co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G15790

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0001881: receptor recycling	0.00E+00
2	GO:0006592: ornithine biosynthetic process	0.00E+00
3	GO:0046890: regulation of lipid biosynthetic process	0.00E+00
4	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
5	GO:0010513: positive regulation of phosphatidylinositol biosynthetic process	0.00E+00
6	GO:0006721: terpenoid metabolic process	0.00E+00
7	GO:0008333: endosome to lysosome transport	1.13E-05
8	GO:0019509: L-methionine salvage from methylthioadenosine	1.47E-04
9	GO:0009751: response to salicylic acid	2.54E-04
10	GO:0044376: RNA polymerase II complex import to nucleus	2.60E-04
11	GO:0010265: SCF complex assembly	2.60E-04
12	GO:0006474: N-terminal protein amino acid acetylation	2.60E-04
13	GO:0016487: farnesol metabolic process	2.60E-04
14	GO:1990022: RNA polymerase III complex localization to nucleus	2.60E-04
15	GO:0006511: ubiquitin-dependent protein catabolic process	4.16E-04
16	GO:0080183: response to photooxidative stress	5.74E-04
17	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	5.74E-04
18	GO:0055088: lipid homeostasis	5.74E-04
19	GO:0006212: uracil catabolic process	5.74E-04
20	GO:0051788: response to misfolded protein	5.74E-04
21	GO:0019483: beta-alanine biosynthetic process	5.74E-04
22	GO:0016925: protein sumoylation	6.67E-04
23	GO:0006807: nitrogen compound metabolic process	7.57E-04
24	GO:0046417: chorismate metabolic process	9.31E-04
25	GO:0045793: positive regulation of cell size	9.31E-04
26	GO:0071494: cellular response to UV-C	9.31E-04
27	GO:0006629: lipid metabolic process	1.20E-03
28	GO:1901332: negative regulation of lateral root development	1.33E-03
29	GO:0006168: adenine salvage	1.33E-03
30	GO:1902290: positive regulation of defense response to oomycetes	1.33E-03
31	GO:0006882: cellular zinc ion homeostasis	1.33E-03
32	GO:0001676: long-chain fatty acid metabolic process	1.33E-03
33	GO:0032877: positive regulation of DNA endoreduplication	1.33E-03
34	GO:0006166: purine ribonucleoside salvage	1.33E-03
35	GO:0006107: oxaloacetate metabolic process	1.33E-03
36	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	1.33E-03
37	GO:0009647: skotomorphogenesis	1.33E-03
38	GO:0006164: purine nucleotide biosynthetic process	1.33E-03
39	GO:0009113: purine nucleobase biosynthetic process	1.33E-03
40	GO:0080142: regulation of salicylic acid biosynthetic process	1.78E-03
41	GO:0051781: positive regulation of cell division	1.78E-03
42	GO:0010387: COP9 signalosome assembly	1.78E-03
43	GO:0006621: protein retention in ER lumen	1.78E-03
44	GO:0071219: cellular response to molecule of bacterial origin	1.78E-03
45	GO:0051603: proteolysis involved in cellular protein catabolic process	1.89E-03
46	GO:0042147: retrograde transport, endosome to Golgi	1.97E-03
47	GO:0000413: protein peptidyl-prolyl isomerization	2.13E-03
48	GO:0044209: AMP salvage	2.27E-03
49	GO:0045116: protein neddylation	2.27E-03
50	GO:0036065: fucosylation	2.27E-03
51	GO:0009759: indole glucosinolate biosynthetic process	2.80E-03
52	GO:0006555: methionine metabolic process	2.80E-03
53	GO:0043248: proteasome assembly	2.80E-03
54	GO:0030163: protein catabolic process	3.22E-03
55	GO:0009554: megasporogenesis	3.36E-03
56	GO:1901001: negative regulation of response to salt stress	3.36E-03
57	GO:0009612: response to mechanical stimulus	3.36E-03
58	GO:0006914: autophagy	3.42E-03
59	GO:0045454: cell redox homeostasis	3.76E-03
60	GO:0010044: response to aluminum ion	3.97E-03
61	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.97E-03
62	GO:0048528: post-embryonic root development	3.97E-03
63	GO:0071446: cellular response to salicylic acid stimulus	3.97E-03
64	GO:1900056: negative regulation of leaf senescence	3.97E-03
65	GO:0000338: protein deneddylation	3.97E-03
66	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	3.97E-03
67	GO:0009615: response to virus	4.08E-03
68	GO:0009690: cytokinin metabolic process	4.60E-03
69	GO:0031540: regulation of anthocyanin biosynthetic process	4.60E-03
70	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.60E-03
