GO Enrichment Analysis of Co-expressed Genes with
AT1G15180
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009715: chalcone biosynthetic process | 0.00E+00 |
| 2 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 3 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 4 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 5 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 6 | GO:0009645: response to low light intensity stimulus | 9.02E-08 |
| 7 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.31E-06 |
| 8 | GO:0009769: photosynthesis, light harvesting in photosystem II | 1.82E-05 |
| 9 | GO:0018298: protein-chromophore linkage | 3.79E-05 |
| 10 | GO:0009637: response to blue light | 5.50E-05 |
| 11 | GO:0006419: alanyl-tRNA aminoacylation | 5.79E-05 |
| 12 | GO:0046520: sphingoid biosynthetic process | 5.79E-05 |
| 13 | GO:0046167: glycerol-3-phosphate biosynthetic process | 5.79E-05 |
| 14 | GO:0006790: sulfur compound metabolic process | 7.94E-05 |
| 15 | GO:0010114: response to red light | 8.09E-05 |
| 16 | GO:0009644: response to high light intensity | 9.08E-05 |
| 17 | GO:0046854: phosphatidylinositol phosphorylation | 1.20E-04 |
| 18 | GO:0006833: water transport | 1.35E-04 |
| 19 | GO:0015979: photosynthesis | 1.38E-04 |
| 20 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.41E-04 |
| 21 | GO:0006650: glycerophospholipid metabolic process | 1.41E-04 |
| 22 | GO:0009629: response to gravity | 1.41E-04 |
| 23 | GO:0010042: response to manganese ion | 1.41E-04 |
| 24 | GO:0000256: allantoin catabolic process | 1.41E-04 |
| 25 | GO:0009269: response to desiccation | 1.87E-04 |
| 26 | GO:0046168: glycerol-3-phosphate catabolic process | 2.40E-04 |
| 27 | GO:0090391: granum assembly | 2.40E-04 |
| 28 | GO:0010136: ureide catabolic process | 2.40E-04 |
| 29 | GO:0034220: ion transmembrane transport | 2.90E-04 |
| 30 | GO:0006072: glycerol-3-phosphate metabolic process | 3.49E-04 |
| 31 | GO:0006145: purine nucleobase catabolic process | 3.49E-04 |
| 32 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 3.49E-04 |
| 33 | GO:2001141: regulation of RNA biosynthetic process | 3.49E-04 |
| 34 | GO:0009765: photosynthesis, light harvesting | 4.66E-04 |
| 35 | GO:0006546: glycine catabolic process | 4.66E-04 |
| 36 | GO:0006021: inositol biosynthetic process | 4.66E-04 |
| 37 | GO:0010027: thylakoid membrane organization | 5.54E-04 |
| 38 | GO:0010236: plastoquinone biosynthetic process | 5.92E-04 |
| 39 | GO:0016311: dephosphorylation | 6.82E-04 |
| 40 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 7.24E-04 |
| 41 | GO:0046855: inositol phosphate dephosphorylation | 7.24E-04 |
| 42 | GO:0009117: nucleotide metabolic process | 7.24E-04 |
| 43 | GO:0010218: response to far red light | 7.87E-04 |
| 44 | GO:0010189: vitamin E biosynthetic process | 8.63E-04 |
| 45 | GO:0010196: nonphotochemical quenching | 1.01E-03 |
| 46 | GO:0030026: cellular manganese ion homeostasis | 1.01E-03 |
| 47 | GO:0006400: tRNA modification | 1.01E-03 |
| 48 | GO:0031540: regulation of anthocyanin biosynthetic process | 1.16E-03 |
| 49 | GO:0017004: cytochrome complex assembly | 1.32E-03 |
| 50 | GO:0071482: cellular response to light stimulus | 1.32E-03 |
| 51 | GO:0010206: photosystem II repair | 1.48E-03 |
| 52 | GO:0006754: ATP biosynthetic process | 1.48E-03 |
| 53 | GO:0072593: reactive oxygen species metabolic process | 2.02E-03 |
| 54 | GO:0006352: DNA-templated transcription, initiation | 2.02E-03 |
| 55 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.02E-03 |
| 56 | GO:0005983: starch catabolic process | 2.21E-03 |
| 57 | GO:0006006: glucose metabolic process | 2.41E-03 |
| 58 | GO:0009409: response to cold | 2.43E-03 |
