Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G10560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034775: glutathione transmembrane transport0.00E+00
2GO:0055091: phospholipid homeostasis0.00E+00
3GO:0071475: cellular hyperosmotic salinity response0.00E+00
4GO:0035024: negative regulation of Rho protein signal transduction0.00E+00
5GO:0080021: response to benzoic acid0.00E+00
6GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process0.00E+00
7GO:0019593: mannitol biosynthetic process0.00E+00
8GO:0070328: triglyceride homeostasis0.00E+00
9GO:0009873: ethylene-activated signaling pathway1.62E-07
10GO:0010200: response to chitin1.08E-06
11GO:0006355: regulation of transcription, DNA-templated2.32E-06
12GO:0006351: transcription, DNA-templated8.48E-05
13GO:0006751: glutathione catabolic process1.99E-04
14GO:0001944: vasculature development3.10E-04
15GO:0030974: thiamine pyrophosphate transport3.84E-04
16GO:0009865: pollen tube adhesion3.84E-04
17GO:0006680: glucosylceramide catabolic process3.84E-04
18GO:0090421: embryonic meristem initiation3.84E-04
19GO:1902265: abscisic acid homeostasis3.84E-04
20GO:0051180: vitamin transport3.84E-04
21GO:0046938: phytochelatin biosynthetic process3.84E-04
22GO:0009819: drought recovery4.35E-04
23GO:0045489: pectin biosynthetic process4.72E-04
24GO:0098656: anion transmembrane transport6.38E-04
25GO:0019760: glucosinolate metabolic process7.90E-04
26GO:0006898: receptor-mediated endocytosis8.33E-04
27GO:0015893: drug transport8.33E-04
28GO:1901679: nucleotide transmembrane transport8.33E-04
29GO:0015786: UDP-glucose transport8.33E-04
30GO:0010507: negative regulation of autophagy8.33E-04
31GO:0031407: oxylipin metabolic process8.33E-04
32GO:0010289: homogalacturonan biosynthetic process8.33E-04
33GO:0055088: lipid homeostasis8.33E-04
34GO:0009751: response to salicylic acid8.33E-04
35GO:0052544: defense response by callose deposition in cell wall1.01E-03
36GO:0009624: response to nematode1.10E-03
37GO:0042344: indole glucosinolate catabolic process1.35E-03
38GO:0044210: 'de novo' CTP biosynthetic process1.35E-03
39GO:0080121: AMP transport1.35E-03
40GO:0046786: viral replication complex formation and maintenance1.35E-03
41GO:0016045: detection of bacterium1.35E-03
42GO:0010359: regulation of anion channel activity1.35E-03
43GO:0010288: response to lead ion1.35E-03
44GO:0090630: activation of GTPase activity1.35E-03
45GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid1.35E-03
46GO:0015783: GDP-fucose transport1.35E-03
47GO:0010325: raffinose family oligosaccharide biosynthetic process1.35E-03
48GO:0070588: calcium ion transmembrane transport1.65E-03
49GO:0015700: arsenite transport1.95E-03
50GO:0080024: indolebutyric acid metabolic process1.95E-03
51GO:0055089: fatty acid homeostasis1.95E-03
52GO:0010371: regulation of gibberellin biosynthetic process1.95E-03
53GO:0070301: cellular response to hydrogen peroxide1.95E-03
54GO:0072334: UDP-galactose transmembrane transport1.95E-03
55GO:0031408: oxylipin biosynthetic process2.47E-03
56GO:0045490: pectin catabolic process2.54E-03
57GO:0015867: ATP transport2.62E-03
58GO:0042991: transcription factor import into nucleus2.62E-03
59GO:1902347: response to strigolactone2.62E-03
60GO:0009687: abscisic acid metabolic process2.62E-03
61GO:0046345: abscisic acid catabolic process2.62E-03
62GO:0015689: molybdate ion transport2.62E-03
63GO:0051365: cellular response to potassium ion starvation2.62E-03
64GO:0022622: root system development2.62E-03
65GO:0009737: response to abscisic acid2.64E-03
66GO:0009611: response to wounding2.78E-03
67GO:0009823: cytokinin catabolic process3.35E-03
68GO:0006656: phosphatidylcholine biosynthetic process3.35E-03
69GO:0006873: cellular ion homeostasis3.35E-03
70GO:0048497: maintenance of floral organ identity3.35E-03
71GO:0006665: sphingolipid metabolic process3.35E-03
72GO:0032957: inositol trisphosphate metabolic process3.35E-03
73GO:0070897: DNA-templated transcriptional preinitiation complex assembly3.35E-03
74GO:0009697: salicylic acid biosynthetic process3.35E-03
75GO:0042538: hyperosmotic salinity response3.43E-03
76GO:0042631: cellular response to water deprivation3.75E-03
