GO Enrichment Analysis of Co-expressed Genes with
AT1G11430
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046085: adenosine metabolic process | 0.00E+00 |
| 2 | GO:0006720: isoprenoid metabolic process | 0.00E+00 |
| 3 | GO:0009249: protein lipoylation | 0.00E+00 |
| 4 | GO:0015822: ornithine transport | 0.00E+00 |
| 5 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 6 | GO:0036172: thiamine salvage | 0.00E+00 |
| 7 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 8 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 9 | GO:0000066: mitochondrial ornithine transport | 1.71E-04 |
| 10 | GO:0016487: farnesol metabolic process | 1.71E-04 |
| 11 | GO:0016031: tRNA import into mitochondrion | 1.71E-04 |
| 12 | GO:0034243: regulation of transcription elongation from RNA polymerase II promoter | 3.87E-04 |
| 13 | GO:0016122: xanthophyll metabolic process | 3.87E-04 |
| 14 | GO:2000071: regulation of defense response by callose deposition | 3.87E-04 |
| 15 | GO:0006432: phenylalanyl-tRNA aminoacylation | 3.87E-04 |
| 16 | GO:0071492: cellular response to UV-A | 6.32E-04 |
| 17 | GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation | 6.32E-04 |
| 18 | GO:0032786: positive regulation of DNA-templated transcription, elongation | 6.32E-04 |
| 19 | GO:0009399: nitrogen fixation | 9.04E-04 |
| 20 | GO:0009963: positive regulation of flavonoid biosynthetic process | 9.04E-04 |
| 21 | GO:0009647: skotomorphogenesis | 9.04E-04 |
| 22 | GO:0034613: cellular protein localization | 1.20E-03 |
| 23 | GO:0006542: glutamine biosynthetic process | 1.20E-03 |
| 24 | GO:1900864: mitochondrial RNA modification | 1.20E-03 |
| 25 | GO:0071486: cellular response to high light intensity | 1.20E-03 |
| 26 | GO:0009765: photosynthesis, light harvesting | 1.20E-03 |
| 27 | GO:0009649: entrainment of circadian clock | 1.20E-03 |
| 28 | GO:0008295: spermidine biosynthetic process | 1.20E-03 |
| 29 | GO:0009229: thiamine diphosphate biosynthetic process | 1.52E-03 |
| 30 | GO:0009107: lipoate biosynthetic process | 1.52E-03 |
| 31 | GO:0006544: glycine metabolic process | 1.52E-03 |
| 32 | GO:0010117: photoprotection | 1.52E-03 |
| 33 | GO:0046283: anthocyanin-containing compound metabolic process | 1.52E-03 |
| 34 | GO:0080156: mitochondrial mRNA modification | 1.57E-03 |
| 35 | GO:0006563: L-serine metabolic process | 1.87E-03 |
| 36 | GO:0016070: RNA metabolic process | 1.87E-03 |
| 37 | GO:0031053: primary miRNA processing | 1.87E-03 |
| 38 | GO:0009228: thiamine biosynthetic process | 1.87E-03 |
| 39 | GO:0006796: phosphate-containing compound metabolic process | 1.87E-03 |
| 40 | GO:0010190: cytochrome b6f complex assembly | 1.87E-03 |
| 41 | GO:0033365: protein localization to organelle | 1.87E-03 |
| 42 | GO:0009117: nucleotide metabolic process | 1.87E-03 |
| 43 | GO:0006281: DNA repair | 2.07E-03 |
| 44 | GO:0034389: lipid particle organization | 2.24E-03 |
| 45 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 2.24E-03 |
| 46 | GO:0000054: ribosomal subunit export from nucleus | 2.24E-03 |
| 47 | GO:0009704: de-etiolation | 3.06E-03 |
| 48 | GO:0045292: mRNA cis splicing, via spliceosome | 3.06E-03 |
| 49 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 3.06E-03 |
| 50 | GO:0032544: plastid translation | 3.50E-03 |
| 51 | GO:0022900: electron transport chain | 3.50E-03 |
| 52 | GO:0019430: removal of superoxide radicals | 3.50E-03 |
| 53 | GO:0010100: negative regulation of photomorphogenesis | 3.50E-03 |
