co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G10090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process	0.00E+00
2	GO:0051562: negative regulation of mitochondrial calcium ion concentration	0.00E+00
3	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
4	GO:0009414: response to water deprivation	2.15E-08
5	GO:0009873: ethylene-activated signaling pathway	1.57E-06
6	GO:0010200: response to chitin	1.58E-06
7	GO:0009415: response to water	6.06E-06
8	GO:0009737: response to abscisic acid	1.04E-05
9	GO:0009631: cold acclimation	9.37E-05
10	GO:0035435: phosphate ion transmembrane transport	1.13E-04
11	GO:0006355: regulation of transcription, DNA-templated	1.52E-04
12	GO:0009409: response to cold	1.92E-04
13	GO:0009611: response to wounding	2.40E-04
14	GO:0009609: response to symbiotic bacterium	2.70E-04
15	GO:1902265: abscisic acid homeostasis	2.70E-04
16	GO:0051180: vitamin transport	2.70E-04
17	GO:0030974: thiamine pyrophosphate transport	2.70E-04
18	GO:0009865: pollen tube adhesion	2.70E-04
19	GO:0050691: regulation of defense response to virus by host	2.70E-04
20	GO:0006680: glucosylceramide catabolic process	2.70E-04
21	GO:0010286: heat acclimation	4.43E-04
22	GO:0010507: negative regulation of autophagy	5.94E-04
23	GO:0015709: thiosulfate transport	5.94E-04
24	GO:0071422: succinate transmembrane transport	5.94E-04
25	GO:0031407: oxylipin metabolic process	5.94E-04
26	GO:0010289: homogalacturonan biosynthetic process	5.94E-04
27	GO:0006898: receptor-mediated endocytosis	5.94E-04
28	GO:0015893: drug transport	5.94E-04
29	GO:1901679: nucleotide transmembrane transport	5.94E-04
30	GO:0015786: UDP-glucose transport	5.94E-04
31	GO:0052544: defense response by callose deposition in cell wall	6.14E-04
32	GO:0006811: ion transport	8.15E-04
33	GO:0009790: embryo development	8.97E-04
34	GO:0090630: activation of GTPase activity	9.62E-04
35	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	9.62E-04
36	GO:0015783: GDP-fucose transport	9.62E-04
37	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	9.62E-04
38	GO:0006473: protein acetylation	9.62E-04
39	GO:0042344: indole glucosinolate catabolic process	9.62E-04
40	GO:0080121: AMP transport	9.62E-04
41	GO:0016045: detection of bacterium	9.62E-04
42	GO:0010359: regulation of anion channel activity	9.62E-04
43	GO:0070588: calcium ion transmembrane transport	9.99E-04
44	GO:0006839: mitochondrial transport	1.14E-03
45	GO:0006351: transcription, DNA-templated	1.15E-03
46	GO:0010371: regulation of gibberellin biosynthetic process	1.38E-03
47	GO:0015729: oxaloacetate transport	1.38E-03
48	GO:0072334: UDP-galactose transmembrane transport	1.38E-03
49	GO:0031408: oxylipin biosynthetic process	1.48E-03
50	GO:0001944: vasculature development	1.76E-03
51	GO:0042538: hyperosmotic salinity response	1.77E-03
52	GO:1902347: response to strigolactone	1.84E-03
53	GO:0009687: abscisic acid metabolic process	1.84E-03
54	GO:0046345: abscisic acid catabolic process	1.84E-03
55	GO:0022622: root system development	1.84E-03
56	GO:0006221: pyrimidine nucleotide biosynthetic process	1.84E-03
57	GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain	1.84E-03
58	GO:0015867: ATP transport	1.84E-03
59	GO:0048497: maintenance of floral organ identity	2.35E-03
60	GO:0051225: spindle assembly	2.35E-03
61	GO:0006665: sphingolipid metabolic process	2.35E-03
62	GO:0009247: glycolipid biosynthetic process	2.35E-03
63	GO:0070897: DNA-templated transcriptional preinitiation complex assembly	2.35E-03
64	GO:0071423: malate transmembrane transport	2.35E-03
65	GO:0006873: cellular ion homeostasis	2.35E-03
66	GO:0006970: response to osmotic stress	2.50E-03
67	GO:0009749: response to glucose	2.79E-03
68	GO:0015866: ADP transport	2.90E-03
69	GO:0047484: regulation of response to osmotic stress	2.90E-03
70	GO:1900425: negative regulation of defense response to bacterium	2.90E-03
71	GO:0010555: response to mannitol	3.49E-03
