GO Enrichment Analysis of Co-expressed Genes with
AT1G16880
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019279: L-methionine biosynthetic process from L-homoserine via cystathionine | 0.00E+00 |
| 2 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 3 | GO:0018316: peptide cross-linking via L-cystine | 0.00E+00 |
| 4 | GO:0048564: photosystem I assembly | 1.15E-05 |
| 5 | GO:0009098: leucine biosynthetic process | 2.32E-05 |
| 6 | GO:0009658: chloroplast organization | 2.33E-05 |
| 7 | GO:0071266: 'de novo' L-methionine biosynthetic process | 3.64E-05 |
| 8 | GO:0019346: transsulfuration | 3.64E-05 |
| 9 | GO:0019343: cysteine biosynthetic process via cystathionine | 3.64E-05 |
| 10 | GO:0071454: cellular response to anoxia | 3.64E-05 |
| 11 | GO:0071461: cellular response to redox state | 3.64E-05 |
| 12 | GO:0010362: negative regulation of anion channel activity by blue light | 3.64E-05 |
| 13 | GO:0010207: photosystem II assembly | 5.37E-05 |
| 14 | GO:0080005: photosystem stoichiometry adjustment | 9.09E-05 |
| 15 | GO:0080183: response to photooxidative stress | 9.09E-05 |
| 16 | GO:0016122: xanthophyll metabolic process | 9.09E-05 |
| 17 | GO:0080153: negative regulation of reductive pentose-phosphate cycle | 9.09E-05 |
| 18 | GO:0009150: purine ribonucleotide metabolic process | 1.58E-04 |
| 19 | GO:0006696: ergosterol biosynthetic process | 1.58E-04 |
| 20 | GO:0019761: glucosinolate biosynthetic process | 2.26E-04 |
| 21 | GO:2001141: regulation of RNA biosynthetic process | 2.33E-04 |
| 22 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.33E-04 |
| 23 | GO:0009902: chloroplast relocation | 3.14E-04 |
| 24 | GO:0010117: photoprotection | 4.01E-04 |
| 25 | GO:0010190: cytochrome b6f complex assembly | 4.92E-04 |
| 26 | GO:0050665: hydrogen peroxide biosynthetic process | 4.92E-04 |
| 27 | GO:0009854: oxidative photosynthetic carbon pathway | 5.88E-04 |
| 28 | GO:0010019: chloroplast-nucleus signaling pathway | 5.88E-04 |
| 29 | GO:0000105: histidine biosynthetic process | 7.90E-04 |
| 30 | GO:0071482: cellular response to light stimulus | 8.97E-04 |
| 31 | GO:0009638: phototropism | 1.12E-03 |
| 32 | GO:0009688: abscisic acid biosynthetic process | 1.24E-03 |
| 33 | GO:0045036: protein targeting to chloroplast | 1.24E-03 |
| 34 | GO:0043085: positive regulation of catalytic activity | 1.36E-03 |
| 35 | GO:0006352: DNA-templated transcription, initiation | 1.36E-03 |
| 36 | GO:0045037: protein import into chloroplast stroma | 1.49E-03 |
| 37 | GO:0006790: sulfur compound metabolic process | 1.49E-03 |
| 38 | GO:0009767: photosynthetic electron transport chain | 1.62E-03 |
| 39 | GO:0019253: reductive pentose-phosphate cycle | 1.76E-03 |
| 40 | GO:0034605: cellular response to heat | 1.76E-03 |
| 41 | GO:0090351: seedling development | 1.89E-03 |
| 42 | GO:0007017: microtubule-based process | 2.33E-03 |
| 43 | GO:0016226: iron-sulfur cluster assembly | 2.64E-03 |
| 44 | GO:0070417: cellular response to cold | 3.13E-03 |
| 45 | GO:0016117: carotenoid biosynthetic process | 3.13E-03 |
| 46 | GO:0010118: stomatal movement | 3.30E-03 |
| 47 | GO:0010197: polar nucleus fusion | 3.47E-03 |
| 48 | GO:0009791: post-embryonic development | 3.82E-03 |
| 49 | GO:0030163: protein catabolic process | 4.37E-03 |
| 50 | GO:0055114: oxidation-reduction process | 4.51E-03 |
| 51 | GO:0010286: heat acclimation | 4.75E-03 |
| 52 | GO:0010027: thylakoid membrane organization | 5.15E-03 |
| 53 | GO:0009816: defense response to bacterium, incompatible interaction | 5.35E-03 |
| 54 | GO:0015995: chlorophyll biosynthetic process | 5.76E-03 |
| 55 | GO:0006810: transport | 5.90E-03 |
| 56 | GO:0018298: protein-chromophore linkage | 6.18E-03 |
| 57 | GO:0000160: phosphorelay signal transduction system | 6.39E-03 |
| 58 | GO:0007568: aging | 6.83E-03 |
| 59 | GO:0009637: response to blue light | 7.28E-03 |
| 60 | GO:0009744: response to sucrose | 8.68E-03 |
| 61 | GO:0042538: hyperosmotic salinity response | 1.02E-02 |
| 62 | GO:0007623: circadian rhythm | 2.02E-02 |
| 63 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.09E-02 |
| 64 | GO:0042254: ribosome biogenesis | 2.80E-02 |
