co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G11720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
2	GO:0015882: L-ascorbic acid transport	0.00E+00
3	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
4	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
5	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
6	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
7	GO:0015979: photosynthesis	1.34E-07
8	GO:0006000: fructose metabolic process	4.55E-07
9	GO:0006021: inositol biosynthetic process	2.14E-06
10	GO:0046855: inositol phosphate dephosphorylation	5.63E-06
11	GO:0009645: response to low light intensity stimulus	1.13E-05
12	GO:0009657: plastid organization	1.95E-05
13	GO:0006002: fructose 6-phosphate metabolic process	1.95E-05
14	GO:0051775: response to redox state	4.31E-05
15	GO:0071277: cellular response to calcium ion	4.31E-05
16	GO:0043609: regulation of carbon utilization	4.31E-05
17	GO:0010028: xanthophyll cycle	4.31E-05
18	GO:0006419: alanyl-tRNA aminoacylation	4.31E-05
19	GO:0006790: sulfur compound metabolic process	5.14E-05
20	GO:0019253: reductive pentose-phosphate cycle	6.90E-05
21	GO:0046854: phosphatidylinositol phosphorylation	7.88E-05
22	GO:0000256: allantoin catabolic process	1.07E-04
23	GO:0030388: fructose 1,6-bisphosphate metabolic process	1.07E-04
24	GO:0009768: photosynthesis, light harvesting in photosystem I	1.12E-04
25	GO:0010136: ureide catabolic process	1.84E-04
26	GO:0005977: glycogen metabolic process	1.84E-04
27	GO:0019252: starch biosynthetic process	2.46E-04
28	GO:0006145: purine nucleobase catabolic process	2.70E-04
29	GO:0006020: inositol metabolic process	2.70E-04
30	GO:0006107: oxaloacetate metabolic process	2.70E-04
31	GO:0006734: NADH metabolic process	3.64E-04
32	GO:0010021: amylopectin biosynthetic process	3.64E-04
33	GO:0015994: chlorophyll metabolic process	3.64E-04
34	GO:0015995: chlorophyll biosynthetic process	4.50E-04
35	GO:0018298: protein-chromophore linkage	4.98E-04
36	GO:0050665: hydrogen peroxide biosynthetic process	5.67E-04
37	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	5.67E-04
38	GO:0034599: cellular response to oxidative stress	6.53E-04
39	GO:0010189: vitamin E biosynthetic process	6.76E-04
40	GO:0009854: oxidative photosynthetic carbon pathway	6.76E-04
41	GO:0071470: cellular response to osmotic stress	6.76E-04
42	GO:0009769: photosynthesis, light harvesting in photosystem II	7.90E-04
43	GO:0006400: tRNA modification	7.90E-04
44	GO:0010114: response to red light	7.97E-04
45	GO:0055114: oxidation-reduction process	8.25E-04
46	GO:0009644: response to high light intensity	8.59E-04
47	GO:0009642: response to light intensity	9.08E-04
48	GO:0009704: de-etiolation	9.08E-04
49	GO:0016559: peroxisome fission	9.08E-04
50	GO:0017004: cytochrome complex assembly	1.03E-03
51	GO:0071482: cellular response to light stimulus	1.03E-03
52	GO:0090333: regulation of stomatal closure	1.16E-03
53	GO:0006754: ATP biosynthetic process	1.16E-03
54	GO:0098656: anion transmembrane transport	1.16E-03
55	GO:0006396: RNA processing	1.52E-03
56	GO:0009773: photosynthetic electron transport in photosystem I	1.57E-03
57	GO:0006415: translational termination	1.57E-03
58	GO:0043085: positive regulation of catalytic activity	1.57E-03
59	GO:0005975: carbohydrate metabolic process	1.61E-03
60	GO:0006108: malate metabolic process	1.87E-03
61	GO:0006006: glucose metabolic process	1.87E-03
62	GO:0006094: gluconeogenesis	1.87E-03
63	GO:0009767: photosynthetic electron transport chain	1.87E-03
64	GO:0005986: sucrose biosynthetic process	1.87E-03
65	GO:0010020: chloroplast fission	2.03E-03
66	GO:0019853: L-ascorbic acid biosynthetic process	2.19E-03
67	GO:0006825: copper ion transport	2.70E-03
