Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G09950

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019593: mannitol biosynthetic process0.00E+00
2GO:0006203: dGTP catabolic process0.00E+00
3GO:0035024: negative regulation of Rho protein signal transduction0.00E+00
4GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
5GO:0010412: mannan metabolic process0.00E+00
6GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process0.00E+00
7GO:0009873: ethylene-activated signaling pathway1.29E-06
8GO:0009737: response to abscisic acid8.64E-05
9GO:0035435: phosphate ion transmembrane transport1.90E-04
10GO:0009631: cold acclimation2.16E-04
11GO:0009409: response to cold2.28E-04
12GO:0009414: response to water deprivation3.03E-04
13GO:0006631: fatty acid metabolic process3.34E-04
14GO:0009609: response to symbiotic bacterium3.73E-04
15GO:1902265: abscisic acid homeostasis3.73E-04
16GO:0051180: vitamin transport3.73E-04
17GO:0030974: thiamine pyrophosphate transport3.73E-04
18GO:0009865: pollen tube adhesion3.73E-04
19GO:0033481: galacturonate biosynthetic process3.73E-04
20GO:0090421: embryonic meristem initiation3.73E-04
21GO:0042335: cuticle development4.05E-04
22GO:0009819: drought recovery4.18E-04
23GO:0009415: response to water4.18E-04
24GO:0042538: hyperosmotic salinity response5.45E-04
25GO:0019760: glucosinolate metabolic process7.50E-04
26GO:0071422: succinate transmembrane transport8.10E-04
27GO:0031407: oxylipin metabolic process8.10E-04
28GO:0010289: homogalacturonan biosynthetic process8.10E-04
29GO:0006898: receptor-mediated endocytosis8.10E-04
30GO:0015786: UDP-glucose transport8.10E-04
31GO:1901679: nucleotide transmembrane transport8.10E-04
32GO:0015893: drug transport8.10E-04
33GO:0010507: negative regulation of autophagy8.10E-04
34GO:0015709: thiosulfate transport8.10E-04
35GO:0000038: very long-chain fatty acid metabolic process9.70E-04
36GO:0018107: peptidyl-threonine phosphorylation1.25E-03
37GO:0015783: GDP-fucose transport1.31E-03
38GO:0010325: raffinose family oligosaccharide biosynthetic process1.31E-03
39GO:0044210: 'de novo' CTP biosynthetic process1.31E-03
40GO:0016045: detection of bacterium1.31E-03
41GO:0009062: fatty acid catabolic process1.31E-03
42GO:0080121: AMP transport1.31E-03
43GO:0010359: regulation of anion channel activity1.31E-03
44GO:0010288: response to lead ion1.31E-03
45GO:0090630: activation of GTPase activity1.31E-03
46GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid1.31E-03
47GO:0006811: ion transport1.47E-03
48GO:0070588: calcium ion transmembrane transport1.58E-03
49GO:0010200: response to chitin1.64E-03
50GO:0010025: wax biosynthetic process1.76E-03
51GO:0010371: regulation of gibberellin biosynthetic process1.89E-03
52GO:1901000: regulation of response to salt stress1.89E-03
53GO:0015729: oxaloacetate transport1.89E-03
54GO:0072334: UDP-galactose transmembrane transport1.89E-03
55GO:0030100: regulation of endocytosis1.89E-03
56GO:0006839: mitochondrial transport2.08E-03
57GO:0031408: oxylipin biosynthetic process2.37E-03
58GO:0045490: pectin catabolic process2.38E-03
59GO:0009687: abscisic acid metabolic process2.54E-03
60GO:0046345: abscisic acid catabolic process2.54E-03
61GO:0046355: mannan catabolic process2.54E-03
62GO:0022622: root system development2.54E-03
63GO:0071585: detoxification of cadmium ion2.54E-03
64GO:0006552: leucine catabolic process2.54E-03
65GO:0042991: transcription factor import into nucleus2.54E-03
66GO:0015867: ATP transport2.54E-03
67GO:0009611: response to wounding2.56E-03
68GO:0006355: regulation of transcription, DNA-templated2.65E-03
69GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.83E-03
70GO:0001944: vasculature development2.83E-03
71GO:0006461: protein complex assembly3.25E-03
72GO:0006665: sphingolipid metabolic process3.25E-03
73GO:0032957: inositol trisphosphate metabolic process3.25E-03