| 65 | GO:0046777: protein autophosphorylation | 3.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 2 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 3 | GO:0048038: quinone binding | 4.85E-06 |
| 4 | GO:0004121: cystathionine beta-lyase activity | 3.64E-05 |
| 5 | GO:0051996: squalene synthase activity | 3.64E-05 |
| 6 | GO:0003879: ATP phosphoribosyltransferase activity | 3.64E-05 |
| 7 | GO:0030941: chloroplast targeting sequence binding | 3.64E-05 |
| 8 | GO:0004123: cystathionine gamma-lyase activity | 3.64E-05 |
| 9 | GO:0046906: tetrapyrrole binding | 3.64E-05 |
| 10 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 9.09E-05 |
| 11 | GO:0003862: 3-isopropylmalate dehydrogenase activity | 9.09E-05 |
| 12 | GO:0032947: protein complex scaffold | 1.58E-04 |
| 13 | GO:0004848: ureidoglycolate hydrolase activity | 1.58E-04 |
| 14 | GO:0003861: 3-isopropylmalate dehydratase activity | 1.58E-04 |
| 15 | GO:0003962: cystathionine gamma-synthase activity | 1.58E-04 |
| 16 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 1.58E-04 |
| 17 | GO:0008430: selenium binding | 1.58E-04 |
| 18 | GO:0004180: carboxypeptidase activity | 1.58E-04 |
| 19 | GO:0010181: FMN binding | 1.82E-04 |
| 20 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 2.33E-04 |
| 21 | GO:0009882: blue light photoreceptor activity | 2.33E-04 |
| 22 | GO:0047627: adenylylsulfatase activity | 2.33E-04 |
| 23 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 2.33E-04 |
| 24 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 2.33E-04 |
| 25 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 3.14E-04 |
| 26 | GO:0008891: glycolate oxidase activity | 3.14E-04 |
| 27 | GO:0001053: plastid sigma factor activity | 3.14E-04 |
| 28 | GO:0016836: hydro-lyase activity | 3.14E-04 |
| 29 | GO:0051861: glycolipid binding | 3.14E-04 |
| 30 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.14E-04 |
| 31 | GO:0016987: sigma factor activity | 3.14E-04 |
| 32 | GO:0005506: iron ion binding | 6.04E-04 |
| 33 | GO:0019899: enzyme binding | 6.87E-04 |
| 34 | GO:0016491: oxidoreductase activity | 9.33E-04 |
| 35 | GO:0071949: FAD binding | 1.01E-03 |
| 36 | GO:0031072: heat shock protein binding | 1.62E-03 |
| 37 | GO:0000155: phosphorelay sensor kinase activity | 1.62E-03 |
| 38 | GO:0051536: iron-sulfur cluster binding | 2.18E-03 |
| 39 | GO:0000287: magnesium ion binding | 3.07E-03 |
| 40 | GO:0008236: serine-type peptidase activity | 5.97E-03 |
| 41 | GO:0005198: structural molecule activity | 9.42E-03 |
| 42 | GO:0051287: NAD binding | 9.93E-03 |
| 43 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.07E-02 |
| 44 | GO:0003777: microtubule motor activity | 1.15E-02 |
| 45 | GO:0005515: protein binding | 1.23E-02 |
| 46 | GO:0022857: transmembrane transporter activity | 1.32E-02 |
| 47 | GO:0051082: unfolded protein binding | 1.37E-02 |
| 48 | GO:0016746: transferase activity, transferring acyl groups | 1.40E-02 |
| 49 | GO:0030170: pyridoxal phosphate binding | 1.73E-02 |
| 50 | GO:0008565: protein transporter activity | 1.83E-02 |
| 51 | GO:0042802: identical protein binding | 2.40E-02 |
| 52 | GO:0008233: peptidase activity | 3.18E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.00E-15 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 5.63E-11 |
| 3 | GO:0009570: chloroplast stroma | 2.30E-06 |
| 4 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.88E-05 |
| 5 | GO:0009534: chloroplast thylakoid | 2.76E-04 |
| 6 | GO:0009517: PSII associated light-harvesting complex II | 3.14E-04 |
| 7 | GO:0030286: dynein complex | 3.14E-04 |
| 8 | GO:0031969: chloroplast membrane | 4.52E-04 |
| 9 | GO:0031359: integral component of chloroplast outer membrane | 6.87E-04 |
| 10 | GO:0043234: protein complex | 2.04E-03 |
| 11 | GO:0005875: microtubule associated complex | 2.04E-03 |
| 12 | GO:0009536: plastid | 4.69E-03 |
| 13 | GO:0009707: chloroplast outer membrane | 6.18E-03 |
| 14 | GO:0031966: mitochondrial membrane | 1.02E-02 |
| 15 | GO:0005777: peroxisome | 1.16E-02 |
| 16 | GO:0009706: chloroplast inner membrane | 1.37E-02 |
| 17 | GO:0010287: plastoglobule | 1.55E-02 |
| 18 | GO:0009543: chloroplast thylakoid lumen | 1.61E-02 |
| 19 | GO:0005623: cell | 1.64E-02 |
| 20 | GO:0009941: chloroplast envelope | 2.57E-02 |