co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G15810

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046294: formaldehyde catabolic process	0.00E+00
2	GO:0009106: lipoate metabolic process	0.00E+00
3	GO:0036172: thiamine salvage	0.00E+00
4	GO:0010423: negative regulation of brassinosteroid biosynthetic process	0.00E+00
5	GO:0071000: response to magnetism	0.00E+00
6	GO:0046460: neutral lipid biosynthetic process	0.00E+00
7	GO:0032928: regulation of superoxide anion generation	0.00E+00
8	GO:0018316: peptide cross-linking via L-cystine	0.00E+00
9	GO:0006907: pinocytosis	0.00E+00
10	GO:0009249: protein lipoylation	0.00E+00
11	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
12	GO:0009583: detection of light stimulus	0.00E+00
13	GO:0010275: NAD(P)H dehydrogenase complex assembly	1.70E-06
14	GO:0010117: photoprotection	4.30E-05
15	GO:0034971: histone H3-R17 methylation	1.88E-04
16	GO:0072387: flavin adenine dinucleotide metabolic process	1.88E-04
17	GO:0071454: cellular response to anoxia	1.88E-04
18	GO:0048438: floral whorl development	1.88E-04
19	GO:0022900: electron transport chain	1.88E-04
20	GO:0034970: histone H3-R2 methylation	1.88E-04
21	GO:0034972: histone H3-R26 methylation	1.88E-04
22	GO:0010617: circadian regulation of calcium ion oscillation	4.24E-04
23	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	4.24E-04
24	GO:0099402: plant organ development	4.24E-04
25	GO:0016122: xanthophyll metabolic process	4.24E-04
26	GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	4.24E-04
27	GO:0080153: negative regulation of reductive pentose-phosphate cycle	4.24E-04
28	GO:0010343: singlet oxygen-mediated programmed cell death	4.24E-04
29	GO:1901529: positive regulation of anion channel activity	4.24E-04
30	GO:0042276: error-prone translesion synthesis	6.92E-04
31	GO:1901672: positive regulation of systemic acquired resistance	6.92E-04
32	GO:0071492: cellular response to UV-A	6.92E-04
33	GO:0006275: regulation of DNA replication	6.92E-04
34	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	6.92E-04
35	GO:1902448: positive regulation of shade avoidance	6.92E-04
36	GO:0033014: tetrapyrrole biosynthetic process	9.86E-04
37	GO:1901332: negative regulation of lateral root development	9.86E-04
38	GO:1902347: response to strigolactone	1.31E-03
39	GO:0071486: cellular response to high light intensity	1.31E-03
40	GO:0071421: manganese ion transmembrane transport	1.31E-03
41	GO:0009765: photosynthesis, light harvesting	1.31E-03
42	GO:0009958: positive gravitropism	1.46E-03
43	GO:0006544: glycine metabolic process	1.66E-03
44	GO:0046283: anthocyanin-containing compound metabolic process	1.66E-03
45	GO:0009229: thiamine diphosphate biosynthetic process	1.66E-03
46	GO:0009107: lipoate biosynthetic process	1.66E-03
47	GO:0010438: cellular response to sulfur starvation	1.66E-03
48	GO:0010375: stomatal complex patterning	1.66E-03
49	GO:1901371: regulation of leaf morphogenesis	2.05E-03
50	GO:0000741: karyogamy	2.05E-03
51	GO:0009228: thiamine biosynthetic process	2.05E-03
52	GO:0060918: auxin transport	2.05E-03
53	GO:0042793: transcription from plastid promoter	2.05E-03
54	GO:0006574: valine catabolic process	2.05E-03
55	GO:0006563: L-serine metabolic process	2.05E-03
56	GO:0010304: PSII associated light-harvesting complex II catabolic process	2.05E-03
57	GO:0016070: RNA metabolic process	2.05E-03
58	GO:0031053: primary miRNA processing	2.05E-03
59	GO:0045962: positive regulation of development, heterochronic	2.05E-03
60	GO:0034389: lipid particle organization	2.46E-03