| 59 | GO:0019253: reductive pentose-phosphate cycle | 2.62E-03 |
| 60 | GO:0010207: photosystem II assembly | 2.62E-03 |
| 61 | GO:0046688: response to copper ion | 2.82E-03 |
| 62 | GO:0019853: L-ascorbic acid biosynthetic process | 2.82E-03 |
| 63 | GO:0008299: isoprenoid biosynthetic process | 3.49E-03 |
| 64 | GO:0019748: secondary metabolic process | 3.95E-03 |
| 65 | GO:0006457: protein folding | 4.42E-03 |
| 66 | GO:0009561: megagametogenesis | 4.44E-03 |
| 67 | GO:0000413: protein peptidyl-prolyl isomerization | 4.95E-03 |
| 68 | GO:0009658: chloroplast organization | 5.66E-03 |
| 69 | GO:0055072: iron ion homeostasis | 5.75E-03 |
| 70 | GO:0008654: phospholipid biosynthetic process | 5.75E-03 |
| 71 | GO:0042254: ribosome biogenesis | 5.77E-03 |
| 72 | GO:0071554: cell wall organization or biogenesis | 6.02E-03 |
| 73 | GO:0080167: response to karrikin | 7.02E-03 |
| 74 | GO:0042128: nitrate assimilation | 8.40E-03 |
| 75 | GO:0009813: flavonoid biosynthetic process | 9.69E-03 |
| 76 | GO:0009753: response to jasmonic acid | 1.11E-02 |
| 77 | GO:0006810: transport | 1.27E-02 |
| 78 | GO:0009640: photomorphogenesis | 1.32E-02 |
| 79 | GO:0009926: auxin polar transport | 1.32E-02 |
| 80 | GO:0006812: cation transport | 1.55E-02 |
| 81 | GO:0006364: rRNA processing | 1.63E-02 |
| 82 | GO:0010224: response to UV-B | 1.67E-02 |
| 83 | GO:0055114: oxidation-reduction process | 1.71E-02 |
| 84 | GO:0006857: oligopeptide transport | 1.71E-02 |
| 85 | GO:0006096: glycolytic process | 1.84E-02 |
| 86 | GO:0009416: response to light stimulus | 1.85E-02 |
| 87 | GO:0009611: response to wounding | 1.89E-02 |
| 88 | GO:0055085: transmembrane transport | 2.34E-02 |
| 89 | GO:0010150: leaf senescence | 3.09E-02 |
| 90 | GO:0006470: protein dephosphorylation | 3.40E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 2 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 3 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 4 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 5 | GO:0016210: naringenin-chalcone synthase activity | 0.00E+00 |
| 6 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 7 | GO:0010486: manganese:proton antiporter activity | 0.00E+00 |
| 8 | GO:0046872: metal ion binding | 2.12E-07 |
| 9 | GO:0031072: heat shock protein binding | 1.21E-06 |
| 10 | GO:0031409: pigment binding | 2.29E-06 |
| 11 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.32E-05 |
| 12 | GO:0016168: chlorophyll binding | 2.71E-05 |
| 13 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 5.79E-05 |
| 14 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 5.79E-05 |
| 15 | GO:0000170: sphingosine hydroxylase activity | 5.79E-05 |
| 16 | GO:0050308: sugar-phosphatase activity | 5.79E-05 |
| 17 | GO:0004813: alanine-tRNA ligase activity | 5.79E-05 |
| 18 | GO:0019203: carbohydrate phosphatase activity | 5.79E-05 |
| 19 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.01E-04 |
| 20 | GO:0004047: aminomethyltransferase activity | 1.41E-04 |
| 21 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.41E-04 |
| 22 | GO:0042284: sphingolipid delta-4 desaturase activity | 1.41E-04 |
| 23 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.41E-04 |
| 24 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.41E-04 |
| 25 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 1.41E-04 |
| 26 | GO:0051082: unfolded protein binding | 2.06E-04 |
| 27 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 2.40E-04 |
| 28 | GO:0004751: ribose-5-phosphate isomerase activity | 2.40E-04 |
| 29 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 2.40E-04 |
| 30 | GO:0070402: NADPH binding | 2.40E-04 |