| 54 | GO:0098656: anion transmembrane transport | 3.95E-03 |
| 55 | GO:0009245: lipid A biosynthetic process | 3.95E-03 |
| 56 | GO:0019432: triglyceride biosynthetic process | 3.95E-03 |
| 57 | GO:0035999: tetrahydrofolate interconversion | 4.44E-03 |
| 58 | GO:0009688: abscisic acid biosynthetic process | 4.93E-03 |
| 59 | GO:0009641: shade avoidance | 4.93E-03 |
| 60 | GO:0006325: chromatin organization | 4.93E-03 |
| 61 | GO:0009682: induced systemic resistance | 5.45E-03 |
| 62 | GO:0009585: red, far-red light phototransduction | 6.43E-03 |
| 63 | GO:0006094: gluconeogenesis | 6.54E-03 |
| 64 | GO:0010224: response to UV-B | 6.66E-03 |
| 65 | GO:0048440: carpel development | 7.11E-03 |
| 66 | GO:0010020: chloroplast fission | 7.11E-03 |
| 67 | GO:0010039: response to iron ion | 7.69E-03 |
| 68 | GO:0006071: glycerol metabolic process | 8.30E-03 |
| 69 | GO:0034976: response to endoplasmic reticulum stress | 8.30E-03 |
| 70 | GO:0015992: proton transport | 1.02E-02 |
| 71 | GO:0019915: lipid storage | 1.02E-02 |
| 72 | GO:0007005: mitochondrion organization | 1.09E-02 |
| 73 | GO:0016226: iron-sulfur cluster assembly | 1.09E-02 |
| 74 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.09E-02 |
| 75 | GO:0006012: galactose metabolic process | 1.16E-02 |
| 76 | GO:0010118: stomatal movement | 1.37E-02 |
| 77 | GO:0006606: protein import into nucleus | 1.37E-02 |
| 78 | GO:0015991: ATP hydrolysis coupled proton transport | 1.37E-02 |
| 79 | GO:0006662: glycerol ether metabolic process | 1.45E-02 |
| 80 | GO:0008654: phospholipid biosynthetic process | 1.60E-02 |
| 81 | GO:0002229: defense response to oomycetes | 1.68E-02 |
| 82 | GO:0030163: protein catabolic process | 1.84E-02 |
| 83 | GO:0010090: trichome morphogenesis | 1.84E-02 |
| 84 | GO:0042128: nitrate assimilation | 2.36E-02 |
| 85 | GO:0048573: photoperiodism, flowering | 2.45E-02 |
| 86 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.45E-02 |
| 87 | GO:0048527: lateral root development | 2.93E-02 |
| 88 | GO:0010119: regulation of stomatal movement | 2.93E-02 |
| 89 | GO:0009853: photorespiration | 3.12E-02 |
| 90 | GO:0009867: jasmonic acid mediated signaling pathway | 3.12E-02 |
| 91 | GO:0006099: tricarboxylic acid cycle | 3.22E-02 |
| 92 | GO:0034599: cellular response to oxidative stress | 3.22E-02 |
| 93 | GO:0006839: mitochondrial transport | 3.43E-02 |
| 94 | GO:0045454: cell redox homeostasis | 3.65E-02 |
| 95 | GO:0009640: photomorphogenesis | 3.74E-02 |
| 96 | GO:0000154: rRNA modification | 4.06E-02 |
| 97 | GO:0009965: leaf morphogenesis | 4.06E-02 |
| 98 | GO:0008150: biological_process | 4.22E-02 |
| 99 | GO:0031347: regulation of defense response | 4.29E-02 |
| 100 | GO:0009737: response to abscisic acid | 4.39E-02 |
| 101 | GO:0042742: defense response to bacterium | 4.93E-02 |
| 102 | GO:0006417: regulation of translation | 4.97E-02 |
| 103 | GO:0006979: response to oxidative stress | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047710: bis(5'-adenosyl)-triphosphatase activity | 0.00E+00 |
| 2 | GO:0052669: CTP:2-trans,-6-trans-farnesol kinase activity | 0.00E+00 |
| 3 | GO:0004417: hydroxyethylthiazole kinase activity | 0.00E+00 |
| 4 | GO:0052670: geraniol kinase activity | 0.00E+00 |
| 5 | GO:0052668: farnesol kinase activity | 0.00E+00 |
| 6 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 7 | GO:0043530: adenosine 5'-monophosphoramidase activity | 0.00E+00 |