72	GO:1901001: negative regulation of response to salt stress	3.49E-03
73	GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity	3.49E-03
74	GO:0098655: cation transmembrane transport	3.49E-03
75	GO:0019760: glucosinolate metabolic process	3.61E-03
76	GO:1902074: response to salt	4.12E-03
77	GO:0032880: regulation of protein localization	4.12E-03
78	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.12E-03
79	GO:0006401: RNA catabolic process	4.12E-03
80	GO:0006955: immune response	4.12E-03
81	GO:0008272: sulfate transport	4.12E-03
82	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	4.12E-03
83	GO:0050832: defense response to fungus	4.45E-03
84	GO:0010029: regulation of seed germination	4.55E-03
85	GO:2000070: regulation of response to water deprivation	4.77E-03
86	GO:0007155: cell adhesion	4.77E-03
87	GO:0009061: anaerobic respiration	4.77E-03
88	GO:0009819: drought recovery	4.77E-03
89	GO:0019375: galactolipid biosynthetic process	4.77E-03
90	GO:0048193: Golgi vesicle transport	5.47E-03
91	GO:0009751: response to salicylic acid	5.49E-03
92	GO:0098656: anion transmembrane transport	6.20E-03
93	GO:0051865: protein autoubiquitination	6.20E-03
94	GO:0016573: histone acetylation	6.96E-03
95	GO:0042761: very long-chain fatty acid biosynthetic process	6.96E-03
96	GO:2000280: regulation of root development	6.96E-03
97	GO:0007346: regulation of mitotic cell cycle	6.96E-03
98	GO:0010468: regulation of gene expression	7.61E-03
99	GO:0009617: response to bacterium	7.61E-03
100	GO:0019538: protein metabolic process	7.75E-03
101	GO:0006631: fatty acid metabolic process	8.46E-03
102	GO:0030148: sphingolipid biosynthetic process	8.58E-03
103	GO:0006816: calcium ion transport	8.58E-03
104	GO:0009682: induced systemic resistance	8.58E-03
105	GO:0051707: response to other organism	9.18E-03
106	GO:0000266: mitochondrial fission	9.44E-03
107	GO:0045037: protein import into chloroplast stroma	9.44E-03
108	GO:0010105: negative regulation of ethylene-activated signaling pathway	9.44E-03
109	GO:0050826: response to freezing	1.03E-02
110	GO:0018107: peptidyl-threonine phosphorylation	1.03E-02
111	GO:2000012: regulation of auxin polar transport	1.03E-02
112	GO:0048467: gynoecium development	1.12E-02
113	GO:0002237: response to molecule of bacterial origin	1.12E-02
114	GO:0010030: positive regulation of seed germination	1.22E-02
115	GO:0071732: cellular response to nitric oxide	1.22E-02
116	GO:0009833: plant-type primary cell wall biogenesis	1.32E-02
117	GO:0010025: wax biosynthetic process	1.32E-02
118	GO:0006636: unsaturated fatty acid biosynthetic process	1.32E-02
119	GO:0030150: protein import into mitochondrial matrix	1.42E-02
120	GO:0048367: shoot system development	1.52E-02
121	GO:0009695: jasmonic acid biosynthetic process	1.52E-02
122	GO:0051301: cell division	1.52E-02
123	GO:0009269: response to desiccation	1.62E-02
124	GO:0051321: meiotic cell cycle	1.62E-02
125	GO:0080092: regulation of pollen tube growth	1.73E-02
126	GO:0030245: cellulose catabolic process	1.73E-02
127	GO:0009624: response to nematode	1.77E-02
128	GO:0071369: cellular response to ethylene stimulus	1.84E-02
129	GO:0055085: transmembrane transport	1.92E-02
130	GO:0010584: pollen exine formation	1.95E-02
131	GO:0048443: stamen development	1.95E-02
132	GO:0000398: mRNA splicing, via spliceosome	2.04E-02
133	GO:0070417: cellular response to cold	2.07E-02
134	GO:0008284: positive regulation of cell proliferation	2.07E-02
135	GO:0042631: cellular response to water deprivation	2.19E-02
136	GO:0009408: response to heat	2.28E-02
137	GO:0048868: pollen tube development	2.31E-02
138	GO:0010268: brassinosteroid homeostasis	2.31E-02
139	GO:0009960: endosperm development	2.31E-02
140	GO:0010154: fruit development	2.31E-02
141	GO:0009958: positive gravitropism	2.31E-02
142	GO:0006814: sodium ion transport	2.43E-02
143	GO:0009753: response to jasmonic acid	2.49E-02