77GO:0047484: regulation of response to osmotic stress4.14E-03
78GO:0035435: phosphate ion transmembrane transport4.14E-03
79GO:1900425: negative regulation of defense response to bacterium4.14E-03
80GO:0010337: regulation of salicylic acid metabolic process4.14E-03
81GO:0015866: ADP transport4.14E-03
82GO:0048367: shoot system development4.83E-03
83GO:0045926: negative regulation of growth4.99E-03
84GO:2000033: regulation of seed dormancy process4.99E-03
85GO:0010016: shoot system morphogenesis4.99E-03
86GO:0098655: cation transmembrane transport4.99E-03
87GO:1901001: negative regulation of response to salt stress4.99E-03
88GO:0042545: cell wall modification5.66E-03
89GO:0010103: stomatal complex morphogenesis5.89E-03
90GO:0032880: regulation of protein localization5.89E-03
91GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.89E-03
92GO:0006955: immune response5.89E-03
93GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway5.89E-03
94GO:0009639: response to red or far red light6.06E-03
95GO:0042255: ribosome assembly6.85E-03
96GO:0006353: DNA-templated transcription, termination6.85E-03
97GO:0009690: cytokinin metabolic process6.85E-03
98GO:2000070: regulation of response to water deprivation6.85E-03
99GO:0007155: cell adhesion6.85E-03
100GO:0009061: anaerobic respiration6.85E-03
101GO:0009938: negative regulation of gibberellic acid mediated signaling pathway6.85E-03
102GO:0009880: embryonic pattern specification7.86E-03
103GO:0009827: plant-type cell wall modification7.86E-03
104GO:0090305: nucleic acid phosphodiester bond hydrolysis8.92E-03
105GO:0001708: cell fate specification8.92E-03
106GO:0046685: response to arsenic-containing substance8.92E-03
107GO:0006098: pentose-phosphate shunt8.92E-03
108GO:0009790: embryo development9.55E-03
109GO:0007346: regulation of mitotic cell cycle1.00E-02
110GO:0010018: far-red light signaling pathway1.00E-02
111GO:0048268: clathrin coat assembly1.00E-02
112GO:0042761: very long-chain fatty acid biosynthetic process1.00E-02
113GO:2000280: regulation of root development1.00E-02
114GO:0006811: ion transport1.04E-02
115GO:0006979: response to oxidative stress1.08E-02
116GO:0009641: shade avoidance1.12E-02
117GO:0010629: negative regulation of gene expression1.12E-02
118GO:0055062: phosphate ion homeostasis1.12E-02
119GO:0019538: protein metabolic process1.12E-02
120GO:0016051: carbohydrate biosynthetic process1.20E-02
121GO:0030148: sphingolipid biosynthetic process1.24E-02
122GO:0009698: phenylpropanoid metabolic process1.24E-02
123GO:0048364: root development1.32E-02
124GO:0010105: negative regulation of ethylene-activated signaling pathway1.37E-02
125GO:0000266: mitochondrial fission1.37E-02
126GO:0006839: mitochondrial transport1.37E-02
127GO:0006470: protein dephosphorylation1.40E-02
128GO:0006897: endocytosis1.43E-02
129GO:0006631: fatty acid metabolic process1.43E-02
130GO:0010468: regulation of gene expression1.48E-02
131GO:0030048: actin filament-based movement1.49E-02
132GO:0050826: response to freezing1.49E-02
133GO:0018107: peptidyl-threonine phosphorylation1.49E-02
134GO:0005986: sucrose biosynthetic process1.49E-02
135GO:2000012: regulation of auxin polar transport1.49E-02
136GO:0051707: response to other organism1.55E-02
137GO:0048467: gynoecium development1.63E-02
138GO:0010030: positive regulation of seed germination1.77E-02
139GO:0010167: response to nitrate1.77E-02
140GO:0010025: wax biosynthetic process1.91E-02
141GO:0042753: positive regulation of circadian rhythm1.91E-02
142GO:0006636: unsaturated fatty acid biosynthetic process1.91E-02
143GO:0009833: plant-type primary cell wall biogenesis1.91E-02
144GO:0010187: negative regulation of seed germination2.05E-02
145GO:2000377: regulation of reactive oxygen species metabolic process2.05E-02
146GO:0009863: salicylic acid mediated signaling pathway2.05E-02
147GO:0009695: jasmonic acid biosynthetic process2.20E-02
148GO:0051321: meiotic cell cycle2.36E-02
149GO:0080092: regulation of pollen tube growth2.51E-02
150GO:0071215: cellular response to abscisic acid stimulus2.67E-02
151GO:0080167: response to karrikin2.70E-02
152GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.81E-02
153GO:0010584: pollen exine formation2.84E-02
154GO:0048443: stamen development2.84E-02
155GO:0009414: response to water deprivation2.90E-02
156GO:0008284: positive regulation of cell proliferation3.01E-02
157GO:0070417: cellular response to cold3.01E-02
158GO:0071555: cell wall organization3.02E-02
159GO:0006468: protein phosphorylation3.04E-02
160GO:0018105: peptidyl-serine phosphorylation3.08E-02
161GO:0035556: intracellular signal transduction3.16E-02
162GO:0000271: polysaccharide biosynthetic process3.18E-02
163GO:0000226: microtubule cytoskeleton organization3.18E-02
164GO:0010154: fruit development3.35E-02
165GO:0006520: cellular amino acid metabolic process3.35E-02
166GO:0048868: pollen tube development3.35E-02
167GO:0010268: brassinosteroid homeostasis3.35E-02
168GO:0009960: endosperm development3.35E-02
169GO:0009958: positive gravitropism3.35E-02
170GO:0045892: negative regulation of transcription, DNA-templated3.44E-02
171GO:0000398: mRNA splicing, via spliceosome3.45E-02
172GO:0030154: cell differentiation3.48E-02
173GO:0008654: phospholipid biosynthetic process3.71E-02
174GO:0010183: pollen tube guidance3.71E-02
175GO:0010193: response to ozone3.89E-02
176GO:0000302: response to reactive oxygen species3.89E-02
177GO:0006891: intra-Golgi vesicle-mediated transport3.89E-02
178GO:0016132: brassinosteroid biosynthetic process3.89E-02
179GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.89E-02
180GO:0032502: developmental process4.08E-02
181GO:0055085: transmembrane transport4.13E-02
182GO:1901657: glycosyl compound metabolic process4.27E-02
183GO:0016125: sterol metabolic process4.46E-02
184GO:0006904: vesicle docking involved in exocytosis4.66E-02
185GO:0008152: metabolic process4.91E-02
RankGO TermAdjusted P value
1GO:0008419: RNA lariat debranching enzyme activity0.00E+00
2GO:0042171: lysophosphatidic acid acyltransferase activity0.00E+00
3GO:0004698: calcium-dependent protein kinase C activity0.00E+00
4GO:0017048: Rho GTPase binding0.00E+00
5GO:0003700: transcription factor activity, sequence-specific DNA binding4.16E-06
6GO:0016629: 12-oxophytodienoate reductase activity6.59E-06
7GO:0003883: CTP synthase activity5.04E-05
8GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity5.04E-05
9GO:0044212: transcription regulatory region DNA binding9.61E-05
10GO:0043565: sequence-specific DNA binding1.10E-04
11GO:0052631: sphingolipid delta-8 desaturase activity3.84E-04
12GO:0052638: indole-3-butyrate beta-glucosyltransferase activity3.84E-04
13GO:0004348: glucosylceramidase activity3.84E-04
14GO:0071992: phytochelatin transmembrane transporter activity3.84E-04
15GO:0090422: thiamine pyrophosphate transporter activity3.84E-04
16GO:0004105: choline-phosphate cytidylyltransferase activity3.84E-04
17GO:0046870: cadmium ion binding3.84E-04
18GO:0015446: ATPase-coupled arsenite transmembrane transporter activity3.84E-04
19GO:0003677: DNA binding4.08E-04
20GO:0010181: FMN binding5.19E-04
21GO:0017022: myosin binding8.33E-04
22GO:0004103: choline kinase activity8.33E-04
23GO:0001047: core promoter binding8.33E-04
24GO:0042389: omega-3 fatty acid desaturase activity8.33E-04
25GO:0017040: ceramidase activity8.33E-04
26GO:0003839: gamma-glutamylcyclotransferase activity8.33E-04
27GO:0003958: NADPH-hemoprotein reductase activity8.33E-04
28GO:0080043: quercetin 3-O-glucosyltransferase activity9.63E-04
29GO:0080044: quercetin 7-O-glucosyltransferase activity9.63E-04
30GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity1.35E-03
31GO:0010295: (+)-abscisic acid 8'-hydroxylase activity1.35E-03
32GO:0003840: gamma-glutamyltransferase activity1.35E-03
33GO:0036374: glutathione hydrolase activity1.35E-03
34GO:0004383: guanylate cyclase activity1.35E-03
35GO:0005457: GDP-fucose transmembrane transporter activity1.35E-03
36GO:0047325: inositol tetrakisphosphate 1-kinase activity1.35E-03
37GO:0047274: galactinol-sucrose galactosyltransferase activity1.35E-03
38GO:0008083: growth factor activity1.47E-03
39GO:0005460: UDP-glucose transmembrane transporter activity1.95E-03
40GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity1.95E-03
