Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G15420

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019481: L-alanine catabolic process, by transamination0.00E+00
2GO:0009560: embryo sac egg cell differentiation0.00E+00
3GO:0009966: regulation of signal transduction2.76E-05
4GO:0010372: positive regulation of gibberellin biosynthetic process7.01E-05
5GO:0006611: protein export from nucleus7.01E-05
6GO:0070475: rRNA base methylation1.23E-04
7GO:0000055: ribosomal large subunit export from nucleus1.23E-04
8GO:0010366: negative regulation of ethylene biosynthetic process1.23E-04
9GO:0001709: cell fate determination2.48E-04
10GO:0033320: UDP-D-xylose biosynthetic process2.48E-04
11GO:0007029: endoplasmic reticulum organization3.18E-04
12GO:0001731: formation of translation preinitiation complex3.92E-04
13GO:0016070: RNA metabolic process3.92E-04
14GO:0000470: maturation of LSU-rRNA3.92E-04
15GO:0042732: D-xylose metabolic process3.92E-04
16GO:0006402: mRNA catabolic process6.32E-04
17GO:0006605: protein targeting6.32E-04
18GO:0048658: anther wall tapetum development6.32E-04
19GO:0046686: response to cadmium ion7.04E-04
20GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay8.07E-04
21GO:0010015: root morphogenesis1.09E-03
22GO:0010105: negative regulation of ethylene-activated signaling pathway1.19E-03
23GO:0006413: translational initiation1.36E-03
24GO:0006446: regulation of translational initiation1.40E-03
25GO:0034605: cellular response to heat1.40E-03
26GO:0009225: nucleotide-sugar metabolic process1.50E-03
27GO:0030150: protein import into mitochondrial matrix1.73E-03
28GO:0043622: cortical microtubule organization1.85E-03
29GO:0030433: ubiquitin-dependent ERAD pathway2.09E-03
30GO:0031348: negative regulation of defense response2.09E-03
31GO:0009686: gibberellin biosynthetic process2.22E-03
32GO:0009306: protein secretion2.35E-03
33GO:0010501: RNA secondary structure unwinding2.61E-03
34GO:0031047: gene silencing by RNA3.31E-03
35GO:0010090: trichome morphogenesis3.45E-03
36GO:0007267: cell-cell signaling3.75E-03
37GO:0001666: response to hypoxia4.06E-03
38GO:0009615: response to virus4.06E-03
39GO:0006397: mRNA processing4.20E-03
40GO:0010311: lateral root formation5.04E-03
41GO:0009834: plant-type secondary cell wall biogenesis5.21E-03
42GO:0008283: cell proliferation6.82E-03
43GO:0009965: leaf morphogenesis7.40E-03
44GO:0006417: regulation of translation9.01E-03
45GO:0006457: protein folding9.22E-03
46GO:0043086: negative regulation of catalytic activity9.44E-03
47GO:0016567: protein ubiquitination9.51E-03
48GO:0006511: ubiquitin-dependent protein catabolic process9.68E-03
49GO:0009553: embryo sac development1.05E-02
50GO:0009742: brassinosteroid mediated signaling pathway1.12E-02
51GO:0000398: mRNA splicing, via spliceosome1.19E-02
52GO:0009845: seed germination1.33E-02
53GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.71E-02
54GO:0007166: cell surface receptor signaling pathway1.74E-02
55GO:0009723: response to ethylene2.39E-02
56GO:0080167: response to karrikin2.51E-02
57GO:0010200: response to chitin2.58E-02
58GO:0006886: intracellular protein transport2.92E-02
59GO:0009408: response to heat3.32E-02
60GO:0009873: ethylene-activated signaling pathway3.98E-02
61GO:0006357: regulation of transcription from RNA polymerase II promoter4.05E-02
62GO:0009555: pollen development4.99E-02
RankGO TermAdjusted P value
1GO:0030621: U4 snRNA binding0.00E+00
2GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity2.76E-05
3GO:0017151: DEAD/H-box RNA helicase binding2.76E-05
4GO:0043141: ATP-dependent 5'-3' DNA helicase activity7.01E-05
5GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.83E-04
6GO:0043023: ribosomal large subunit binding1.83E-04
7GO:0002020: protease binding3.18E-04
8GO:0017070: U6 snRNA binding3.18E-04
9GO:0048040: UDP-glucuronate decarboxylase activity3.92E-04
10GO:0070403: NAD+ binding4.69E-04
11GO:0008143: poly(A) binding5.49E-04
12GO:0003678: DNA helicase activity8.07E-04
13GO:0019888: protein phosphatase regulator activity1.29E-03
14GO:0003743: translation initiation factor activity1.69E-03
15GO:0003723: RNA binding1.93E-03
16GO:0018024: histone-lysine N-methyltransferase activity2.48E-03
17GO:0004518: nuclease activity3.31E-03
18GO:0003729: mRNA binding3.84E-03
19GO:0004004: ATP-dependent RNA helicase activity4.54E-03
20GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.87E-03
21GO:0000166: nucleotide binding7.12E-03
22GO:0031625: ubiquitin protein ligase binding9.01E-03
23GO:0008026: ATP-dependent helicase activity1.12E-02
24GO:0046910: pectinesterase inhibitor activity1.51E-02
25GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.51E-02
26GO:0046982: protein heterodimerization activity2.13E-02
27GO:0003682: chromatin binding2.24E-02
28GO:0061630: ubiquitin protein ligase activity2.61E-02
29GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.86E-02
30GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.09E-02
RankGO TermAdjusted P value
1GO:0010494: cytoplasmic stress granule1.22E-05
2GO:0016442: RISC complex2.76E-05
3GO:0030688: preribosome, small subunit precursor2.76E-05
4GO:0016282: eukaryotic 43S preinitiation complex3.92E-04
5GO:0016363: nuclear matrix4.69E-04
6GO:0033290: eukaryotic 48S preinitiation complex4.69E-04
7GO:0046540: U4/U6 x U5 tri-snRNP complex7.18E-04
8GO:0005730: nucleolus7.98E-04
9GO:0005852: eukaryotic translation initiation factor 3 complex1.09E-03
10GO:0048471: perinuclear region of cytoplasm1.09E-03
11GO:0005744: mitochondrial inner membrane presequence translocase complex2.35E-03
12GO:0005829: cytosol2.81E-03
13GO:0005694: chromosome3.31E-03
14GO:0032580: Golgi cisterna membrane3.60E-03
15GO:0000932: P-body4.06E-03
16GO:0019005: SCF ubiquitin ligase complex4.87E-03
17GO:0000786: nucleosome5.55E-03
18GO:0005635: nuclear envelope8.81E-03
19GO:0005681: spliceosomal complex9.44E-03
20GO:0016607: nuclear speck9.65E-03
21GO:0005774: vacuolar membrane1.12E-02
22GO:0009506: plasmodesma1.78E-02
23GO:0080008: Cul4-RING E3 ubiquitin ligase complex2.30E-02
24GO:0005743: mitochondrial inner membrane3.15E-02
25GO:0022626: cytosolic ribosome4.84E-02
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Gene type



Gene DE type