Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G10500

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
2GO:0015746: citrate transport0.00E+00
3GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase0.00E+00
4GO:0001881: receptor recycling0.00E+00
5GO:0048870: cell motility0.00E+00
6GO:0006593: ornithine catabolic process0.00E+00
7GO:0006511: ubiquitin-dependent protein catabolic process1.78E-11
8GO:0051603: proteolysis involved in cellular protein catabolic process7.90E-05
9GO:0010099: regulation of photomorphogenesis1.42E-04
10GO:0031539: positive regulation of anthocyanin metabolic process1.56E-04
11GO:0031468: nuclear envelope reassembly1.56E-04
12GO:0009852: auxin catabolic process1.56E-04
13GO:0019544: arginine catabolic process to glutamate1.56E-04
14GO:0010043: response to zinc ion3.23E-04
15GO:0009915: phloem sucrose loading3.55E-04
16GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex3.55E-04
17GO:0007163: establishment or maintenance of cell polarity3.55E-04
18GO:0006432: phenylalanyl-tRNA aminoacylation3.55E-04
19GO:0043132: NAD transport3.55E-04
20GO:0009853: photorespiration3.64E-04
21GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.18E-04
22GO:0008333: endosome to lysosome transport5.82E-04
23GO:0051646: mitochondrion localization5.82E-04
24GO:0044375: regulation of peroxisome size5.82E-04
25GO:0045793: positive regulation of cell size5.82E-04
26GO:0006760: folic acid-containing compound metabolic process5.82E-04
27GO:0006487: protein N-linked glycosylation5.84E-04
28GO:0006107: oxaloacetate metabolic process8.33E-04
29GO:0015858: nucleoside transport8.33E-04
30GO:0009963: positive regulation of flavonoid biosynthetic process8.33E-04
31GO:1901332: negative regulation of lateral root development8.33E-04
32GO:0032877: positive regulation of DNA endoreduplication8.33E-04
33GO:0046836: glycolipid transport8.33E-04
34GO:0010363: regulation of plant-type hypersensitive response1.10E-03
35GO:0006221: pyrimidine nucleotide biosynthetic process1.10E-03
36GO:0032366: intracellular sterol transport1.10E-03
37GO:0044205: 'de novo' UMP biosynthetic process1.10E-03
38GO:0015976: carbon utilization1.10E-03
39GO:0051781: positive regulation of cell division1.10E-03
40GO:0006662: glycerol ether metabolic process1.13E-03
41GO:0030041: actin filament polymerization1.40E-03
42GO:0043248: proteasome assembly1.72E-03
43GO:0006561: proline biosynthetic process1.72E-03
44GO:0006777: Mo-molybdopterin cofactor biosynthetic process1.72E-03
45GO:0010189: vitamin E biosynthetic process2.06E-03
46GO:0009816: defense response to bacterium, incompatible interaction2.11E-03
47GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process2.42E-03
48GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c2.42E-03
49GO:0010044: response to aluminum ion2.42E-03
50GO:0009787: regulation of abscisic acid-activated signaling pathway2.80E-03
51GO:0006506: GPI anchor biosynthetic process2.80E-03
52GO:0000028: ribosomal small subunit assembly2.80E-03
53GO:0045010: actin nucleation2.80E-03
54GO:0016559: peroxisome fission2.80E-03
55GO:0022900: electron transport chain3.21E-03
56GO:0015996: chlorophyll catabolic process3.21E-03
57GO:0034599: cellular response to oxidative stress3.42E-03
58GO:0006099: tricarboxylic acid cycle3.42E-03
59GO:0006754: ATP biosynthetic process3.63E-03
60GO:0000902: cell morphogenesis3.63E-03
61GO:0000103: sulfate assimilation4.52E-03
62GO:0043069: negative regulation of programmed cell death4.52E-03
63GO:0042538: hyperosmotic salinity response5.28E-03
64GO:0006790: sulfur compound metabolic process5.48E-03
65GO:0009585: red, far-red light phototransduction5.66E-03
66GO:0006807: nitrogen compound metabolic process5.98E-03
67GO:0009691: cytokinin biosynthetic process5.98E-03
68GO:0006108: malate metabolic process5.98E-03
69GO:0045454: cell redox homeostasis6.48E-03
70GO:0007034: vacuolar transport6.50E-03
71GO:0009266: response to temperature stimulus6.50E-03
72GO:0007031: peroxisome organization7.04E-03
73GO:0007030: Golgi organization7.04E-03
74GO:0010039: response to iron ion7.04E-03
75GO:0042753: positive regulation of circadian rhythm7.59E-03
76GO:0006636: unsaturated fatty acid biosynthetic process7.59E-03
77GO:0006406: mRNA export from nucleus8.16E-03
78GO:0016575: histone deacetylation8.74E-03
79GO:0061077: chaperone-mediated protein folding9.34E-03