74GO:0070897: DNA-templated transcriptional preinitiation complex assembly3.25E-03
75GO:0048359: mucilage metabolic process involved in seed coat development3.25E-03
76GO:0071423: malate transmembrane transport3.25E-03
77GO:0009823: cytokinin catabolic process3.25E-03
78GO:0006656: phosphatidylcholine biosynthetic process3.25E-03
79GO:0006873: cellular ion homeostasis3.25E-03
80GO:0048497: maintenance of floral organ identity3.25E-03
81GO:0042631: cellular response to water deprivation3.60E-03
82GO:0045489: pectin biosynthetic process3.88E-03
83GO:0048868: pollen tube development3.88E-03
84GO:0006751: glutathione catabolic process4.02E-03
85GO:0015866: ADP transport4.02E-03
86GO:0047484: regulation of response to osmotic stress4.02E-03
87GO:1900425: negative regulation of defense response to bacterium4.02E-03
88GO:0006574: valine catabolic process4.02E-03
89GO:0000302: response to reactive oxygen species4.79E-03
90GO:0071470: cellular response to osmotic stress4.85E-03
91GO:0045926: negative regulation of growth4.85E-03
92GO:0009082: branched-chain amino acid biosynthetic process4.85E-03
93GO:2000033: regulation of seed dormancy process4.85E-03
94GO:0098655: cation transmembrane transport4.85E-03
95GO:0010555: response to mannitol4.85E-03
96GO:0006970: response to osmotic stress5.20E-03
97GO:0042545: cell wall modification5.37E-03
98GO:0009624: response to nematode5.58E-03
99GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.73E-03
100GO:0009610: response to symbiotic fungus5.73E-03
101GO:0030497: fatty acid elongation5.73E-03
102GO:0008272: sulfate transport5.73E-03
103GO:0050829: defense response to Gram-negative bacterium5.73E-03
104GO:1902074: response to salt5.73E-03
105GO:0010103: stomatal complex morphogenesis5.73E-03
106GO:0032880: regulation of protein localization5.73E-03
107GO:0009828: plant-type cell wall loosening5.81E-03
108GO:0080167: response to karrikin6.45E-03
109GO:0007155: cell adhesion6.65E-03
110GO:0035265: organ growth6.65E-03
111GO:0009938: negative regulation of gibberellic acid mediated signaling pathway6.65E-03
112GO:0009690: cytokinin metabolic process6.65E-03
113GO:2000070: regulation of response to water deprivation6.65E-03
114GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway6.79E-03
115GO:0009880: embryonic pattern specification7.64E-03
116GO:0009827: plant-type cell wall modification7.64E-03
117GO:0001708: cell fate specification8.66E-03
118GO:0015780: nucleotide-sugar transport8.66E-03
119GO:0098656: anion transmembrane transport8.66E-03
120GO:0006098: pentose-phosphate shunt8.66E-03
121GO:0048268: clathrin coat assembly9.74E-03
122GO:0042761: very long-chain fatty acid biosynthetic process9.74E-03
123GO:2000280: regulation of root development9.74E-03
124GO:0007346: regulation of mitotic cell cycle9.74E-03
125GO:0006633: fatty acid biosynthetic process9.95E-03
126GO:0009641: shade avoidance1.09E-02
127GO:0006949: syncytium formation1.09E-02
128GO:0052544: defense response by callose deposition in cell wall1.20E-02
129GO:0055085: transmembrane transport1.27E-02
130GO:0009739: response to gibberellin1.29E-02
131GO:0016024: CDP-diacylglycerol biosynthetic process1.33E-02
132GO:0006470: protein dephosphorylation1.33E-02
133GO:0045037: protein import into chloroplast stroma1.33E-02
134GO:0010105: negative regulation of ethylene-activated signaling pathway1.33E-02
135GO:0007166: cell surface receptor signaling pathway1.33E-02
136GO:0010468: regulation of gene expression1.40E-02
137GO:0005986: sucrose biosynthetic process1.45E-02
138GO:2000012: regulation of auxin polar transport1.45E-02
139GO:0030048: actin filament-based movement1.45E-02
140GO:0050826: response to freezing1.45E-02
141GO:0051707: response to other organism1.49E-02
142GO:0010143: cutin biosynthetic process1.58E-02