61	GO:0010076: maintenance of floral meristem identity	2.46E-03
62	GO:0017148: negative regulation of translation	2.46E-03
63	GO:0010019: chloroplast-nucleus signaling pathway	2.46E-03
64	GO:0010310: regulation of hydrogen peroxide metabolic process	2.46E-03
65	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.46E-03
66	GO:0016126: sterol biosynthetic process	2.58E-03
67	GO:0030026: cellular manganese ion homeostasis	2.90E-03
68	GO:0051510: regulation of unidimensional cell growth	2.90E-03
69	GO:0006880: intracellular sequestering of iron ion	2.90E-03
70	GO:0009451: RNA modification	3.25E-03
71	GO:0042255: ribosome assembly	3.36E-03
72	GO:0010439: regulation of glucosinolate biosynthetic process	3.36E-03
73	GO:0009704: de-etiolation	3.36E-03
74	GO:0045292: mRNA cis splicing, via spliceosome	3.36E-03
75	GO:0010928: regulation of auxin mediated signaling pathway	3.36E-03
76	GO:0019430: removal of superoxide radicals	3.84E-03
77	GO:0010100: negative regulation of photomorphogenesis	3.84E-03
78	GO:0032544: plastid translation	3.84E-03
79	GO:0019432: triglyceride biosynthetic process	4.35E-03
80	GO:0046916: cellular transition metal ion homeostasis	4.35E-03
81	GO:0006783: heme biosynthetic process	4.35E-03
82	GO:0015780: nucleotide-sugar transport	4.35E-03
83	GO:0098656: anion transmembrane transport	4.35E-03
84	GO:0009245: lipid A biosynthetic process	4.35E-03
85	GO:1900426: positive regulation of defense response to bacterium	4.87E-03
86	GO:0009638: phototropism	4.87E-03
87	GO:0006779: porphyrin-containing compound biosynthetic process	4.87E-03
88	GO:0035999: tetrahydrofolate interconversion	4.87E-03
89	GO:1900865: chloroplast RNA modification	4.87E-03
90	GO:0009688: abscisic acid biosynthetic process	5.42E-03
91	GO:0045036: protein targeting to chloroplast	5.42E-03
92	GO:0043085: positive regulation of catalytic activity	5.99E-03
93	GO:0009682: induced systemic resistance	5.99E-03
94	GO:0010582: floral meristem determinacy	6.58E-03
95	GO:0006260: DNA replication	6.63E-03
96	GO:0009785: blue light signaling pathway	7.19E-03
97	GO:0010075: regulation of meristem growth	7.19E-03
98	GO:0009767: photosynthetic electron transport chain	7.19E-03
99	GO:0019253: reductive pentose-phosphate cycle	7.82E-03
100	GO:0010207: photosystem II assembly	7.82E-03
101	GO:0009266: response to temperature stimulus	7.82E-03
102	GO:0034605: cellular response to heat	7.82E-03
103	GO:0010039: response to iron ion	8.47E-03
104	GO:0071732: cellular response to nitric oxide	8.47E-03
105	GO:0006071: glycerol metabolic process	9.14E-03
106	GO:0000162: tryptophan biosynthetic process	9.14E-03
107	GO:0006289: nucleotide-excision repair	9.83E-03
108	GO:2000377: regulation of reactive oxygen species metabolic process	9.83E-03
109	GO:0071369: cellular response to ethylene stimulus	1.28E-02
110	GO:0009625: response to insect	1.28E-02
111	GO:0070417: cellular response to cold	1.43E-02
112	GO:0010118: stomatal movement	1.51E-02
113	GO:0010197: polar nucleus fusion	1.60E-02
114	GO:0042752: regulation of circadian rhythm	1.68E-02
115	GO:0009646: response to absence of light	1.68E-02
116	GO:0009851: auxin biosynthetic process	1.77E-02
117	GO:0007623: circadian rhythm	1.83E-02
118	GO:0032502: developmental process	1.94E-02
119	GO:0007264: small GTPase mediated signal transduction	1.94E-02
120	GO:0071281: cellular response to iron ion	2.03E-02
121	GO:0000910: cytokinesis	2.31E-02
122	GO:0015995: chlorophyll biosynthetic process	2.71E-02
123	GO:0009658: chloroplast organization	2.83E-02
