co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G17100

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090470: shoot organ boundary specification	0.00E+00
2	GO:0046294: formaldehyde catabolic process	0.00E+00
3	GO:0010336: gibberellic acid homeostasis	0.00E+00
4	GO:0010423: negative regulation of brassinosteroid biosynthetic process	0.00E+00
5	GO:0046460: neutral lipid biosynthetic process	0.00E+00
6	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
7	GO:0036172: thiamine salvage	0.00E+00
8	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	0.00E+00
9	GO:0071244: cellular response to carbon dioxide	0.00E+00
10	GO:0018293: protein-FAD linkage	0.00E+00
11	GO:0034553: mitochondrial respiratory chain complex II assembly	0.00E+00
12	GO:0009902: chloroplast relocation	4.54E-05
13	GO:0006796: phosphate-containing compound metabolic process	1.05E-04
14	GO:0009903: chloroplast avoidance movement	1.45E-04
15	GO:0034972: histone H3-R26 methylation	2.57E-04
16	GO:0010036: response to boron-containing substance	2.57E-04
17	GO:1902265: abscisic acid homeostasis	2.57E-04
18	GO:0006007: glucose catabolic process	2.57E-04
19	GO:0034971: histone H3-R17 methylation	2.57E-04
20	GO:0048438: floral whorl development	2.57E-04
21	GO:0006835: dicarboxylic acid transport	2.57E-04
22	GO:0034970: histone H3-R2 methylation	2.57E-04
23	GO:0051603: proteolysis involved in cellular protein catabolic process	2.73E-04
24	GO:0022900: electron transport chain	2.98E-04
25	GO:0051453: regulation of intracellular pH	4.27E-04
26	GO:0016126: sterol biosynthetic process	4.74E-04
27	GO:0000103: sulfate assimilation	4.99E-04
28	GO:0019388: galactose catabolic process	5.68E-04
29	GO:0007154: cell communication	5.68E-04
30	GO:0010220: positive regulation of vernalization response	5.68E-04
31	GO:0019441: tryptophan catabolic process to kynurenine	5.68E-04
32	GO:0080183: response to photooxidative stress	5.68E-04
33	GO:0043100: pyrimidine nucleobase salvage	5.68E-04
34	GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	5.68E-04
35	GO:0010275: NAD(P)H dehydrogenase complex assembly	5.68E-04
36	GO:0019419: sulfate reduction	9.22E-04
37	GO:1901562: response to paraquat	9.22E-04
38	GO:0071492: cellular response to UV-A	9.22E-04
39	GO:0044375: regulation of peroxisome size	9.22E-04
40	GO:0031022: nuclear migration along microfilament	9.22E-04
41	GO:0009647: skotomorphogenesis	1.32E-03
42	GO:0009963: positive regulation of flavonoid biosynthetic process	1.32E-03
43	GO:0009590: detection of gravity	1.32E-03
44	GO:0046713: borate transport	1.32E-03
45	GO:0010371: regulation of gibberellin biosynthetic process	1.32E-03
46	GO:0006508: proteolysis	1.46E-03
47	GO:0071585: detoxification of cadmium ion	1.76E-03
48	GO:0009649: entrainment of circadian clock	1.76E-03
49	GO:0034613: cellular protein localization	1.76E-03
50	GO:0070534: protein K63-linked ubiquitination	1.76E-03
51	GO:0015743: malate transport	1.76E-03
52	GO:0071486: cellular response to high light intensity	1.76E-03
53	GO:0009765: photosynthesis, light harvesting	1.76E-03
54	GO:0016120: carotene biosynthetic process	2.25E-03
55	GO:0046283: anthocyanin-containing compound metabolic process	2.25E-03
56	GO:0009904: chloroplast accumulation movement	2.25E-03
57	GO:0010236: plastoquinone biosynthetic process	2.25E-03
58	GO:0009229: thiamine diphosphate biosynthetic process	2.25E-03
59	GO:0048317: seed morphogenesis	2.77E-03
60	GO:1902456: regulation of stomatal opening	2.77E-03
61	GO:0009228: thiamine biosynthetic process	2.77E-03
62	GO:0000060: protein import into nucleus, translocation	2.77E-03
63	GO:0009117: nucleotide metabolic process	2.77E-03
64	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	2.77E-03
65	GO:0006301: postreplication repair	2.77E-03
66	GO:0010304: PSII associated light-harvesting complex II catabolic process	2.77E-03
67	GO:0006555: methionine metabolic process	2.77E-03
68	GO:0070814: hydrogen sulfide biosynthetic process	2.77E-03
69	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.79E-03
70	GO:0080060: integument development	3.33E-03
71	GO:0034389: lipid particle organization	3.33E-03
72	GO:0010076: maintenance of floral meristem identity	3.33E-03