80GO:0048511: rhythmic process9.34E-03
81GO:0010431: seed maturation9.34E-03
82GO:0010017: red or far-red light signaling pathway9.96E-03
83GO:0016226: iron-sulfur cluster assembly9.96E-03
84GO:0009294: DNA mediated transformation1.06E-02
85GO:0006012: galactose metabolic process1.06E-02
86GO:0042147: retrograde transport, endosome to Golgi1.19E-02
87GO:0034220: ion transmembrane transport1.25E-02
88GO:0015991: ATP hydrolysis coupled proton transport1.25E-02
89GO:0009734: auxin-activated signaling pathway1.31E-02
90GO:0010154: fruit development1.32E-02
91GO:0009958: positive gravitropism1.32E-02
92GO:0015986: ATP synthesis coupled proton transport1.39E-02
93GO:0061025: membrane fusion1.39E-02
94GO:0006623: protein targeting to vacuole1.46E-02
95GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.54E-02
96GO:0055114: oxidation-reduction process1.64E-02
97GO:0010090: trichome morphogenesis1.68E-02
98GO:0010252: auxin homeostasis1.76E-02
99GO:0000910: cytokinesis1.92E-02
100GO:0006810: transport2.11E-02
101GO:0046686: response to cadmium ion2.31E-02
102GO:0009817: defense response to fungus, incompatible interaction2.41E-02
103GO:0008219: cell death2.41E-02
104GO:0010311: lateral root formation2.50E-02
105GO:0009651: response to salt stress2.55E-02
106GO:0006499: N-terminal protein myristoylation2.58E-02
107GO:0010218: response to far red light2.58E-02
108GO:0009631: cold acclimation2.67E-02
109GO:0009910: negative regulation of flower development2.67E-02
110GO:0000724: double-strand break repair via homologous recombination2.76E-02
111GO:0006839: mitochondrial transport3.13E-02
112GO:0006631: fatty acid metabolic process3.22E-02
113GO:0009640: photomorphogenesis3.42E-02
114GO:0010114: response to red light3.42E-02
115GO:0009926: auxin polar transport3.42E-02
116GO:0000209: protein polyubiquitination3.51E-02
117GO:0009965: leaf morphogenesis3.71E-02
118GO:0006855: drug transmembrane transport3.81E-02
119GO:0016042: lipid catabolic process3.85E-02
120GO:0031347: regulation of defense response3.91E-02
121GO:0006486: protein glycosylation4.22E-02
122GO:0010224: response to UV-B4.33E-02
123GO:0009733: response to auxin4.86E-02
124GO:0009626: plant-type hypersensitive response4.97E-02
RankGO TermAdjusted P value
1GO:0050152: omega-amidase activity0.00E+00
2GO:0004151: dihydroorotase activity0.00E+00
3GO:0033961: cis-stilbene-oxide hydrolase activity0.00E+00
4GO:0032441: pheophorbide a oxygenase activity0.00E+00
5GO:0010176: homogentisate phytyltransferase activity0.00E+00
6GO:0044610: FMN transmembrane transporter activity0.00E+00
7GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity0.00E+00
8GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
9GO:0004298: threonine-type endopeptidase activity3.11E-24
10GO:0008233: peptidase activity4.65E-12
11GO:0004576: oligosaccharyl transferase activity1.93E-05
12GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity3.14E-05
13GO:0015230: FAD transmembrane transporter activity1.56E-04
14GO:0015137: citrate transmembrane transporter activity1.56E-04
15GO:0004129: cytochrome-c oxidase activity2.86E-04
16GO:0051724: NAD transporter activity3.55E-04
17GO:0004826: phenylalanine-tRNA ligase activity3.55E-04
18GO:0015228: coenzyme A transmembrane transporter activity3.55E-04
19GO:0010277: chlorophyllide a oxygenase [overall] activity5.82E-04
20GO:0005047: signal recognition particle binding5.82E-04
21GO:0032403: protein complex binding5.82E-04
22GO:0017089: glycolipid transporter activity8.33E-04
23GO:0047134: protein-disulfide reductase activity9.79E-04
24GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds1.10E-03
25GO:0050302: indole-3-acetaldehyde oxidase activity1.10E-03
26GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor1.10E-03
27GO:0004301: epoxide hydrolase activity1.10E-03
28GO:0004659: prenyltransferase activity1.10E-03
29GO:0010011: auxin binding1.10E-03
30GO:0051861: glycolipid binding1.10E-03
31GO:0015035: protein disulfide oxidoreductase activity1.18E-03
32GO:0004791: thioredoxin-disulfide reductase activity1.21E-03
33GO:0008137: NADH dehydrogenase (ubiquinone) activity1.39E-03
34GO:0080122: AMP transmembrane transporter activity1.40E-03
35GO:0005496: steroid binding1.40E-03
36GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.58E-03
37GO:0051117: ATPase binding1.72E-03