71	GO:1900150: regulation of defense response to fungus	4.60E-03
72	GO:0006506: GPI anchor biosynthetic process	4.60E-03
73	GO:0006526: arginine biosynthetic process	5.27E-03
74	GO:0010204: defense response signaling pathway, resistance gene-independent	5.27E-03
75	GO:0043562: cellular response to nitrogen levels	5.27E-03
76	GO:0006002: fructose 6-phosphate metabolic process	5.27E-03
77	GO:0010120: camalexin biosynthetic process	5.27E-03
78	GO:0010112: regulation of systemic acquired resistance	5.98E-03
79	GO:0006189: 'de novo' IMP biosynthetic process	5.98E-03
80	GO:0046685: response to arsenic-containing substance	5.98E-03
81	GO:0009245: lipid A biosynthetic process	5.98E-03
82	GO:0009821: alkaloid biosynthetic process	5.98E-03
83	GO:0071577: zinc II ion transmembrane transport	6.71E-03
84	GO:1900426: positive regulation of defense response to bacterium	6.71E-03
85	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.71E-03
86	GO:0010449: root meristem growth	6.71E-03
87	GO:0009853: photorespiration	6.74E-03
88	GO:0006099: tricarboxylic acid cycle	7.05E-03
89	GO:0000103: sulfate assimilation	7.47E-03
90	GO:0043069: negative regulation of programmed cell death	7.47E-03
91	GO:0046686: response to cadmium ion	8.18E-03
92	GO:0048229: gametophyte development	8.27E-03
93	GO:0009073: aromatic amino acid family biosynthetic process	8.27E-03
94	GO:0009926: auxin polar transport	8.70E-03
95	GO:0051707: response to other organism	8.70E-03
96	GO:0006626: protein targeting to mitochondrion	9.94E-03
97	GO:0006108: malate metabolic process	9.94E-03
98	GO:2000028: regulation of photoperiodism, flowering	9.94E-03
99	GO:0031347: regulation of defense response	1.06E-02
100	GO:0002237: response to molecule of bacterial origin	1.08E-02
101	GO:0007034: vacuolar transport	1.08E-02
102	GO:0042742: defense response to bacterium	1.13E-02
103	GO:0071732: cellular response to nitric oxide	1.17E-02
104	GO:0010053: root epidermal cell differentiation	1.17E-02
105	GO:0009969: xyloglucan biosynthetic process	1.17E-02
106	GO:0006071: glycerol metabolic process	1.27E-02
107	GO:0006289: nucleotide-excision repair	1.36E-02
108	GO:0006487: protein N-linked glycosylation	1.36E-02
109	GO:0009116: nucleoside metabolic process	1.36E-02
110	GO:0009863: salicylic acid mediated signaling pathway	1.36E-02
111	GO:0009733: response to auxin	1.38E-02
112	GO:0009626: plant-type hypersensitive response	1.48E-02
113	GO:0009620: response to fungus	1.53E-02
114	GO:0007005: mitochondrion organization	1.67E-02
115	GO:0019748: secondary metabolic process	1.67E-02
116	GO:0015031: protein transport	1.71E-02
117	GO:0071369: cellular response to ethylene stimulus	1.77E-02
118	GO:0019722: calcium-mediated signaling	1.88E-02
119	GO:0034220: ion transmembrane transport	2.11E-02
120	GO:0010051: xylem and phloem pattern formation	2.11E-02
121	GO:0010118: stomatal movement	2.11E-02
122	GO:0006662: glycerol ether metabolic process	2.22E-02
123	GO:0009753: response to jasmonic acid	2.33E-02
124	GO:0009556: microsporogenesis	2.46E-02
125	GO:0006623: protein targeting to vacuole	2.46E-02
126	GO:0048825: cotyledon development	2.46E-02
127	GO:0080156: mitochondrial mRNA modification	2.58E-02
128	GO:0002229: defense response to oomycetes	2.58E-02
129	GO:0010193: response to ozone	2.58E-02
130	GO:0050832: defense response to fungus	2.80E-02
131	GO:0071281: cellular response to iron ion	2.83E-02
132	GO:0007623: circadian rhythm	2.90E-02
133	GO:0010228: vegetative to reproductive phase transition of meristem	3.04E-02
134	GO:0010286: heat acclimation	3.09E-02
135	GO:0000910: cytokinesis	3.22E-02
136	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.25E-02
137	GO:0009617: response to bacterium	3.46E-02
138	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.49E-02
139	GO:0009627: systemic acquired resistance	3.63E-02
140	GO:0006888: ER to Golgi vesicle-mediated transport	3.77E-02
141	GO:0006950: response to stress	3.77E-02
142	GO:0016049: cell growth	3.91E-02
143	GO:0009817: defense response to fungus, incompatible interaction	4.05E-02