73	GO:0017148: negative regulation of translation	3.33E-03
74	GO:0010189: vitamin E biosynthetic process	3.33E-03
75	GO:0010077: maintenance of inflorescence meristem identity	3.33E-03
76	GO:0019509: L-methionine salvage from methylthioadenosine	3.33E-03
77	GO:0050790: regulation of catalytic activity	3.93E-03
78	GO:0045995: regulation of embryonic development	3.93E-03
79	GO:0005978: glycogen biosynthetic process	4.56E-03
80	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.56E-03
81	GO:0030091: protein repair	4.56E-03
82	GO:0030162: regulation of proteolysis	4.56E-03
83	GO:0009231: riboflavin biosynthetic process	4.56E-03
84	GO:0016559: peroxisome fission	4.56E-03
85	GO:0019430: removal of superoxide radicals	5.22E-03
86	GO:0015996: chlorophyll catabolic process	5.22E-03
87	GO:0009821: alkaloid biosynthetic process	5.92E-03
88	GO:0019432: triglyceride biosynthetic process	5.92E-03
89	GO:0046916: cellular transition metal ion homeostasis	5.92E-03
90	GO:0015780: nucleotide-sugar transport	5.92E-03
91	GO:0009098: leucine biosynthetic process	6.64E-03
92	GO:0009637: response to blue light	6.65E-03
93	GO:0006099: tricarboxylic acid cycle	6.96E-03
94	GO:0051555: flavonol biosynthetic process	7.40E-03
95	GO:0009970: cellular response to sulfate starvation	7.40E-03
96	GO:0045036: protein targeting to chloroplast	7.40E-03
97	GO:0009641: shade avoidance	7.40E-03
98	GO:0008285: negative regulation of cell proliferation	8.19E-03
99	GO:0018119: peptidyl-cysteine S-nitrosylation	8.19E-03
100	GO:0048229: gametophyte development	8.19E-03
101	GO:0009640: photomorphogenesis	8.59E-03
102	GO:0010582: floral meristem determinacy	9.00E-03
103	GO:0030048: actin filament-based movement	9.85E-03
104	GO:0006108: malate metabolic process	9.85E-03
105	GO:0006006: glucose metabolic process	9.85E-03
106	GO:0050826: response to freezing	9.85E-03
107	GO:0009718: anthocyanin-containing compound biosynthetic process	9.85E-03
108	GO:0009585: red, far-red light phototransduction	1.16E-02
109	GO:0007031: peroxisome organization	1.16E-02
110	GO:0006071: glycerol metabolic process	1.25E-02
111	GO:0080167: response to karrikin	1.28E-02
112	GO:0051017: actin filament bundle assembly	1.35E-02
113	GO:0019344: cysteine biosynthetic process	1.35E-02
114	GO:0008299: isoprenoid biosynthetic process	1.45E-02
115	GO:0006874: cellular calcium ion homeostasis	1.45E-02
116	GO:0010073: meristem maintenance	1.45E-02
117	GO:0019915: lipid storage	1.55E-02
118	GO:0055114: oxidation-reduction process	1.75E-02
119	GO:0009693: ethylene biosynthetic process	1.76E-02
120	GO:0010227: floral organ abscission	1.76E-02
121	GO:0006012: galactose metabolic process	1.76E-02
122	GO:0016117: carotenoid biosynthetic process	1.97E-02
123	GO:0042391: regulation of membrane potential	2.09E-02
124	GO:0080022: primary root development	2.09E-02
125	GO:0010118: stomatal movement	2.09E-02
126	GO:0009058: biosynthetic process	2.19E-02
127	GO:0006520: cellular amino acid metabolic process	2.20E-02
128	GO:0005975: carbohydrate metabolic process	2.25E-02
129	GO:0006814: sodium ion transport	2.32E-02
130	GO:0046686: response to cadmium ion	2.36E-02
131	GO:0019252: starch biosynthetic process	2.43E-02
132	GO:0019761: glucosinolate biosynthetic process	2.68E-02
133	GO:1901657: glycosyl compound metabolic process	2.80E-02
134	GO:0007623: circadian rhythm	2.87E-02
135	GO:0006464: cellular protein modification process	2.93E-02
136	GO:0010228: vegetative to reproductive phase transition of meristem	3.00E-02
137	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.20E-02
138	GO:0010029: regulation of seed germination	3.46E-02
139	GO:0042128: nitrate assimilation	3.59E-02
140	GO:0010411: xyloglucan metabolic process	3.73E-02
141	GO:0048573: photoperiodism, flowering	3.73E-02
142	GO:0000160: phosphorelay signal transduction system	4.16E-02
143	GO:0009407: toxin catabolic process	4.30E-02
144	GO:0010119: regulation of stomatal movement	4.45E-02
145	GO:0010043: response to zinc ion	4.45E-02
146	GO:0007568: aging	4.45E-02

Rank	GO Term	Adjusted P value
1	GO:0050486: intramolecular transferase activity, transferring hydroxy groups	0.00E+00
2	GO:0015205: nucleobase transmembrane transporter activity	0.00E+00
