GO Enrichment Analysis of Co-expressed Genes with
AT1G12000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 2 | GO:0044794: positive regulation by host of viral process | 0.00E+00 |
| 3 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 4 | GO:0051050: positive regulation of transport | 0.00E+00 |
| 5 | GO:0006457: protein folding | 2.48E-07 |
| 6 | GO:0034976: response to endoplasmic reticulum stress | 2.48E-07 |
| 7 | GO:0009735: response to cytokinin | 2.63E-06 |
| 8 | GO:0046686: response to cadmium ion | 5.19E-05 |
| 9 | GO:0045859: regulation of protein kinase activity | 5.64E-05 |
| 10 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 5.64E-05 |
| 11 | GO:0045039: protein import into mitochondrial inner membrane | 9.94E-05 |
| 12 | GO:0006556: S-adenosylmethionine biosynthetic process | 9.94E-05 |
| 13 | GO:0010483: pollen tube reception | 2.04E-04 |
| 14 | GO:0051205: protein insertion into membrane | 2.04E-04 |
| 15 | GO:0045454: cell redox homeostasis | 2.47E-04 |
| 16 | GO:0009651: response to salt stress | 2.53E-04 |
| 17 | GO:0018279: protein N-linked glycosylation via asparagine | 2.62E-04 |
| 18 | GO:0006461: protein complex assembly | 2.62E-04 |
| 19 | GO:0042176: regulation of protein catabolic process | 3.24E-04 |
| 20 | GO:0006458: 'de novo' protein folding | 3.89E-04 |
| 21 | GO:0043562: cellular response to nitrogen levels | 5.98E-04 |
| 22 | GO:0001558: regulation of cell growth | 5.98E-04 |
| 23 | GO:0010205: photoinhibition | 7.48E-04 |
| 24 | GO:0043067: regulation of programmed cell death | 7.48E-04 |
| 25 | GO:0010162: seed dormancy process | 8.27E-04 |
| 26 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.43E-03 |
| 27 | GO:0006487: protein N-linked glycosylation | 1.43E-03 |
| 28 | GO:0051302: regulation of cell division | 1.53E-03 |
| 29 | GO:0061077: chaperone-mediated protein folding | 1.63E-03 |
| 30 | GO:0007005: mitochondrion organization | 1.73E-03 |
| 31 | GO:0006730: one-carbon metabolic process | 1.73E-03 |
| 32 | GO:0009294: DNA mediated transformation | 1.83E-03 |
| 33 | GO:0009693: ethylene biosynthetic process | 1.83E-03 |
| 34 | GO:0008033: tRNA processing | 2.15E-03 |
| 35 | GO:0016032: viral process | 2.73E-03 |
| 36 | GO:0030163: protein catabolic process | 2.85E-03 |
| 37 | GO:0071281: cellular response to iron ion | 2.85E-03 |
| 38 | GO:0042128: nitrate assimilation | 3.60E-03 |
| 39 | GO:0006888: ER to Golgi vesicle-mediated transport | 3.73E-03 |
| 40 | GO:0016049: cell growth | 3.87E-03 |
| 41 | GO:0010043: response to zinc ion | 4.42E-03 |
| 42 | GO:0009631: cold acclimation | 4.42E-03 |
| 43 | GO:0048527: lateral root development | 4.42E-03 |
| 44 | GO:0009744: response to sucrose | 5.60E-03 |
| 45 | GO:0009644: response to high light intensity | 5.91E-03 |
| 46 | GO:0000154: rRNA modification | 6.07E-03 |
| 47 | GO:0006364: rRNA processing | 6.88E-03 |
| 48 | GO:0006511: ubiquitin-dependent protein catabolic process | 7.24E-03 |
| 49 | GO:0048316: seed development | 7.90E-03 |
| 50 | GO:0006414: translational elongation | 7.95E-03 |
| 51 | GO:0009790: embryo development | 1.15E-02 |
| 52 | GO:0006633: fatty acid biosynthetic process | 1.21E-02 |
| 53 | GO:0006413: translational initiation | 1.23E-02 |
| 54 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.33E-02 |
| 55 | GO:0009723: response to ethylene | 1.95E-02 |
| 56 | GO:0007275: multicellular organism development | 2.13E-02 |
| 57 | GO:0045892: negative regulation of transcription, DNA-templated | 2.36E-02 |
| 58 | GO:0006886: intracellular protein transport | 2.38E-02 |
| 59 | GO:0009734: auxin-activated signaling pathway | 3.46E-02 |
| 60 | GO:0051301: cell division | 4.33E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003756: protein disulfide isomerase activity | 7.02E-07 |