| 8 | GO:0052671: geranylgeraniol kinase activity | 0.00E+00 |
| 9 | GO:0017118: lipoyltransferase activity | 3.87E-04 |
| 10 | GO:0016415: octanoyltransferase activity | 3.87E-04 |
| 11 | GO:0004766: spermidine synthase activity | 3.87E-04 |
| 12 | GO:0000064: L-ornithine transmembrane transporter activity | 3.87E-04 |
| 13 | GO:0004826: phenylalanine-tRNA ligase activity | 3.87E-04 |
| 14 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 3.87E-04 |
| 15 | GO:0017176: phosphatidylinositol N-acetylglucosaminyltransferase activity | 6.32E-04 |
| 16 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 6.32E-04 |
| 17 | GO:0008265: Mo-molybdopterin cofactor sulfurase activity | 6.32E-04 |
| 18 | GO:0004848: ureidoglycolate hydrolase activity | 6.32E-04 |
| 19 | GO:0008649: rRNA methyltransferase activity | 6.32E-04 |
| 20 | GO:0016656: monodehydroascorbate reductase (NADH) activity | 9.04E-04 |
| 21 | GO:0000339: RNA cap binding | 9.04E-04 |
| 22 | GO:0047627: adenylylsulfatase activity | 9.04E-04 |
| 23 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 9.04E-04 |
| 24 | GO:0005319: lipid transporter activity | 1.20E-03 |
| 25 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 1.20E-03 |
| 26 | GO:0000993: RNA polymerase II core binding | 1.20E-03 |
| 27 | GO:0004386: helicase activity | 1.48E-03 |
| 28 | GO:0005496: steroid binding | 1.52E-03 |
| 29 | GO:0004356: glutamate-ammonia ligase activity | 1.52E-03 |
| 30 | GO:0030151: molybdenum ion binding | 1.52E-03 |
| 31 | GO:0004372: glycine hydroxymethyltransferase activity | 1.52E-03 |
| 32 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.87E-03 |
| 33 | GO:0004784: superoxide dismutase activity | 1.87E-03 |
| 34 | GO:0031177: phosphopantetheine binding | 1.87E-03 |
| 35 | GO:0070300: phosphatidic acid binding | 2.24E-03 |
| 36 | GO:0000035: acyl binding | 2.24E-03 |
| 37 | GO:0004144: diacylglycerol O-acyltransferase activity | 2.24E-03 |
| 38 | GO:0004427: inorganic diphosphatase activity | 2.64E-03 |
| 39 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 3.06E-03 |
| 40 | GO:0004034: aldose 1-epimerase activity | 3.06E-03 |
| 41 | GO:0071949: FAD binding | 3.95E-03 |
| 42 | GO:0047617: acyl-CoA hydrolase activity | 4.44E-03 |
| 43 | GO:0001055: RNA polymerase II activity | 4.44E-03 |
| 44 | GO:0008047: enzyme activator activity | 4.93E-03 |
| 45 | GO:0000049: tRNA binding | 5.98E-03 |
| 46 | GO:0005315: inorganic phosphate transmembrane transporter activity | 6.54E-03 |
| 47 | GO:0015266: protein channel activity | 6.54E-03 |
| 48 | GO:0003727: single-stranded RNA binding | 1.23E-02 |
| 49 | GO:0008514: organic anion transmembrane transporter activity | 1.23E-02 |
| 50 | GO:0003756: protein disulfide isomerase activity | 1.23E-02 |
| 51 | GO:0030170: pyridoxal phosphate binding | 1.28E-02 |
| 52 | GO:0047134: protein-disulfide reductase activity | 1.30E-02 |
| 53 | GO:0015144: carbohydrate transmembrane transporter activity | 1.38E-02 |
| 54 | GO:0008080: N-acetyltransferase activity | 1.45E-02 |
| 55 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.45E-02 |
| 56 | GO:0004791: thioredoxin-disulfide reductase activity | 1.52E-02 |
| 57 | GO:0016853: isomerase activity | 1.52E-02 |
| 58 | GO:0005351: sugar:proton symporter activity | 1.55E-02 |
| 59 | GO:0003824: catalytic activity | 1.66E-02 |
| 60 | GO:0048038: quinone binding | 1.68E-02 |
| 61 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.84E-02 |