124	GO:0018298: protein-chromophore linkage	2.91E-02
125	GO:0000160: phosphorelay signal transduction system	3.02E-02
126	GO:0006811: ion transport	3.12E-02
127	GO:0010218: response to far red light	3.12E-02
128	GO:0006810: transport	3.13E-02
129	GO:0009910: negative regulation of flower development	3.23E-02
130	GO:0009637: response to blue light	3.45E-02
131	GO:0030001: metal ion transport	3.78E-02
132	GO:0006839: mitochondrial transport	3.78E-02
133	GO:0009640: photomorphogenesis	4.13E-02
134	GO:0010114: response to red light	4.13E-02
135	GO:0009744: response to sucrose	4.13E-02
136	GO:0008643: carbohydrate transport	4.36E-02
137	GO:0009644: response to high light intensity	4.36E-02
138	GO:0009965: leaf morphogenesis	4.48E-02
139	GO:0000165: MAPK cascade	4.73E-02
140	GO:0032259: methylation	4.93E-02
141	GO:0016042: lipid catabolic process	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0018738: S-formylglutathione hydrolase activity	0.00E+00
2	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
3	GO:0004417: hydroxyethylthiazole kinase activity	0.00E+00
4	GO:0033819: lipoyl(octanoyl) transferase activity	0.00E+00
5	GO:0004848: ureidoglycolate hydrolase activity	6.26E-06
6	GO:0004325: ferrochelatase activity	1.88E-04
7	GO:0046906: tetrapyrrole binding	1.88E-04
8	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.88E-04
9	GO:0030337: DNA polymerase processivity factor activity	1.88E-04
10	GO:0015929: hexosaminidase activity	4.24E-04
11	GO:0004563: beta-N-acetylhexosaminidase activity	4.24E-04
12	GO:0035241: protein-arginine omega-N monomethyltransferase activity	4.24E-04
13	GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity	4.24E-04
14	GO:0017118: lipoyltransferase activity	4.24E-04
15	GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity	4.24E-04
16	GO:0080045: quercetin 3'-O-glucosyltransferase activity	4.24E-04
17	GO:0016415: octanoyltransferase activity	4.24E-04
18	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	4.24E-04
19	GO:0019003: GDP binding	6.92E-04
20	GO:0000900: translation repressor activity, nucleic acid binding	6.92E-04
21	GO:0008469: histone-arginine N-methyltransferase activity	6.92E-04
22	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	6.92E-04
23	GO:0016851: magnesium chelatase activity	9.86E-04
24	GO:0000339: RNA cap binding	9.86E-04
25	GO:0009882: blue light photoreceptor activity	9.86E-04
26	GO:0043023: ribosomal large subunit binding	9.86E-04
27	GO:0000254: C-4 methylsterol oxidase activity	9.86E-04
28	GO:0004834: tryptophan synthase activity	1.31E-03
29	GO:0005319: lipid transporter activity	1.31E-03
30	GO:0004372: glycine hydroxymethyltransferase activity	1.66E-03
31	GO:0004518: nuclease activity	1.92E-03
32	GO:0004784: superoxide dismutase activity	2.05E-03
33	GO:0031177: phosphopantetheine binding	2.05E-03
34	GO:0080046: quercetin 4'-O-glucosyltransferase activity	2.05E-03
35	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.46E-03
36	GO:0000035: acyl binding	2.46E-03
37	GO:0004144: diacylglycerol O-acyltransferase activity	2.46E-03
38	GO:0019899: enzyme binding	2.90E-03
39	GO:0005338: nucleotide-sugar transmembrane transporter activity	2.90E-03
40	GO:0004525: ribonuclease III activity	3.36E-03
41	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	3.36E-03
42	GO:0008194: UDP-glycosyltransferase activity	3.64E-03
43	GO:0046914: transition metal ion binding	3.84E-03
44	GO:0071949: FAD binding	4.35E-03
45	GO:0005384: manganese ion transmembrane transporter activity	4.87E-03
46	GO:0005381: iron ion transmembrane transporter activity	4.87E-03