| 31 | GO:0035529: NADH pyrophosphatase activity | 3.49E-04 |
| 32 | GO:0001053: plastid sigma factor activity | 4.66E-04 |
| 33 | GO:0016987: sigma factor activity | 4.66E-04 |
| 34 | GO:0015250: water channel activity | 5.54E-04 |
| 35 | GO:2001070: starch binding | 7.24E-04 |
| 36 | GO:0016462: pyrophosphatase activity | 7.24E-04 |
| 37 | GO:0051287: NAD binding | 1.37E-03 |
| 38 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.48E-03 |
| 39 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 1.48E-03 |
| 40 | GO:0005384: manganese ion transmembrane transporter activity | 1.65E-03 |
| 41 | GO:0000049: tRNA binding | 2.21E-03 |
| 42 | GO:0016491: oxidoreductase activity | 2.33E-03 |
| 43 | GO:0005528: FK506 binding | 3.26E-03 |
| 44 | GO:0043424: protein histidine kinase binding | 3.49E-03 |
| 45 | GO:0008324: cation transmembrane transporter activity | 3.49E-03 |
| 46 | GO:0003756: protein disulfide isomerase activity | 4.44E-03 |
| 47 | GO:0016853: isomerase activity | 5.48E-03 |
| 48 | GO:0008483: transaminase activity | 7.18E-03 |
| 49 | GO:0016413: O-acetyltransferase activity | 7.47E-03 |
| 50 | GO:0016597: amino acid binding | 7.47E-03 |
| 51 | GO:0042803: protein homodimerization activity | 8.80E-03 |
| 52 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 9.03E-03 |
| 53 | GO:0030145: manganese ion binding | 1.04E-02 |
| 54 | GO:0003993: acid phosphatase activity | 1.14E-02 |
| 55 | GO:0050661: NADP binding | 1.21E-02 |
| 56 | GO:0004185: serine-type carboxypeptidase activity | 1.32E-02 |
| 57 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.40E-02 |
| 58 | GO:0005198: structural molecule activity | 1.44E-02 |
| 59 | GO:0015293: symporter activity | 1.44E-02 |
| 60 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.63E-02 |
| 61 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.88E-02 |
| 62 | GO:0019843: rRNA binding | 2.46E-02 |
| 63 | GO:0008168: methyltransferase activity | 4.11E-02 |
| 64 | GO:0016788: hydrolase activity, acting on ester bonds | 4.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009535: chloroplast thylakoid membrane | 3.89E-16 |
| 2 | GO:0009507: chloroplast | 4.24E-16 |
| 3 | GO:0009534: chloroplast thylakoid | 2.83E-08 |
| 4 | GO:0031977: thylakoid lumen | 4.16E-08 |
| 5 | GO:0009579: thylakoid | 5.55E-07 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 5.70E-07 |
| 7 | GO:0030076: light-harvesting complex | 1.88E-06 |
| 8 | GO:0009517: PSII associated light-harvesting complex II | 3.53E-06 |
| 9 | GO:0009570: chloroplast stroma | 3.61E-06 |
| 10 | GO:0009941: chloroplast envelope | 7.65E-06 |
| 11 | GO:0009782: photosystem I antenna complex | 5.79E-05 |
| 12 | GO:0009515: granal stacked thylakoid | 5.79E-05 |
| 13 | GO:0010287: plastoglobule | 2.59E-04 |
| 14 | GO:0009522: photosystem I | 3.37E-04 |
| 15 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 3.49E-04 |
| 16 | GO:0009523: photosystem II | 3.61E-04 |
| 17 | GO:0009533: chloroplast stromal thylakoid | 1.01E-03 |
| 18 | GO:0009654: photosystem II oxygen evolving complex | 3.49E-03 |
| 19 | GO:0016020: membrane | 3.77E-03 |
| 20 | GO:0005770: late endosome | 5.21E-03 |
| 21 | GO:0019898: extrinsic component of membrane | 5.75E-03 |
| 22 | GO:0015934: large ribosomal subunit | 1.04E-02 |
| 23 | GO:0031902: late endosome membrane | 1.25E-02 |
| 24 | GO:0005887: integral component of plasma membrane | 1.41E-02 |
| 25 | GO:0022626: cytosolic ribosome | 1.77E-02 |
| 26 | GO:0016021: integral component of membrane | 1.84E-02 |
| 27 | GO:0009706: chloroplast inner membrane | 2.10E-02 |
| 28 | GO:0009705: plant-type vacuole membrane | 3.09E-02 |
| 29 | GO:0046658: anchored component of plasma membrane | 3.78E-02 |