co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G16830

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0039694: viral RNA genome replication	0.00E+00
2	GO:0006364: rRNA processing	9.16E-11
3	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	3.94E-06
4	GO:0000028: ribosomal small subunit assembly	7.39E-06
5	GO:0000469: cleavage involved in rRNA processing	2.76E-05
6	GO:0030490: maturation of SSU-rRNA	2.76E-05
7	GO:0043985: histone H4-R3 methylation	2.76E-05
8	GO:0009553: embryo sac development	4.92E-05
9	GO:0010501: RNA secondary structure unwinding	1.07E-04
10	GO:0045604: regulation of epidermal cell differentiation	1.23E-04
11	GO:0006479: protein methylation	2.48E-04
12	GO:0046345: abscisic acid catabolic process	2.48E-04
13	GO:0000741: karyogamy	3.92E-04
14	GO:0001731: formation of translation preinitiation complex	3.92E-04
15	GO:0048444: floral organ morphogenesis	4.69E-04
16	GO:0010077: maintenance of inflorescence meristem identity	4.69E-04
17	GO:0045995: regulation of embryonic development	5.49E-04
18	GO:0001522: pseudouridine synthesis	6.32E-04
19	GO:0019827: stem cell population maintenance	6.32E-04
20	GO:2000024: regulation of leaf development	8.07E-04
21	GO:0001708: cell fate specification	8.07E-04
22	GO:0006349: regulation of gene expression by genetic imprinting	8.99E-04
23	GO:0010582: floral meristem determinacy	1.19E-03
24	GO:0009790: embryo development	1.24E-03
25	GO:0006446: regulation of translational initiation	1.40E-03
26	GO:0009451: RNA modification	1.48E-03
27	GO:0010030: positive regulation of seed germination	1.50E-03
28	GO:0042254: ribosome biogenesis	2.26E-03
29	GO:0009561: megagametogenesis	2.35E-03
30	GO:0010305: leaf vascular tissue pattern formation	2.74E-03
31	GO:0010197: polar nucleus fusion	2.74E-03
32	GO:0009960: endosperm development	2.74E-03
33	GO:0048825: cotyledon development	3.02E-03
34	GO:0009926: auxin polar transport	6.82E-03
35	GO:0051301: cell division	7.76E-03
36	GO:0006417: regulation of translation	9.01E-03
37	GO:0006413: translational initiation	1.51E-02
38	GO:0007166: cell surface receptor signaling pathway	1.74E-02
39	GO:0007049: cell cycle	2.33E-02
40	GO:0045892: negative regulation of transcription, DNA-templated	2.89E-02
41	GO:0032259: methylation	3.22E-02
42	GO:0048364: root development	3.42E-02
43	GO:0009555: pollen development	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0000166: nucleotide binding	2.36E-10
2	GO:0003723: RNA binding	1.05E-05
3	GO:0001054: RNA polymerase I activity	2.22E-05
4	GO:0008026: ATP-dependent helicase activity	5.64E-05
5	GO:0070181: small ribosomal subunit rRNA binding	1.23E-04
6	GO:0048027: mRNA 5'-UTR binding	1.83E-04
7	GO:0004004: ATP-dependent RNA helicase activity	2.56E-04
8	GO:0030515: snoRNA binding	5.49E-04
9	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	6.17E-04
10	GO:0004521: endoribonuclease activity	1.19E-03
11	GO:0001056: RNA polymerase III activity	1.19E-03
12	GO:0008168: methyltransferase activity	2.14E-03
13	GO:0004519: endonuclease activity	4.38E-03
14	GO:0000987: core promoter proximal region sequence-specific DNA binding	5.91E-03
15	GO:0004386: helicase activity	1.14E-02
16	GO:0003743: translation initiation factor activity	1.77E-02

Rank	GO Term	Adjusted P value
1	GO:0034455: t-UTP complex	0.00E+00
2	GO:0030688: preribosome, small subunit precursor	0.00E+00
3	GO:0019034: viral replication complex	0.00E+00
4	GO:0005730: nucleolus	4.95E-11
5	GO:0005634: nucleus	5.44E-08
6	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.22E-07
7	GO:0005736: DNA-directed RNA polymerase I complex	1.22E-05
8	GO:0034388: Pwp2p-containing subcomplex of 90S preribosome	2.76E-05
9	GO:0016282: eukaryotic 43S preinitiation complex	3.92E-04
10	GO:0033290: eukaryotic 48S preinitiation complex	4.69E-04
11	GO:0005763: mitochondrial small ribosomal subunit	8.07E-04
12	GO:0005666: DNA-directed RNA polymerase III complex	8.99E-04
13	GO:0005852: eukaryotic translation initiation factor 3 complex	1.09E-03
14	GO:0032040: small-subunit processome	1.19E-03
15	GO:0043234: protein complex	1.62E-03
16	GO:0022627: cytosolic small ribosomal subunit	1.93E-02