co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G14270

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0016553: base conversion or substitution editing	0.00E+00
2	GO:0002184: cytoplasmic translational termination	0.00E+00
3	GO:0019323: pentose catabolic process	0.00E+00
4	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
5	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
6	GO:0006412: translation	5.27E-15
7	GO:0032544: plastid translation	2.03E-14
8	GO:0009735: response to cytokinin	6.49E-12
9	GO:0042254: ribosome biogenesis	1.08E-09
10	GO:0019464: glycine decarboxylation via glycine cleavage system	1.77E-08
11	GO:0015979: photosynthesis	1.06E-07
12	GO:0010027: thylakoid membrane organization	1.56E-06
13	GO:0009409: response to cold	5.18E-06
14	GO:0009658: chloroplast organization	1.55E-05
15	GO:0019252: starch biosynthetic process	2.81E-05
16	GO:0010196: nonphotochemical quenching	3.42E-05
17	GO:0005978: glycogen biosynthetic process	4.50E-05
18	GO:0010206: photosystem II repair	7.10E-05
19	GO:0009817: defense response to fungus, incompatible interaction	8.45E-05
20	GO:0043489: RNA stabilization	8.61E-05
21	GO:0044262: cellular carbohydrate metabolic process	8.61E-05
22	GO:0009773: photosynthetic electron transport in photosystem I	1.22E-04
23	GO:0019388: galactose catabolic process	2.04E-04
24	GO:0030388: fructose 1,6-bisphosphate metabolic process	2.04E-04
25	GO:0010270: photosystem II oxygen evolving complex assembly	2.04E-04
26	GO:0006000: fructose metabolic process	3.42E-04
27	GO:0009052: pentose-phosphate shunt, non-oxidative branch	4.92E-04
28	GO:0010731: protein glutathionylation	4.92E-04
29	GO:0006424: glutamyl-tRNA aminoacylation	4.92E-04
30	GO:0009590: detection of gravity	4.92E-04
31	GO:0006241: CTP biosynthetic process	4.92E-04
32	GO:0006165: nucleoside diphosphate phosphorylation	4.92E-04
33	GO:0006228: UTP biosynthetic process	4.92E-04
34	GO:2000122: negative regulation of stomatal complex development	6.55E-04
35	GO:0006546: glycine catabolic process	6.55E-04
36	GO:0010021: amylopectin biosynthetic process	6.55E-04
37	GO:0010037: response to carbon dioxide	6.55E-04
38	GO:0015976: carbon utilization	6.55E-04
39	GO:0006183: GTP biosynthetic process	6.55E-04
40	GO:0045727: positive regulation of translation	6.55E-04
41	GO:0042742: defense response to bacterium	7.49E-04
42	GO:0032543: mitochondrial translation	8.29E-04
43	GO:0006461: protein complex assembly	8.29E-04
44	GO:0006544: glycine metabolic process	8.29E-04
45	GO:0006563: L-serine metabolic process	1.01E-03
46	GO:0000470: maturation of LSU-rRNA	1.01E-03
47	GO:0006828: manganese ion transport	1.01E-03
48	GO:0015995: chlorophyll biosynthetic process	1.07E-03
49	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.20E-03
50	GO:0009955: adaxial/abaxial pattern specification	1.20E-03
51	GO:1901259: chloroplast rRNA processing	1.20E-03
52	GO:0009853: photorespiration	1.48E-03
53	GO:0046686: response to cadmium ion	1.61E-03
54	GO:0006002: fructose 6-phosphate metabolic process	1.86E-03
55	GO:0009657: plastid organization	1.86E-03
56	GO:0006783: heme biosynthetic process	2.10E-03
57	GO:0035999: tetrahydrofolate interconversion	2.35E-03
58	GO:0006782: protoporphyrinogen IX biosynthetic process	2.61E-03
59	GO:0009750: response to fructose	2.87E-03
60	GO:0018119: peptidyl-cysteine S-nitrosylation	2.87E-03
61	GO:0006816: calcium ion transport	2.87E-03
62	GO:0006415: translational termination	2.87E-03
63	GO:0005983: starch catabolic process	3.15E-03
64	GO:0006006: glucose metabolic process	3.43E-03
65	GO:0006094: gluconeogenesis	3.43E-03
66	GO:0009767: photosynthetic electron transport chain	3.43E-03
67	GO:0005986: sucrose biosynthetic process	3.43E-03