68	GO:0008299: isoprenoid biosynthetic process	2.70E-03
69	GO:0009269: response to desiccation	2.88E-03
70	GO:0009793: embryo development ending in seed dormancy	3.05E-03
71	GO:0019748: secondary metabolic process	3.06E-03
72	GO:0009658: chloroplast organization	3.88E-03
73	GO:0006662: glycerol ether metabolic process	4.02E-03
74	GO:0009791: post-embryonic development	4.43E-03
75	GO:0045454: cell redox homeostasis	5.75E-03
76	GO:0010027: thylakoid membrane organization	5.98E-03
77	GO:0009409: response to cold	7.04E-03
78	GO:0006499: N-terminal protein myristoylation	7.69E-03
79	GO:0010218: response to far red light	7.69E-03
80	GO:0007568: aging	7.95E-03
81	GO:0016051: carbohydrate biosynthetic process	8.47E-03
82	GO:0009637: response to blue light	8.47E-03
83	GO:0006099: tricarboxylic acid cycle	8.74E-03
84	GO:0006364: rRNA processing	1.25E-02
85	GO:0009416: response to light stimulus	1.26E-02
86	GO:0006417: regulation of translation	1.34E-02
87	GO:0006096: glycolytic process	1.40E-02
88	GO:0009845: seed germination	1.99E-02
89	GO:0006413: translational initiation	2.25E-02
90	GO:0007623: circadian rhythm	2.36E-02
91	GO:0042742: defense response to bacterium	2.56E-02
92	GO:0042254: ribosome biogenesis	3.27E-02
93	GO:0080167: response to karrikin	3.76E-02
94	GO:0046686: response to cadmium ion	3.97E-02
95	GO:0009408: response to heat	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0071522: ureidoglycine aminohydrolase activity	0.00E+00
2	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
3	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
4	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
5	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
6	GO:0045550: geranylgeranyl reductase activity	0.00E+00
7	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
8	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
9	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
10	GO:0003858: 3-hydroxybutyrate dehydrogenase activity	0.00E+00
11	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
12	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
13	GO:0008934: inositol monophosphate 1-phosphatase activity	1.17E-07
14	GO:0052833: inositol monophosphate 4-phosphatase activity	1.17E-07
15	GO:0052832: inositol monophosphate 3-phosphatase activity	1.17E-07
16	GO:0046872: metal ion binding	7.31E-07
17	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	8.18E-06
18	GO:0004813: alanine-tRNA ligase activity	4.31E-05
19	GO:0004008: copper-exporting ATPase activity	4.31E-05
20	GO:0008746: NAD(P)+ transhydrogenase activity	4.31E-05
21	GO:0010347: L-galactose-1-phosphate phosphatase activity	4.31E-05
22	GO:0016784: 3-mercaptopyruvate sulfurtransferase activity	4.31E-05
23	GO:0080042: ADP-glucose pyrophosphohydrolase activity	4.31E-05
24	GO:0031409: pigment binding	8.92E-05
25	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	1.07E-04
26	GO:0019156: isoamylase activity	1.07E-04
27	GO:0047746: chlorophyllase activity	1.07E-04
28	GO:0080041: ADP-ribose pyrophosphohydrolase activity	1.07E-04
29	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.07E-04
30	GO:0004148: dihydrolipoyl dehydrogenase activity	1.84E-04
31	GO:0030267: glyoxylate reductase (NADP) activity	1.84E-04
32	GO:0070402: NADPH binding	1.84E-04
33	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.84E-04
34	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	2.70E-04
35	GO:0004792: thiosulfate sulfurtransferase activity	2.70E-04
36	GO:0016149: translation release factor activity, codon specific	2.70E-04
37	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	2.70E-04
38	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	2.70E-04
39	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	2.70E-04