144	GO:0009832: plant-type cell wall biogenesis	4.20E-02
145	GO:0010311: lateral root formation	4.20E-02
146	GO:0006499: N-terminal protein myristoylation	4.34E-02
147	GO:0045087: innate immune response	4.79E-02
148	GO:0034599: cellular response to oxidative stress	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0047886: farnesol dehydrogenase activity	0.00E+00
2	GO:0008777: acetylornithine deacetylase activity	0.00E+00
3	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
4	GO:0046522: S-methyl-5-thioribose kinase activity	0.00E+00
5	GO:0016881: acid-amino acid ligase activity	0.00E+00
6	GO:0003837: beta-ureidopropionase activity	0.00E+00
7	GO:0050152: omega-amidase activity	0.00E+00
8	GO:0004637: phosphoribosylamine-glycine ligase activity	0.00E+00
9	GO:0005212: structural constituent of eye lens	0.00E+00
10	GO:0004298: threonine-type endopeptidase activity	8.08E-08
11	GO:0008233: peptidase activity	1.23E-05
12	GO:0031386: protein tag	7.32E-05
13	GO:0019786: Atg8-specific protease activity	2.60E-04
14	GO:0008517: folic acid transporter activity	5.74E-04
15	GO:0004776: succinate-CoA ligase (GDP-forming) activity	5.74E-04
16	GO:0004596: peptide alpha-N-acetyltransferase activity	5.74E-04
17	GO:0010297: heteropolysaccharide binding	5.74E-04
18	GO:0019781: NEDD8 activating enzyme activity	5.74E-04
19	GO:0008805: carbon-monoxide oxygenase activity	5.74E-04
20	GO:0004775: succinate-CoA ligase (ADP-forming) activity	5.74E-04
21	GO:0018708: thiol S-methyltransferase activity	5.74E-04
22	GO:0019779: Atg8 activating enzyme activity	5.74E-04
23	GO:0004106: chorismate mutase activity	5.74E-04
24	GO:0052692: raffinose alpha-galactosidase activity	9.31E-04
25	GO:0008430: selenium binding	9.31E-04
26	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	9.31E-04
27	GO:0004557: alpha-galactosidase activity	9.31E-04
28	GO:0035529: NADH pyrophosphatase activity	1.33E-03
29	GO:0003999: adenine phosphoribosyltransferase activity	1.33E-03
30	GO:0004576: oligosaccharyl transferase activity	1.78E-03
31	GO:0019776: Atg8 ligase activity	1.78E-03
32	GO:0010011: auxin binding	1.78E-03
33	GO:0046923: ER retention sequence binding	1.78E-03
34	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.78E-03
35	GO:0070628: proteasome binding	1.78E-03
36	GO:0047631: ADP-ribose diphosphatase activity	2.27E-03
37	GO:0008641: small protein activating enzyme activity	2.27E-03
38	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.27E-03
39	GO:0004040: amidase activity	2.27E-03
40	GO:0004872: receptor activity	2.64E-03
41	GO:0031593: polyubiquitin binding	2.80E-03
42	GO:0000210: NAD+ diphosphatase activity	2.80E-03
43	GO:0031177: phosphopantetheine binding	2.80E-03
44	GO:0015035: protein disulfide oxidoreductase activity	2.94E-03
45	GO:0000035: acyl binding	3.36E-03
46	GO:0004602: glutathione peroxidase activity	3.36E-03
47	GO:0004656: procollagen-proline 4-dioxygenase activity	3.36E-03
48	GO:0051920: peroxiredoxin activity	3.36E-03
49	GO:0102391: decanoate--CoA ligase activity	3.36E-03
50	GO:0004467: long-chain fatty acid-CoA ligase activity	3.97E-03
51	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	3.97E-03
52	GO:0042162: telomeric DNA binding	3.97E-03
53	GO:0008121: ubiquinol-cytochrome-c reductase activity	3.97E-03
54	GO:0003872: 6-phosphofructokinase activity	3.97E-03
55	GO:0004722: protein serine/threonine phosphatase activity	4.33E-03
56	GO:0016209: antioxidant activity	4.60E-03
57	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	4.60E-03
58	GO:0008417: fucosyltransferase activity	5.98E-03
59	GO:0008889: glycerophosphodiester phosphodiesterase activity	5.98E-03
60	GO:0016844: strictosidine synthase activity	6.71E-03
61	GO:0003697: single-stranded DNA binding	6.74E-03
62	GO:0008327: methyl-CpG binding	8.27E-03
63	GO:0008559: xenobiotic-transporting ATPase activity	8.27E-03
64	GO:0047372: acylglycerol lipase activity	8.27E-03
65	GO:0004129: cytochrome-c oxidase activity	8.27E-03
66	GO:0008794: arsenate reductase (glutaredoxin) activity	8.27E-03
67	GO:0004521: endoribonuclease activity	9.09E-03
68	GO:0004089: carbonate dehydratase activity	9.94E-03