68	GO:0010020: chloroplast fission	3.73E-03
69	GO:0019253: reductive pentose-phosphate cycle	3.73E-03
70	GO:0000027: ribosomal large subunit assembly	4.65E-03
71	GO:0006418: tRNA aminoacylation for protein translation	4.98E-03
72	GO:0009790: embryo development	5.23E-03
73	GO:0009411: response to UV	6.01E-03
74	GO:0007623: circadian rhythm	6.18E-03
75	GO:0009306: protein secretion	6.36E-03
76	GO:0015986: ATP synthesis coupled proton transport	7.87E-03
77	GO:0000302: response to reactive oxygen species	8.66E-03
78	GO:0030163: protein catabolic process	9.48E-03
79	GO:0080167: response to karrikin	1.19E-02
80	GO:0009793: embryo development ending in seed dormancy	1.22E-02
81	GO:0016311: dephosphorylation	1.31E-02
82	GO:0048481: plant ovule development	1.35E-02
83	GO:0010119: regulation of stomatal movement	1.50E-02
84	GO:0009631: cold acclimation	1.50E-02
85	GO:0045087: innate immune response	1.60E-02
86	GO:0034599: cellular response to oxidative stress	1.65E-02
87	GO:0042542: response to hydrogen peroxide	1.86E-02
88	GO:0055114: oxidation-reduction process	2.25E-02
89	GO:0006364: rRNA processing	2.37E-02
90	GO:0009585: red, far-red light phototransduction	2.37E-02
91	GO:0006810: transport	2.47E-02
92	GO:0005975: carbohydrate metabolic process	2.58E-02
93	GO:0006096: glycolytic process	2.67E-02
94	GO:0009626: plant-type hypersensitive response	2.79E-02
95	GO:0009624: response to nematode	3.04E-02
96	GO:0006396: RNA processing	3.11E-02
97	GO:0042744: hydrogen peroxide catabolic process	3.92E-02
98	GO:0040008: regulation of growth	4.34E-02
99	GO:0009451: RNA modification	4.56E-02

Rank	GO Term	Adjusted P value
1	GO:0051738: xanthophyll binding	0.00E+00
2	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
3	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
4	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
5	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
6	GO:0019843: rRNA binding	3.67E-22
7	GO:0003735: structural constituent of ribosome	2.54E-17
8	GO:0008266: poly(U) RNA binding	3.62E-08
9	GO:0004375: glycine dehydrogenase (decarboxylating) activity	3.65E-06
10	GO:0004856: xylulokinase activity	8.61E-05
11	GO:0009496: plastoquinol--plastocyanin reductase activity	8.61E-05
12	GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity	8.61E-05
13	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	8.61E-05
14	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	8.61E-05
15	GO:0004853: uroporphyrinogen decarboxylase activity	8.61E-05
16	GO:0004614: phosphoglucomutase activity	2.04E-04
17	GO:0004618: phosphoglycerate kinase activity	2.04E-04
18	GO:0033201: alpha-1,4-glucan synthase activity	2.04E-04
19	GO:0004750: ribulose-phosphate 3-epimerase activity	2.04E-04
20	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	2.04E-04
21	GO:0008967: phosphoglycolate phosphatase activity	2.04E-04
22	GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	3.42E-04
23	GO:0045174: glutathione dehydrogenase (ascorbate) activity	3.42E-04
24	GO:0004324: ferredoxin-NADP+ reductase activity	3.42E-04
25	GO:0004373: glycogen (starch) synthase activity	3.42E-04
26	GO:0002161: aminoacyl-tRNA editing activity	3.42E-04
27	GO:0016149: translation release factor activity, codon specific	4.92E-04
28	GO:0004550: nucleoside diphosphate kinase activity	4.92E-04
29	GO:0043023: ribosomal large subunit binding	4.92E-04
30	GO:0050662: coenzyme binding	5.62E-04
31	GO:0009011: starch synthase activity	6.55E-04
32	GO:0008878: glucose-1-phosphate adenylyltransferase activity	6.55E-04
33	GO:0004372: glycine hydroxymethyltransferase activity	8.29E-04
34	GO:0003959: NADPH dehydrogenase activity	8.29E-04