47	GO:0001055: RNA polymerase II activity	4.87E-03
48	GO:0008168: methyltransferase activity	5.24E-03
49	GO:0051537: 2 iron, 2 sulfur cluster binding	5.93E-03
50	GO:0004860: protein kinase inhibitor activity	5.99E-03
51	GO:0001054: RNA polymerase I activity	5.99E-03
52	GO:0001056: RNA polymerase III activity	6.58E-03
53	GO:0005315: inorganic phosphate transmembrane transporter activity	7.19E-03
54	GO:0031072: heat shock protein binding	7.19E-03
55	GO:0003887: DNA-directed DNA polymerase activity	9.14E-03
56	GO:0022857: transmembrane transporter activity	9.91E-03
57	GO:0004176: ATP-dependent peptidase activity	1.13E-02
58	GO:0035251: UDP-glucosyltransferase activity	1.13E-02
59	GO:0003723: RNA binding	1.24E-02
60	GO:0019843: rRNA binding	1.32E-02
61	GO:0004519: endonuclease activity	1.32E-02
62	GO:0003727: single-stranded RNA binding	1.35E-02
63	GO:0008514: organic anion transmembrane transporter activity	1.35E-02
64	GO:0008080: N-acetyltransferase activity	1.60E-02
65	GO:0048038: quinone binding	1.85E-02
66	GO:0000156: phosphorelay response regulator activity	2.03E-02
67	GO:0003824: catalytic activity	2.04E-02
68	GO:0008237: metallopeptidase activity	2.22E-02
69	GO:0016168: chlorophyll binding	2.51E-02
70	GO:0008375: acetylglucosaminyltransferase activity	2.61E-02
71	GO:0004806: triglyceride lipase activity	2.71E-02
72	GO:0046982: protein heterodimerization activity	2.77E-02
73	GO:0016788: hydrolase activity, acting on ester bonds	2.88E-02
74	GO:0004222: metalloendopeptidase activity	3.12E-02
75	GO:0003746: translation elongation factor activity	3.45E-02
76	GO:0003697: single-stranded DNA binding	3.45E-02
77	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.67E-02
78	GO:0051539: 4 iron, 4 sulfur cluster binding	3.78E-02
79	GO:0052689: carboxylic ester hydrolase activity	3.87E-02
80	GO:0004185: serine-type carboxypeptidase activity	4.13E-02
81	GO:0042803: protein homodimerization activity	4.38E-02
82	GO:0051287: NAD binding	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0030427: site of polarized growth	0.00E+00
2	GO:0009507: chloroplast	9.10E-14
3	GO:0009535: chloroplast thylakoid membrane	1.23E-07
4	GO:0043190: ATP-binding cassette (ABC) transporter complex	1.88E-04
5	GO:0005845: mRNA cap binding complex	1.88E-04
6	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.29E-04
7	GO:0009570: chloroplast stroma	4.17E-04
8	GO:0005846: nuclear cap binding complex	4.24E-04
9	GO:0016605: PML body	6.92E-04
10	GO:0042646: plastid nucleoid	9.86E-04
11	GO:0009517: PSII associated light-harvesting complex II	1.31E-03
12	GO:0031969: chloroplast membrane	1.41E-03
13	GO:0055035: plastid thylakoid membrane	1.66E-03
14	GO:0009536: plastid	2.04E-03
15	GO:0009295: nucleoid	2.30E-03
16	GO:0009840: chloroplastic endopeptidase Clp complex	2.46E-03
17	GO:0005811: lipid particle	3.84E-03
18	GO:0046930: pore complex	3.84E-03
19	GO:0042644: chloroplast nucleoid	4.35E-03
20	GO:0016604: nuclear body	4.87E-03
21	GO:0009508: plastid chromosome	7.19E-03
22	GO:0043234: protein complex	9.14E-03
23	GO:0000419: DNA-directed RNA polymerase V complex	9.14E-03
24	GO:0070469: respiratory chain	1.05E-02
25	GO:0009706: chloroplast inner membrane	1.05E-02
26	GO:0009941: chloroplast envelope	1.05E-02
27	GO:0009523: photosystem II	1.77E-02
28	GO:0009707: chloroplast outer membrane	2.91E-02
29	GO:0009579: thylakoid	3.06E-02
30	GO:0009534: chloroplast thylakoid	3.10E-02
31	GO:0005819: spindle	3.67E-02
32	GO:0005743: mitochondrial inner membrane	4.79E-02
33	GO:0031966: mitochondrial membrane	4.85E-02