| 62 | GO:0016168: chlorophyll binding | 2.27E-02 |
| 63 | GO:0008375: acetylglucosaminyltransferase activity | 2.36E-02 |
| 64 | GO:0005515: protein binding | 2.64E-02 |
| 65 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.64E-02 |
| 66 | GO:0050897: cobalt ion binding | 2.93E-02 |
| 67 | GO:0003746: translation elongation factor activity | 3.12E-02 |
| 68 | GO:0003697: single-stranded DNA binding | 3.12E-02 |
| 69 | GO:0050661: NADP binding | 3.43E-02 |
| 70 | GO:0005525: GTP binding | 3.83E-02 |
| 71 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.96E-02 |
| 72 | GO:0043621: protein self-association | 3.96E-02 |
| 73 | GO:0051287: NAD binding | 4.29E-02 |
| 74 | GO:0003924: GTPase activity | 4.49E-02 |
| 75 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016469: proton-transporting two-sector ATPase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.58E-10 |
| 3 | GO:0005845: mRNA cap binding complex | 1.71E-04 |
| 4 | GO:0000152: nuclear ubiquitin ligase complex | 1.71E-04 |
| 5 | GO:0043190: ATP-binding cassette (ABC) transporter complex | 1.71E-04 |
| 6 | GO:0032044: DSIF complex | 1.71E-04 |
| 7 | GO:0005846: nuclear cap binding complex | 3.87E-04 |
| 8 | GO:0009536: plastid | 4.13E-04 |
| 9 | GO:0009535: chloroplast thylakoid membrane | 4.63E-04 |
| 10 | GO:0042646: plastid nucleoid | 9.04E-04 |
| 11 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 1.20E-03 |
| 12 | GO:0009517: PSII associated light-harvesting complex II | 1.20E-03 |
| 13 | GO:0005829: cytosol | 1.22E-03 |
| 14 | GO:0016591: DNA-directed RNA polymerase II, holoenzyme | 1.52E-03 |
| 15 | GO:0032588: trans-Golgi network membrane | 1.87E-03 |
| 16 | GO:0009941: chloroplast envelope | 2.74E-03 |
| 17 | GO:0045273: respiratory chain complex II | 3.06E-03 |
| 18 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 3.06E-03 |
| 19 | GO:0005811: lipid particle | 3.50E-03 |
| 20 | GO:0042644: chloroplast nucleoid | 3.95E-03 |
| 21 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.95E-03 |
| 22 | GO:0016604: nuclear body | 4.44E-03 |
| 23 | GO:0000418: DNA-directed RNA polymerase IV complex | 4.93E-03 |
| 24 | GO:0005665: DNA-directed RNA polymerase II, core complex | 5.98E-03 |
| 25 | GO:0031969: chloroplast membrane | 6.06E-03 |
| 26 | GO:0005739: mitochondrion | 7.09E-03 |
| 27 | GO:0005750: mitochondrial respiratory chain complex III | 7.11E-03 |
| 28 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 7.69E-03 |
| 29 | GO:0005747: mitochondrial respiratory chain complex I | 7.86E-03 |
| 30 | GO:0000419: DNA-directed RNA polymerase V complex | 8.30E-03 |
| 31 | GO:0009706: chloroplast inner membrane | 9.16E-03 |
| 32 | GO:0045271: respiratory chain complex I | 9.56E-03 |
| 33 | GO:0070469: respiratory chain | 9.56E-03 |
| 34 | GO:0042651: thylakoid membrane | 9.56E-03 |
| 35 | GO:0015935: small ribosomal subunit | 1.02E-02 |
| 36 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.23E-02 |
| 37 | GO:0009570: chloroplast stroma | 1.58E-02 |
| 38 | GO:0009523: photosystem II | 1.60E-02 |
| 39 | GO:0005778: peroxisomal membrane | 2.01E-02 |
| 40 | GO:0009295: nucleoid | 2.01E-02 |
| 41 | GO:0016021: integral component of membrane | 2.34E-02 |
| 42 | GO:0005777: peroxisome | 2.45E-02 |
| 43 | GO:0009707: chloroplast outer membrane | 2.64E-02 |
| 44 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.70E-02 |
| 45 | GO:0000325: plant-type vacuole | 2.93E-02 |
| 46 | GO:0031966: mitochondrial membrane | 4.40E-02 |