03
45	GO:0042752: regulation of circadian rhythm	3.76E-03
46	GO:0019252: starch biosynthetic process	3.94E-03
47	GO:0006635: fatty acid beta-oxidation	4.13E-03
48	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.19E-03
49	GO:0010027: thylakoid membrane organization	5.31E-03
50	GO:0001666: response to hypoxia	5.31E-03
51	GO:0016311: dephosphorylation	6.16E-03
52	GO:0005975: carbohydrate metabolic process	6.52E-03
53	GO:0009637: response to blue light	7.51E-03
54	GO:0010114: response to red light	8.96E-03
55	GO:0031347: regulation of defense response	1.02E-02
56	GO:0009664: plant-type cell wall organization	1.05E-02
57	GO:0006486: protein glycosylation	1.11E-02
58	GO:0006096: glycolytic process	1.24E-02
59	GO:0009451: RNA modification	2.12E-02
60	GO:0007166: cell surface receptor signaling pathway	2.30E-02
61	GO:0009658: chloroplast organization	2.85E-02
62	GO:0006810: transport	3.16E-02
63	GO:0044550: secondary metabolite biosynthetic process	3.53E-02
64	GO:0015979: photosynthesis	3.65E-02
65	GO:0007275: multicellular organism development	4.21E-02
66	GO:0032259: methylation	4.25E-02
67	GO:0006281: DNA repair	4.39E-02
68	GO:0007165: signal transduction	4.46E-02
69	GO:0009793: embryo development ending in seed dormancy	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
2	GO:0042623: ATPase activity, coupled	0.00E+00
3	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.10E-06
4	GO:0042736: NADH kinase activity	3.77E-05
5	GO:0046920: alpha-(1->3)-fucosyltransferase activity	3.77E-05
6	GO:0019156: isoamylase activity	9.40E-05
7	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	9.40E-05
8	GO:0004751: ribose-5-phosphate isomerase activity	1.63E-04
9	GO:0001053: plastid sigma factor activity	3.24E-04
10	GO:0016987: sigma factor activity	3.24E-04
11	GO:0004332: fructose-bisphosphate aldolase activity	5.07E-04
12	GO:0042578: phosphoric ester hydrolase activity	5.07E-04
13	GO:0004556: alpha-amylase activity	5.07E-04
14	GO:0003993: acid phosphatase activity	5.52E-04
15	GO:0008195: phosphatidate phosphatase activity	6.05E-04
16	GO:0004033: aldo-keto reductase (NADP) activity	8.13E-04
17	GO:0003951: NAD+ kinase activity	9.23E-04
18	GO:0008417: fucosyltransferase activity	1.04E-03
19	GO:0005528: FK506 binding	2.25E-03
20	GO:0003714: transcription corepressor activity	2.25E-03
21	GO:0043424: protein histidine kinase binding	2.40E-03
22	GO:0005345: purine nucleobase transmembrane transporter activity	2.40E-03
23	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	6.38E-03
24	GO:0004519: endonuclease activity	6.48E-03
25	GO:0005096: GTPase activator activity	6.60E-03
26	GO:0016887: ATPase activity	9.22E-03
27	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.11E-02
28	GO:0003777: microtubule motor activity	1.19E-02
29	GO:0031625: ubiquitin protein ligase binding	1.19E-02
30	GO:0016874: ligase activity	1.36E-02
31	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.99E-02
32	GO:0008017: microtubule binding	2.16E-02
33	GO:0008168: methyltransferase activity	2.78E-02
34	GO:0061630: ubiquitin protein ligase activity	3.45E-02
35	GO:0004871: signal transducer activity	3.91E-02
36	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.99E-02
37	GO:0004722: protein serine/threonine phosphatase activity	4.03E-02
38	GO:0005524: ATP binding	4.09E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009507: chloroplast	9.80E-08
3	GO:0009543: chloroplast thylakoid lumen	5.34E-06
4	GO:0009531: secondary cell wall	2.40E-04
5	GO:0031977: thylakoid lumen	6.25E-04
6	GO:0009533: chloroplast stromal thylakoid	7.07E-04
7	GO:0009535: chloroplast thylakoid membrane	2.22E-03
8	GO:0009654: photosystem II oxygen evolving complex	2.40E-03
9	GO:0005871: kinesin complex	3.22E-03
10	GO:0019898: extrinsic component of membrane	3.94E-03
11	GO:0032580: Golgi cisterna membrane	4.70E-03
12	GO:0005778: peroxisomal membrane	4.90E-03
13	GO:0009579: thylakoid	1.27E-02
14	GO:0005874: microtubule	3.24E-02
15	GO:0009570: chloroplast stroma	4.11E-02