41GO:0001653: peptide receptor activity1.95E-03
42GO:0015098: molybdate ion transmembrane transporter activity2.62E-03
43GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity2.62E-03
44GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.70E-03
45GO:0080122: AMP transmembrane transporter activity3.35E-03
46GO:0004623: phospholipase A2 activity3.35E-03
47GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.35E-03
48GO:0010294: abscisic acid glucosyltransferase activity3.35E-03
49GO:0005459: UDP-galactose transmembrane transporter activity3.35E-03
50GO:0019139: cytokinin dehydrogenase activity3.35E-03
51GO:0045330: aspartyl esterase activity4.27E-03
52GO:0005347: ATP transmembrane transporter activity4.99E-03
53GO:0015217: ADP transmembrane transporter activity4.99E-03
54GO:0030599: pectinesterase activity5.45E-03
55GO:0004143: diacylglycerol kinase activity5.89E-03
56GO:0016621: cinnamoyl-CoA reductase activity5.89E-03
57GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity6.44E-03
58GO:0016209: antioxidant activity6.85E-03
59GO:0016758: transferase activity, transferring hexosyl groups7.57E-03
60GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water7.86E-03
61GO:0008308: voltage-gated anion channel activity7.86E-03
62GO:0000989: transcription factor activity, transcription factor binding8.92E-03
63GO:0005096: GTPase activator activity9.95E-03
64GO:0004722: protein serine/threonine phosphatase activity1.04E-02
65GO:0015297: antiporter activity1.11E-02
66GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity1.12E-02
67GO:0005545: 1-phosphatidylinositol binding1.12E-02
68GO:0005543: phospholipid binding1.24E-02
69GO:0008194: UDP-glycosyltransferase activity1.36E-02
70GO:0005315: inorganic phosphate transmembrane transporter activity1.49E-02
71GO:0005262: calcium channel activity1.49E-02
72GO:0019888: protein phosphatase regulator activity1.49E-02
73GO:0015114: phosphate ion transmembrane transporter activity1.49E-02
74GO:0005388: calcium-transporting ATPase activity1.49E-02
75GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.63E-02
76GO:0003774: motor activity1.63E-02
77GO:0017025: TBP-class protein binding1.77E-02
78GO:0008146: sulfotransferase activity1.77E-02
79GO:0004857: enzyme inhibitor activity2.05E-02
80GO:0046872: metal ion binding2.19E-02
81GO:0035251: UDP-glucosyltransferase activity2.36E-02
82GO:0004707: MAP kinase activity2.36E-02
83GO:0030570: pectate lyase activity2.67E-02
84GO:0003727: single-stranded RNA binding2.84E-02
85GO:0008514: organic anion transmembrane transporter activity2.84E-02
86GO:0016301: kinase activity3.33E-02
87GO:0030276: clathrin binding3.35E-02
88GO:0004518: nuclease activity4.08E-02
89GO:0004674: protein serine/threonine kinase activity4.59E-02
90GO:0016722: oxidoreductase activity, oxidizing metal ions4.66E-02
91GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.79E-02
92GO:0046910: pectinesterase inhibitor activity4.79E-02
93GO:0016597: amino acid binding4.85E-02
94GO:0016413: O-acetyltransferase activity4.85E-02
RankGO TermAdjusted P value
1GO:0070382: exocytic vesicle3.84E-04
2GO:0042170: plastid membrane8.33E-04
3GO:0030133: transport vesicle8.33E-04
4GO:0005622: intracellular8.55E-04
5GO:0045177: apical part of cell1.95E-03
6GO:0005905: clathrin-coated pit2.47E-03
7GO:0030136: clathrin-coated vesicle3.47E-03
8GO:0043231: intracellular membrane-bounded organelle3.93E-03
9GO:0000793: condensed chromosome4.14E-03
10GO:0000794: condensed nuclear chromosome5.89E-03
11GO:0016604: nuclear body1.00E-02
12GO:0000159: protein phosphatase type 2A complex1.24E-02
13GO:0005618: cell wall1.26E-02
14GO:0005938: cell cortex1.49E-02
15GO:0009508: plastid chromosome1.49E-02
16GO:0046658: anchored component of plasma membrane1.69E-02
17GO:0005795: Golgi stack1.77E-02
18GO:0005768: endosome2.53E-02
19GO:0016607: nuclear speck2.56E-02
20GO:0005743: mitochondrial inner membrane3.99E-02
21GO:0000145: exocyst4.08E-02
22GO:0009505: plant-type cell wall4.37E-02
23GO:0009295: nucleoid4.66E-02
24GO:0005634: nucleus4.91E-02
25GO:0000139: Golgi membrane4.95E-02
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Gene type



Gene DE type