38GO:0051213: dioxygenase activity1.99E-03
39GO:0005347: ATP transmembrane transporter activity2.06E-03
40GO:0015217: ADP transmembrane transporter activity2.06E-03
41GO:0008121: ubiquinol-cytochrome-c reductase activity2.42E-03
42GO:0004034: aldose 1-epimerase activity2.80E-03
43GO:0042802: identical protein binding3.06E-03
44GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)3.21E-03
45GO:0009672: auxin:proton symporter activity4.06E-03
46GO:0008794: arsenate reductase (glutaredoxin) activity4.99E-03
47GO:0046961: proton-transporting ATPase activity, rotational mechanism4.99E-03
48GO:0000049: tRNA binding5.48E-03
49GO:0004089: carbonate dehydratase activity5.98E-03
50GO:0004175: endopeptidase activity6.50E-03
51GO:0022857: transmembrane transporter activity7.59E-03
52GO:0004407: histone deacetylase activity8.16E-03
53GO:0043130: ubiquitin binding8.16E-03
54GO:0005528: FK506 binding8.16E-03
55GO:0051536: iron-sulfur cluster binding8.16E-03
56GO:0004540: ribonuclease activity9.34E-03
57GO:0008080: N-acetyltransferase activity1.32E-02
58GO:0046933: proton-transporting ATP synthase activity, rotational mechanism1.32E-02
59GO:0015297: antiporter activity1.33E-02
60GO:0004872: receptor activity1.46E-02
61GO:0016597: amino acid binding1.92E-02
62GO:0015250: water channel activity1.99E-02
63GO:0016788: hydrolase activity, acting on ester bonds2.21E-02
64GO:0015238: drug transmembrane transporter activity2.50E-02
65GO:0050897: cobalt ion binding2.67E-02
66GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.85E-02
67GO:0052689: carboxylic ester hydrolase activity2.97E-02
68GO:0051539: 4 iron, 4 sulfur cluster binding3.13E-02
69GO:0051537: 2 iron, 2 sulfur cluster binding3.61E-02
70GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.81E-02
71GO:0009055: electron carrier activity4.24E-02
72GO:0003690: double-stranded DNA binding4.33E-02
73GO:0016298: lipase activity4.33E-02
74GO:0031625: ubiquitin protein ligase binding4.54E-02
RankGO TermAdjusted P value
1GO:0097361: CIA complex0.00E+00
2GO:0005839: proteasome core complex3.11E-24
3GO:0000502: proteasome complex2.02E-23
4GO:0019773: proteasome core complex, alpha-subunit complex7.39E-16
5GO:0005829: cytosol5.21E-10
6GO:0005747: mitochondrial respiratory chain complex I9.31E-09
7GO:0005774: vacuolar membrane1.40E-05
8GO:0045271: respiratory chain complex I3.10E-05
9GO:0005746: mitochondrial respiratory chain3.14E-05
10GO:0008250: oligosaccharyltransferase complex3.14E-05
11GO:0005773: vacuole7.89E-05
12GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)1.13E-04
13GO:0045273: respiratory chain complex II1.13E-04
14GO:0005779: integral component of peroxisomal membrane1.42E-04
15GO:0019774: proteasome core complex, beta-subunit complex1.56E-04
16GO:0046861: glyoxysomal membrane5.82E-04
17GO:0005838: proteasome regulatory particle5.82E-04
18GO:0031966: mitochondrial membrane6.72E-04
19GO:0033180: proton-transporting V-type ATPase, V1 domain8.33E-04
20GO:1990726: Lsm1-7-Pat1 complex8.33E-04
21GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)1.10E-03
22GO:0005737: cytoplasm1.41E-03
23GO:0030904: retromer complex1.72E-03
24GO:0031209: SCAR complex1.72E-03
25GO:0005771: multivesicular body1.72E-03
26GO:0005778: peroxisomal membrane1.78E-03
27GO:0005788: endoplasmic reticulum lumen2.11E-03
28GO:0005688: U6 snRNP2.80E-03
29GO:0009514: glyoxysome3.21E-03
30GO:0046540: U4/U6 x U5 tri-snRNP complex3.21E-03
31GO:0005763: mitochondrial small ribosomal subunit3.63E-03
32GO:0022626: cytosolic ribosome3.81E-03
33GO:0071011: precatalytic spliceosome4.06E-03
34GO:0008541: proteasome regulatory particle, lid subcomplex4.99E-03
35GO:0071013: catalytic step 2 spliceosome4.99E-03
36GO:0005783: endoplasmic reticulum5.12E-03
37GO:0005739: mitochondrion6.38E-03
38GO:0005750: mitochondrial respiratory chain complex III6.50E-03
39GO:0005753: mitochondrial proton-transporting ATP synthase complex7.04E-03
40GO:0005732: small nucleolar ribonucleoprotein complex8.79E-03
41GO:0005759: mitochondrial matrix1.27E-02
42GO:0071944: cell periphery1.68E-02
43GO:0000932: P-body1.99E-02
44GO:0005777: peroxisome2.09E-02
45GO:0005819: spindle3.04E-02
46GO:0031902: late endosome membrane3.22E-02
47GO:0005856: cytoskeleton3.71E-02
48GO:0005834: heterotrimeric G-protein complex4.97E-02
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Gene type



Gene DE type