144	GO:0010183: pollen tube guidance	2.55E-02
145	GO:0016132: brassinosteroid biosynthetic process	2.68E-02
146	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.68E-02
147	GO:0010193: response to ozone	2.68E-02
148	GO:0000302: response to reactive oxygen species	2.68E-02
149	GO:0006633: fatty acid biosynthetic process	2.79E-02
150	GO:1901657: glycosyl compound metabolic process	2.94E-02
151	GO:0071281: cellular response to iron ion	2.94E-02
152	GO:0010150: leaf senescence	3.06E-02
153	GO:0045490: pectin catabolic process	3.06E-02
154	GO:0007623: circadian rhythm	3.06E-02
155	GO:0016125: sterol metabolic process	3.07E-02
156	GO:0009639: response to red or far red light	3.07E-02
157	GO:0051607: defense response to virus	3.34E-02
158	GO:0010027: thylakoid membrane organization	3.48E-02
159	GO:0001666: response to hypoxia	3.48E-02
160	GO:0006470: protein dephosphorylation	3.50E-02
161	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.63E-02
162	GO:0071555: cell wall organization	3.80E-02
163	GO:0006468: protein phosphorylation	3.90E-02
164	GO:0006950: response to stress	3.91E-02
165	GO:0016049: cell growth	4.06E-02
166	GO:0009817: defense response to fungus, incompatible interaction	4.21E-02
167	GO:0048481: plant ovule development	4.21E-02
168	GO:0009555: pollen development	4.64E-02
169	GO:0048527: lateral root development	4.66E-02
170	GO:0045087: innate immune response	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0017048: Rho GTPase binding	0.00E+00
2	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
3	GO:0016629: 12-oxophytodienoate reductase activity	3.35E-06
4	GO:0043565: sequence-specific DNA binding	7.25E-06
5	GO:0044212: transcription regulatory region DNA binding	1.32E-05
6	GO:0015297: antiporter activity	1.81E-04
7	GO:0090422: thiamine pyrophosphate transporter activity	2.70E-04
8	GO:0004348: glucosylceramidase activity	2.70E-04
9	GO:0017022: myosin binding	5.94E-04
10	GO:0042389: omega-3 fatty acid desaturase activity	5.94E-04
11	GO:0017040: ceramidase activity	5.94E-04
12	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	5.94E-04
13	GO:0004127: cytidylate kinase activity	5.94E-04
14	GO:0015117: thiosulfate transmembrane transporter activity	5.94E-04
15	GO:0045140: inositol phosphoceramide synthase activity	5.94E-04
16	GO:1901677: phosphate transmembrane transporter activity	5.94E-04
17	GO:0004383: guanylate cyclase activity	9.62E-04
18	GO:0005457: GDP-fucose transmembrane transporter activity	9.62E-04
19	GO:0005310: dicarboxylic acid transmembrane transporter activity	9.62E-04
20	GO:0015141: succinate transmembrane transporter activity	9.62E-04
21	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	9.62E-04
22	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.02E-03
23	GO:0019201: nucleotide kinase activity	1.38E-03
24	GO:0001653: peptide receptor activity	1.38E-03
25	GO:0009041: uridylate kinase activity	1.38E-03
26	GO:0015131: oxaloacetate transmembrane transporter activity	1.38E-03
27	GO:0005432: calcium:sodium antiporter activity	1.38E-03
28	GO:0004715: non-membrane spanning protein tyrosine kinase activity	1.38E-03
29	GO:0035250: UDP-galactosyltransferase activity	1.38E-03
30	GO:0003883: CTP synthase activity	1.38E-03
31	GO:0005460: UDP-glucose transmembrane transporter activity	1.38E-03
32	GO:0004737: pyruvate decarboxylase activity	1.84E-03
33	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.35E-03
34	GO:0010294: abscisic acid glucosyltransferase activity	2.35E-03
35	GO:0009922: fatty acid elongase activity	2.35E-03
36	GO:0051011: microtubule minus-end binding	2.35E-03
37	GO:0005459: UDP-galactose transmembrane transporter activity	2.35E-03
38	GO:0080122: AMP transmembrane transporter activity	2.35E-03
39	GO:0010181: FMN binding	2.60E-03
40	GO:0030976: thiamine pyrophosphate binding	2.90E-03
41	GO:0019137: thioglucosidase activity	2.90E-03
42	GO:0015217: ADP transmembrane transporter activity	3.49E-03