| 2 | GO:0003746: translation elongation factor activity | 7.34E-06 |
| 3 | GO:0044183: protein binding involved in protein folding | 1.56E-05 |
| 4 | GO:0015157: oligosaccharide transmembrane transporter activity | 2.19E-05 |
| 5 | GO:0004679: AMP-activated protein kinase activity | 2.19E-05 |
| 6 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 5.64E-05 |
| 7 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 5.64E-05 |
| 8 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 5.64E-05 |
| 9 | GO:0004478: methionine adenosyltransferase activity | 9.94E-05 |
| 10 | GO:0008469: histone-arginine N-methyltransferase activity | 9.94E-05 |
| 11 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 2.62E-04 |
| 12 | GO:0019887: protein kinase regulator activity | 3.89E-04 |
| 13 | GO:0008235: metalloexopeptidase activity | 4.56E-04 |
| 14 | GO:0030515: snoRNA binding | 4.56E-04 |
| 15 | GO:0008135: translation factor activity, RNA binding | 5.98E-04 |
| 16 | GO:0051082: unfolded protein binding | 6.56E-04 |
| 17 | GO:0030234: enzyme regulator activity | 8.27E-04 |
| 18 | GO:0005524: ATP binding | 9.96E-04 |
| 19 | GO:0009982: pseudouridine synthase activity | 1.07E-03 |
| 20 | GO:0005525: GTP binding | 1.24E-03 |
| 21 | GO:0003743: translation initiation factor activity | 1.28E-03 |
| 22 | GO:0004407: histone deacetylase activity | 1.43E-03 |
| 23 | GO:0010181: FMN binding | 2.38E-03 |
| 24 | GO:0003729: mRNA binding | 2.65E-03 |
| 25 | GO:0003924: GTPase activity | 3.03E-03 |
| 26 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.00E-03 |
| 27 | GO:0050897: cobalt ion binding | 4.42E-03 |
| 28 | GO:0051539: 4 iron, 4 sulfur cluster binding | 5.15E-03 |
| 29 | GO:0008026: ATP-dependent helicase activity | 9.16E-03 |
| 30 | GO:0019843: rRNA binding | 1.03E-02 |
| 31 | GO:0016829: lyase activity | 1.09E-02 |
| 32 | GO:0008168: methyltransferase activity | 1.71E-02 |
| 33 | GO:0003723: RNA binding | 2.17E-02 |
| 34 | GO:0000166: nucleotide binding | 4.07E-02 |
| 35 | GO:0005515: protein binding | 4.36E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 2 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 3 | GO:0005788: endoplasmic reticulum lumen | 3.22E-08 |
| 4 | GO:0005829: cytosol | 3.08E-07 |
| 5 | GO:0005774: vacuolar membrane | 2.69E-06 |
| 6 | GO:0005618: cell wall | 4.20E-06 |
| 7 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.56E-05 |
| 8 | GO:0005730: nucleolus | 6.22E-05 |
| 9 | GO:0005783: endoplasmic reticulum | 1.84E-04 |
| 10 | GO:0008250: oligosaccharyltransferase complex | 2.62E-04 |
| 11 | GO:0031428: box C/D snoRNP complex | 3.24E-04 |
| 12 | GO:0030127: COPII vesicle coat | 3.24E-04 |
| 13 | GO:0000502: proteasome complex | 4.67E-04 |
| 14 | GO:0005747: mitochondrial respiratory chain complex I | 5.67E-04 |
| 15 | GO:0000326: protein storage vacuole | 5.98E-04 |
| 16 | GO:0032040: small-subunit processome | 9.89E-04 |
| 17 | GO:0009505: plant-type cell wall | 2.14E-03 |
| 18 | GO:0009506: plasmodesma | 2.88E-03 |
| 19 | GO:0030529: intracellular ribonucleoprotein complex | 3.34E-03 |
| 20 | GO:0015934: large ribosomal subunit | 4.42E-03 |
| 21 | GO:0005737: cytoplasm | 7.38E-03 |
| 22 | GO:0005834: heterotrimeric G-protein complex | 8.08E-03 |
| 23 | GO:0005739: mitochondrion | 8.63E-03 |
| 24 | GO:0016020: membrane | 1.08E-02 |
| 25 | GO:0005759: mitochondrial matrix | 1.21E-02 |
| 26 | GO:0005773: vacuole | 1.33E-02 |
| 27 | GO:0046658: anchored component of plasma membrane | 1.58E-02 |
| 28 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.88E-02 |
| 29 | GO:0022625: cytosolic large ribosomal subunit | 2.13E-02 |
| 30 | GO:0005886: plasma membrane | 2.16E-02 |
| 31 | GO:0005743: mitochondrial inner membrane | 2.57E-02 |
| 32 | GO:0022626: cytosolic ribosome | 3.95E-02 |
| 33 | GO:0009579: thylakoid | 4.63E-02 |