3	GO:0047504: (-)-menthol dehydrogenase activity	0.00E+00
4	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
5	GO:0017153: sodium:dicarboxylate symporter activity	0.00E+00
6	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
7	GO:0018738: S-formylglutathione hydrolase activity	0.00E+00
8	GO:0047501: (+)-neomenthol dehydrogenase activity	0.00E+00
9	GO:0004417: hydroxyethylthiazole kinase activity	0.00E+00
10	GO:0050342: tocopherol O-methyltransferase activity	0.00E+00
11	GO:0045436: lycopene beta cyclase activity	0.00E+00
12	GO:0000254: C-4 methylsterol oxidase activity	9.77E-08
13	GO:0004848: ureidoglycolate hydrolase activity	1.11E-05
14	GO:0008106: alcohol dehydrogenase (NADP+) activity	2.51E-05
15	GO:0004185: serine-type carboxypeptidase activity	1.55E-04
16	GO:0004427: inorganic diphosphatase activity	1.90E-04
17	GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	2.57E-04
18	GO:0010313: phytochrome binding	2.57E-04
19	GO:0080139: borate efflux transmembrane transporter activity	2.57E-04
20	GO:0016783: sulfurtransferase activity	2.57E-04
21	GO:0004328: formamidase activity	2.57E-04
22	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	2.57E-04
23	GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity	2.57E-04
24	GO:0016784: 3-mercaptopyruvate sulfurtransferase activity	2.57E-04
25	GO:0046480: galactolipid galactosyltransferase activity	2.57E-04
26	GO:0080079: cellobiose glucosidase activity	2.57E-04
27	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	5.68E-04
28	GO:0009973: adenylyl-sulfate reductase activity	5.68E-04
29	GO:0004046: aminoacylase activity	5.68E-04
30	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	5.68E-04
31	GO:0035241: protein-arginine omega-N monomethyltransferase activity	5.68E-04
32	GO:0004061: arylformamidase activity	5.68E-04
33	GO:0004614: phosphoglucomutase activity	5.68E-04
34	GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity	5.68E-04
35	GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity	5.68E-04
36	GO:0016868: intramolecular transferase activity, phosphotransferases	5.68E-04
37	GO:0043425: bHLH transcription factor binding	5.68E-04
38	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	5.68E-04
39	GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity	5.68E-04
40	GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	5.68E-04
41	GO:0050347: trans-octaprenyltranstransferase activity	5.68E-04
42	GO:0003861: 3-isopropylmalate dehydratase activity	9.22E-04
43	GO:0003935: GTP cyclohydrolase II activity	9.22E-04
44	GO:0004781: sulfate adenylyltransferase (ATP) activity	9.22E-04
45	GO:0008469: histone-arginine N-methyltransferase activity	9.22E-04
46	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	9.22E-04
47	GO:0010277: chlorophyllide a oxygenase [overall] activity	9.22E-04
48	GO:0048027: mRNA 5'-UTR binding	1.32E-03
49	GO:0035529: NADH pyrophosphatase activity	1.32E-03
50	GO:0004792: thiosulfate sulfurtransferase activity	1.32E-03
51	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.32E-03
52	GO:0046715: borate transmembrane transporter activity	1.32E-03
53	GO:0051537: 2 iron, 2 sulfur cluster binding	1.35E-03
54	GO:0016788: hydrolase activity, acting on ester bonds	2.08E-03
55	GO:0005452: inorganic anion exchanger activity	2.25E-03
56	GO:0008177: succinate dehydrogenase (ubiquinone) activity	2.25E-03
57	GO:0015301: anion:anion antiporter activity	2.25E-03
58	GO:0022857: transmembrane transporter activity	2.58E-03
59	GO:0004784: superoxide dismutase activity	2.77E-03
60	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	2.77E-03
61	GO:0016462: pyrophosphatase activity	2.77E-03
62	GO:0030060: L-malate dehydrogenase activity	3.33E-03
63	GO:0005261: cation channel activity	3.33E-03
64	GO:0004144: diacylglycerol O-acyltransferase activity	3.33E-03
65	GO:0015140: malate transmembrane transporter activity	3.93E-03
66	GO:0005338: nucleotide-sugar transmembrane transporter activity	3.93E-03
67	GO:0004034: aldose 1-epimerase activity	4.56E-03
68	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	4.56E-03
69	GO:0008236: serine-type peptidase activity	4.99E-03
70	GO:0046914: transition metal ion binding	5.22E-03