35	GO:0016773: phosphotransferase activity, alcohol group as acceptor	8.29E-04
36	GO:0004130: cytochrome-c peroxidase activity	1.01E-03
37	GO:0008236: serine-type peptidase activity	1.12E-03
38	GO:0004602: glutathione peroxidase activity	1.20E-03
39	GO:0051920: peroxiredoxin activity	1.20E-03
40	GO:0016491: oxidoreductase activity	1.20E-03
41	GO:0016209: antioxidant activity	1.63E-03
42	GO:0015078: hydrogen ion transmembrane transporter activity	1.86E-03
43	GO:0003747: translation release factor activity	2.10E-03
44	GO:0005384: manganese ion transmembrane transporter activity	2.35E-03
45	GO:0000049: tRNA binding	3.15E-03
46	GO:0004089: carbonate dehydratase activity	3.43E-03
47	GO:0015095: magnesium ion transmembrane transporter activity	3.43E-03
48	GO:0031072: heat shock protein binding	3.43E-03
49	GO:0004252: serine-type endopeptidase activity	4.98E-03
50	GO:0022891: substrate-specific transmembrane transporter activity	6.01E-03
51	GO:0003729: mRNA binding	6.28E-03
52	GO:0004812: aminoacyl-tRNA ligase activity	6.73E-03
53	GO:0048038: quinone binding	8.66E-03
54	GO:0004601: peroxidase activity	9.57E-03
55	GO:0008237: metallopeptidase activity	1.03E-02
56	GO:0016168: chlorophyll binding	1.17E-02
57	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.35E-02
58	GO:0004222: metalloendopeptidase activity	1.45E-02
59	GO:0004364: glutathione transferase activity	1.86E-02
60	GO:0051537: 2 iron, 2 sulfur cluster binding	2.02E-02
61	GO:0003723: RNA binding	2.64E-02
62	GO:0051082: unfolded protein binding	3.04E-02
63	GO:0030170: pyridoxal phosphate binding	3.85E-02

Rank	GO Term	Adjusted P value
1	GO:0098572: stromal side of plastid thylakoid membrane	0.00E+00
2	GO:0009507: chloroplast	1.20E-60
3	GO:0009941: chloroplast envelope	2.55E-50
4	GO:0009570: chloroplast stroma	2.00E-47
5	GO:0009579: thylakoid	2.63E-32
6	GO:0009535: chloroplast thylakoid membrane	3.19E-30
7	GO:0009534: chloroplast thylakoid	1.11E-28
8	GO:0005840: ribosome	9.37E-17
9	GO:0009543: chloroplast thylakoid lumen	1.92E-09
10	GO:0031977: thylakoid lumen	3.34E-09
11	GO:0010319: stromule	1.91E-08
12	GO:0009533: chloroplast stromal thylakoid	2.34E-07
13	GO:0016020: membrane	8.09E-07
14	GO:0005960: glycine cleavage complex	3.65E-06
15	GO:0009706: chloroplast inner membrane	3.11E-05
16	GO:0010287: plastoglobule	4.33E-05
17	GO:0009295: nucleoid	4.71E-05
18	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	7.10E-05
19	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	8.61E-05
20	GO:0048046: apoplast	1.29E-04
21	GO:0000311: plastid large ribosomal subunit	1.42E-04
22	GO:0009508: plastid chromosome	1.63E-04
23	GO:0030095: chloroplast photosystem II	1.86E-04
24	GO:0030093: chloroplast photosystem I	2.04E-04
25	GO:0009536: plastid	2.23E-04
26	GO:0009523: photosystem II	6.01E-04
27	GO:0009517: PSII associated light-harvesting complex II	6.55E-04
28	GO:0009512: cytochrome b6f complex	8.29E-04
29	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	1.01E-03
30	GO:0015934: large ribosomal subunit	1.35E-03
31	GO:0009501: amyloplast	1.63E-03
32	GO:0009538: photosystem I reaction center	1.63E-03
33	GO:0031969: chloroplast membrane	1.84E-03
34	GO:0022625: cytosolic large ribosomal subunit	1.96E-03
35	GO:0005763: mitochondrial small ribosomal subunit	2.10E-03
36	GO:0042644: chloroplast nucleoid	2.10E-03
37	GO:0000312: plastid small ribosomal subunit	3.73E-03
38	GO:0009654: photosystem II oxygen evolving complex	4.98E-03
39	GO:0015935: small ribosomal subunit	5.32E-03
40	GO:0022626: cytosolic ribosome	5.88E-03
41	GO:0019898: extrinsic component of membrane	8.26E-03
42	GO:0030529: intracellular ribonucleoprotein complex	1.12E-02
43	GO:0005759: mitochondrial matrix	4.20E-02