40	GO:0008891: glycolate oxidase activity	3.64E-04
41	GO:0016168: chlorophyll binding	4.05E-04
42	GO:0042578: phosphoric ester hydrolase activity	5.67E-04
43	GO:0004556: alpha-amylase activity	5.67E-04
44	GO:0016615: malate dehydrogenase activity	5.67E-04
45	GO:2001070: starch binding	5.67E-04
46	GO:0030060: L-malate dehydrogenase activity	6.76E-04
47	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	6.76E-04
48	GO:0051287: NAD binding	9.55E-04
49	GO:0003924: GTPase activity	9.64E-04
50	GO:0005375: copper ion transmembrane transporter activity	1.03E-03
51	GO:0008135: translation factor activity, RNA binding	1.03E-03
52	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.16E-03
53	GO:0003747: translation release factor activity	1.16E-03
54	GO:0008047: enzyme activator activity	1.43E-03
55	GO:0000049: tRNA binding	1.72E-03
56	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.87E-03
57	GO:0005315: inorganic phosphate transmembrane transporter activity	1.87E-03
58	GO:0031072: heat shock protein binding	1.87E-03
59	GO:0016787: hydrolase activity	2.71E-03
60	GO:0042802: identical protein binding	3.20E-03
61	GO:0003727: single-stranded RNA binding	3.43E-03
62	GO:0008514: organic anion transmembrane transporter activity	3.43E-03
63	GO:0047134: protein-disulfide reductase activity	3.63E-03
64	GO:0005525: GTP binding	3.69E-03
65	GO:0010181: FMN binding	4.23E-03
66	GO:0004791: thioredoxin-disulfide reductase activity	4.23E-03
67	GO:0016853: isomerase activity	4.23E-03
68	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	5.07E-03
69	GO:0016597: amino acid binding	5.75E-03
70	GO:0004721: phosphoprotein phosphatase activity	6.69E-03
71	GO:0050897: cobalt ion binding	7.95E-03
72	GO:0030145: manganese ion binding	7.95E-03
73	GO:0003746: translation elongation factor activity	8.47E-03
74	GO:0050661: NADP binding	9.28E-03
75	GO:0004185: serine-type carboxypeptidase activity	1.01E-02
76	GO:0043621: protein self-association	1.07E-02
77	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.44E-02
78	GO:0051082: unfolded protein binding	1.60E-02
79	GO:0015035: protein disulfide oxidoreductase activity	1.64E-02
80	GO:0008017: microtubule binding	2.44E-02
81	GO:0003743: translation initiation factor activity	2.64E-02
82	GO:0016491: oxidoreductase activity	3.36E-02
83	GO:0050660: flavin adenine dinucleotide binding	3.58E-02
84	GO:0052689: carboxylic ester hydrolase activity	4.03E-02
85	GO:0042803: protein homodimerization activity	4.41E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	2.93E-21
2	GO:0009570: chloroplast stroma	5.00E-14
3	GO:0009941: chloroplast envelope	9.31E-14
4	GO:0009535: chloroplast thylakoid membrane	3.72E-13
5	GO:0009534: chloroplast thylakoid	5.80E-09
6	GO:0009579: thylakoid	1.40E-07
7	GO:0009782: photosystem I antenna complex	4.31E-05
8	GO:0048046: apoplast	5.19E-05
9	GO:0030076: light-harvesting complex	7.88E-05
10	GO:0009543: chloroplast thylakoid lumen	1.66E-04
11	GO:0009517: PSII associated light-harvesting complex II	3.64E-04
12	GO:0009706: chloroplast inner membrane	1.48E-03
13	GO:0010287: plastoglobule	1.75E-03
14	GO:0005578: proteinaceous extracellular matrix	1.87E-03
15	GO:0009654: photosystem II oxygen evolving complex	2.70E-03
16	GO:0009522: photosystem I	4.23E-03
17	GO:0009523: photosystem II	4.43E-03
18	GO:0019898: extrinsic component of membrane	4.43E-03
19	GO:0031969: chloroplast membrane	4.80E-03
20	GO:0009707: chloroplast outer membrane	7.19E-03
21	GO:0031977: thylakoid lumen	9.56E-03
22	GO:0005747: mitochondrial respiratory chain complex I	1.44E-02
23	GO:0005777: peroxisome	1.45E-02
24	GO:0005623: cell	1.91E-02
25	GO:0005759: mitochondrial matrix	2.21E-02
26	GO:0016020: membrane	2.38E-02
27	GO:0005829: cytosol	2.91E-02