71	GO:0016844: strictosidine synthase activity	6.64E-03
72	GO:0004672: protein kinase activity	7.10E-03
73	GO:0042802: identical protein binding	7.58E-03
74	GO:0004860: protein kinase inhibitor activity	8.19E-03
75	GO:0046872: metal ion binding	8.47E-03
76	GO:0008378: galactosyltransferase activity	9.00E-03
77	GO:0046982: protein heterodimerization activity	9.51E-03
78	GO:0000287: magnesium ion binding	9.51E-03
79	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.85E-03
80	GO:0031072: heat shock protein binding	9.85E-03
81	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.07E-02
82	GO:0003712: transcription cofactor activity	1.16E-02
83	GO:0005217: intracellular ligand-gated ion channel activity	1.16E-02
84	GO:0004970: ionotropic glutamate receptor activity	1.16E-02
85	GO:0030552: cAMP binding	1.16E-02
86	GO:0030553: cGMP binding	1.16E-02
87	GO:0031625: ubiquitin protein ligase binding	1.29E-02
88	GO:0008234: cysteine-type peptidase activity	1.29E-02
89	GO:0045735: nutrient reservoir activity	1.37E-02
90	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.42E-02
91	GO:0005216: ion channel activity	1.45E-02
92	GO:0052689: carboxylic ester hydrolase activity	1.46E-02
93	GO:0004176: ATP-dependent peptidase activity	1.55E-02
94	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.55E-02
95	GO:0042803: protein homodimerization activity	1.71E-02
96	GO:0016491: oxidoreductase activity	1.77E-02
97	GO:0030551: cyclic nucleotide binding	2.09E-02
98	GO:0005249: voltage-gated potassium channel activity	2.09E-02
99	GO:0004402: histone acetyltransferase activity	2.09E-02
100	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.13E-02
101	GO:0008080: N-acetyltransferase activity	2.20E-02
102	GO:0009055: electron carrier activity	2.29E-02
103	GO:0016853: isomerase activity	2.32E-02
104	GO:0048038: quinone binding	2.56E-02
105	GO:0004518: nuclease activity	2.68E-02
106	GO:0004197: cysteine-type endopeptidase activity	2.68E-02
107	GO:0015297: antiporter activity	2.74E-02
108	GO:0000156: phosphorelay response regulator activity	2.80E-02
109	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.80E-02
110	GO:0008483: transaminase activity	3.06E-02
111	GO:0008237: metallopeptidase activity	3.06E-02
112	GO:0016413: O-acetyltransferase activity	3.19E-02
113	GO:0016168: chlorophyll binding	3.46E-02
114	GO:0030247: polysaccharide binding	3.73E-02
115	GO:0003824: catalytic activity	3.95E-02
116	GO:0015238: drug transmembrane transporter activity	4.16E-02
117	GO:0004222: metalloendopeptidase activity	4.30E-02
118	GO:0030145: manganese ion binding	4.45E-02
119	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0097708: intracellular vesicle	0.00E+00
2	GO:0009507: chloroplast	2.72E-06
3	GO:0005773: vacuole	1.01E-04
4	GO:0043674: columella	2.57E-04
5	GO:0000152: nuclear ubiquitin ligase complex	2.57E-04
6	GO:0005764: lysosome	8.40E-04
7	GO:0016328: lateral plasma membrane	9.22E-04
8	GO:0042646: plastid nucleoid	1.32E-03
9	GO:0009526: plastid envelope	1.76E-03
10	GO:0031372: UBC13-MMS2 complex	1.76E-03
11	GO:0009535: chloroplast thylakoid membrane	1.94E-03
12	GO:0031463: Cul3-RING ubiquitin ligase complex	2.77E-03
13	GO:0005623: cell	3.83E-03
14	GO:0031359: integral component of chloroplast outer membrane	3.93E-03
15	GO:0009536: plastid	4.99E-03
16	GO:0005779: integral component of peroxisomal membrane	5.22E-03
17	GO:0005811: lipid particle	5.22E-03
18	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	5.92E-03
19	GO:0042644: chloroplast nucleoid	5.92E-03
20	GO:0016604: nuclear body	6.64E-03
21	GO:0005829: cytosol	7.31E-03
22	GO:0005884: actin filament	8.19E-03
23	GO:0030659: cytoplasmic vesicle membrane	1.07E-02
24	GO:0009523: photosystem II	2.43E-02
25	GO:0005783: endoplasmic reticulum	2.70E-02
26	GO:0016021: integral component of membrane	2.88E-02
27	GO:0009295: nucleoid	3.06E-02
28	GO:0005778: peroxisomal membrane	3.06E-02
29	GO:0010319: stromule	3.06E-02
30	GO:0005886: plasma membrane	3.41E-02
31	GO:0009707: chloroplast outer membrane	4.01E-02
32	GO:0019005: SCF ubiquitin ligase complex	4.01E-02
33	GO:0009505: plant-type cell wall	4.77E-02
34	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.84E-02