43	GO:0005347: ATP transmembrane transporter activity	3.49E-03
44	GO:0016831: carboxy-lyase activity	4.12E-03
45	GO:0015140: malate transmembrane transporter activity	4.12E-03
46	GO:0015491: cation:cation antiporter activity	4.77E-03
47	GO:0015288: porin activity	4.77E-03
48	GO:0016209: antioxidant activity	4.77E-03
49	GO:0102483: scopolin beta-glucosidase activity	5.06E-03
50	GO:0008308: voltage-gated anion channel activity	5.47E-03
51	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	5.47E-03
52	GO:0005096: GTPase activator activity	5.89E-03
53	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	5.89E-03
54	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	6.19E-03
55	GO:0003677: DNA binding	7.22E-03
56	GO:0004713: protein tyrosine kinase activity	7.75E-03
57	GO:0008422: beta-glucosidase activity	7.77E-03
58	GO:0015116: sulfate transmembrane transporter activity	9.44E-03
59	GO:0005262: calcium channel activity	1.03E-02
60	GO:0019888: protein phosphatase regulator activity	1.03E-02
61	GO:0015114: phosphate ion transmembrane transporter activity	1.03E-02
62	GO:0005388: calcium-transporting ATPase activity	1.03E-02
63	GO:0000175: 3'-5'-exoribonuclease activity	1.03E-02
64	GO:0015266: protein channel activity	1.03E-02
65	GO:0008083: growth factor activity	1.12E-02
66	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.12E-02
67	GO:0017025: TBP-class protein binding	1.22E-02
68	GO:0003712: transcription cofactor activity	1.22E-02
69	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.32E-02
70	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.32E-02
71	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.32E-02
72	GO:0016301: kinase activity	1.39E-02
73	GO:0004540: ribonuclease activity	1.62E-02
74	GO:0004707: MAP kinase activity	1.62E-02
75	GO:0016874: ligase activity	1.67E-02
76	GO:0022857: transmembrane transporter activity	1.67E-02
77	GO:0030570: pectate lyase activity	1.84E-02
78	GO:0004722: protein serine/threonine phosphatase activity	1.97E-02
79	GO:0004402: histone acetyltransferase activity	2.19E-02
80	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	2.31E-02
81	GO:0019901: protein kinase binding	2.55E-02
82	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.85E-02
83	GO:0016597: amino acid binding	3.34E-02
84	GO:0008194: UDP-glycosyltransferase activity	3.42E-02
85	GO:0004806: triglyceride lipase activity	3.91E-02
86	GO:0004721: phosphoprotein phosphatase activity	3.91E-02
87	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.06E-02
88	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.21E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0070382: exocytic vesicle	2.70E-04
3	GO:0030133: transport vesicle	5.94E-04
4	GO:0031357: integral component of chloroplast inner membrane	5.94E-04
5	GO:0042170: plastid membrane	5.94E-04
6	GO:0070652: HAUS complex	9.62E-04
7	GO:0005743: mitochondrial inner membrane	1.16E-03
8	GO:0045177: apical part of cell	1.38E-03
9	GO:0009527: plastid outer membrane	1.84E-03
10	GO:0000178: exosome (RNase complex)	2.35E-03
11	GO:0031305: integral component of mitochondrial inner membrane	4.77E-03
12	GO:0046930: pore complex	5.47E-03
13	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	5.47E-03
14	GO:0016604: nuclear body	6.96E-03
15	GO:0005876: spindle microtubule	6.96E-03
16	GO:0031225: anchored component of membrane	7.88E-03
17	GO:0000159: protein phosphatase type 2A complex	8.58E-03
18	GO:0046658: anchored component of plasma membrane	8.69E-03
19	GO:0005938: cell cortex	1.03E-02
20	GO:0005758: mitochondrial intermembrane space	1.42E-02
21	GO:0009706: chloroplast inner membrane	1.77E-02
22	GO:0015629: actin cytoskeleton	1.84E-02
23	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.95E-02
24	GO:0005622: intracellular	3.15E-02
25	GO:0000932: P-body	3.48E-02
26	GO:0016020: membrane	3.82E-02
27	GO:0009707: chloroplast outer membrane	4.21E-02
28	GO:0005634: nucleus	4.68E-02