69	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.94E-03
70	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.02E-02
71	GO:0031418: L-ascorbic acid binding	1.36E-02
72	GO:0005385: zinc ion transmembrane transporter activity	1.36E-02
73	GO:0043130: ubiquitin binding	1.36E-02
74	GO:0043424: protein histidine kinase binding	1.46E-02
75	GO:0016787: hydrolase activity	1.51E-02
76	GO:0046872: metal ion binding	1.70E-02
77	GO:0047134: protein-disulfide reductase activity	1.99E-02
78	GO:0046873: metal ion transmembrane transporter activity	2.22E-02
79	GO:0008080: N-acetyltransferase activity	2.22E-02
80	GO:0001085: RNA polymerase II transcription factor binding	2.22E-02
81	GO:0050662: coenzyme binding	2.34E-02
82	GO:0004791: thioredoxin-disulfide reductase activity	2.34E-02
83	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.83E-02
84	GO:0003684: damaged DNA binding	2.96E-02
85	GO:0008237: metallopeptidase activity	3.09E-02
86	GO:0015250: water channel activity	3.35E-02
87	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.69E-02
88	GO:0004806: triglyceride lipase activity	3.77E-02
89	GO:0030247: polysaccharide binding	3.77E-02
90	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.05E-02
91	GO:0008168: methyltransferase activity	4.31E-02
92	GO:0004222: metalloendopeptidase activity	4.34E-02
93	GO:0004601: peroxidase activity	4.48E-02
94	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.49E-02
95	GO:0050897: cobalt ion binding	4.49E-02
96	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.79E-02
97	GO:0003746: translation elongation factor activity	4.79E-02
98	GO:0003993: acid phosphatase activity	4.94E-02
99	GO:0005515: protein binding	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0031417: NatC complex	0.00E+00
2	GO:0000502: proteasome complex	2.19E-09
3	GO:0005839: proteasome core complex	8.08E-08
4	GO:0005794: Golgi apparatus	1.02E-05
5	GO:0005776: autophagosome	4.61E-05
6	GO:0005771: multivesicular body	1.07E-04
7	GO:0030904: retromer complex	1.07E-04
8	GO:0005829: cytosol	2.75E-04
9	GO:0019773: proteasome core complex, alpha-subunit complex	3.02E-04
10	GO:0005783: endoplasmic reticulum	3.09E-04
11	GO:0005697: telomerase holoenzyme complex	5.74E-04
12	GO:0005750: mitochondrial respiratory chain complex III	8.52E-04
13	GO:0046861: glyoxysomal membrane	9.31E-04
14	GO:0045271: respiratory chain complex I	1.28E-03
15	GO:0005775: vacuolar lumen	1.33E-03
16	GO:0031410: cytoplasmic vesicle	1.54E-03
17	GO:0005774: vacuolar membrane	2.06E-03
18	GO:0005945: 6-phosphofructokinase complex	2.27E-03
19	GO:0008250: oligosaccharyltransferase complex	2.27E-03
20	GO:0005773: vacuole	2.40E-03
21	GO:0045273: respiratory chain complex II	4.60E-03
22	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	4.60E-03
23	GO:0000421: autophagosome membrane	4.60E-03
24	GO:0009514: glyoxysome	5.27E-03
25	GO:0031090: organelle membrane	5.98E-03
26	GO:0008180: COP9 signalosome	5.98E-03
27	GO:0000325: plant-type vacuole	6.15E-03
28	GO:0005789: endoplasmic reticulum membrane	7.88E-03
29	GO:0031902: late endosome membrane	8.02E-03
30	GO:0008541: proteasome regulatory particle, lid subcomplex	8.27E-03
31	GO:0005665: DNA-directed RNA polymerase II, core complex	9.09E-03
32	GO:0009508: plastid chromosome	9.94E-03
33	GO:0031966: mitochondrial membrane	1.09E-02
34	GO:0005753: mitochondrial proton-transporting ATP synthase complex	1.17E-02
35	GO:0000419: DNA-directed RNA polymerase V complex	1.27E-02
36	GO:0005769: early endosome	1.27E-02
37	GO:0005758: mitochondrial intermembrane space	1.36E-02
38	GO:0005747: mitochondrial respiratory chain complex I	1.44E-02
39	GO:0070469: respiratory chain	1.46E-02
40	GO:0005732: small nucleolar ribonucleoprotein complex	1.83E-02
41	GO:0005886: plasma membrane	2.37E-02
42	GO:0005802: trans-Golgi network	2.50E-02
43	GO:0032580: Golgi cisterna membrane	2.96E-02
44	GO:0009295: nucleoid	3.09E-02
45	GO:0005788: endoplasmic reticulum lumen	3.49E-02
46	GO:0005667: transcription factor complex	3.63E-02
47	GO:0022626: cytosolic ribosome	4.12E-02
48	GO:0015934: large ribosomal subunit	4.49E-02