143GO:0009225: nucleotide-sugar metabolic process1.71E-02
144GO:0010030: positive regulation of seed germination1.71E-02
145GO:0009833: plant-type primary cell wall biogenesis1.85E-02
146GO:0009664: plant-type cell wall organization1.87E-02
147GO:0009863: salicylic acid mediated signaling pathway1.99E-02
148GO:0030150: protein import into mitochondrial matrix1.99E-02
149GO:0010187: negative regulation of seed germination1.99E-02
150GO:2000377: regulation of reactive oxygen species metabolic process1.99E-02
151GO:0007017: microtubule-based process2.14E-02
152GO:0009695: jasmonic acid biosynthetic process2.14E-02
153GO:0009269: response to desiccation2.29E-02
154GO:0051321: meiotic cell cycle2.29E-02
155GO:0043086: negative regulation of catalytic activity2.38E-02
156GO:0080092: regulation of pollen tube growth2.44E-02
157GO:0048367: shoot system development2.46E-02
158GO:0010584: pollen exine formation2.76E-02
159GO:0048443: stamen development2.76E-02
160GO:0071555: cell wall organization2.82E-02
161GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.92E-02
162GO:0070417: cellular response to cold2.92E-02
163GO:0008284: positive regulation of cell proliferation2.92E-02
164GO:0018105: peptidyl-serine phosphorylation2.95E-02
165GO:0006351: transcription, DNA-templated3.06E-02
166GO:0000226: microtubule cytoskeleton organization3.08E-02
167GO:0045454: cell redox homeostasis3.20E-02
168GO:0010268: brassinosteroid homeostasis3.25E-02
169GO:0009960: endosperm development3.25E-02
170GO:0009958: positive gravitropism3.25E-02
171GO:0050832: defense response to fungus3.27E-02
172GO:0006814: sodium ion transport3.42E-02
173GO:0010183: pollen tube guidance3.60E-02
174GO:0009749: response to glucose3.60E-02
175GO:0016132: brassinosteroid biosynthetic process3.78E-02
176GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.78E-02
177GO:0010193: response to ozone3.78E-02
178GO:0006635: fatty acid beta-oxidation3.78E-02
179GO:0010583: response to cyclopentenone3.96E-02
180GO:0009751: response to salicylic acid4.08E-02
181GO:0016125: sterol metabolic process4.33E-02
182GO:0009639: response to red or far red light4.33E-02
183GO:0010286: heat acclimation4.52E-02
184GO:0009911: positive regulation of flower development4.91E-02
185GO:0007623: circadian rhythm4.93E-02
186GO:0010150: leaf senescence4.93E-02
RankGO TermAdjusted P value
1GO:0017048: Rho GTPase binding0.00E+00
2GO:0008413: 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity0.00E+00
3GO:0019177: dihydroneopterin triphosphate pyrophosphohydrolase activity0.00E+00
4GO:0035539: 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity0.00E+00
5GO:0009922: fatty acid elongase activity1.71E-06
6GO:0016629: 12-oxophytodienoate reductase activity6.25E-06
7GO:0070330: aromatase activity2.19E-05
8GO:0003883: CTP synthase activity4.81E-05
9GO:0018685: alkane 1-monooxygenase activity1.32E-04
10GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.50E-04
11GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.50E-04
12GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.50E-04
13GO:0043565: sequence-specific DNA binding2.68E-04
14GO:0008809: carnitine racemase activity3.73E-04
15GO:0090422: thiamine pyrophosphate transporter activity3.73E-04
16GO:0004105: choline-phosphate cytidylyltransferase activity3.73E-04
17GO:0003839: gamma-glutamylcyclotransferase activity8.10E-04
18GO:0015117: thiosulfate transmembrane transporter activity8.10E-04
19GO:1901677: phosphate transmembrane transporter activity8.10E-04
20GO:0017022: myosin binding8.10E-04
21GO:0017040: ceramidase activity8.10E-04
22GO:0044212: transcription regulatory region DNA binding1.06E-03
23GO:0005457: GDP-fucose transmembrane transporter activity1.31E-03
24GO:0047325: inositol tetrakisphosphate 1-kinase activity1.31E-03
25GO:0005310: dicarboxylic acid transmembrane transporter activity1.31E-03
26GO:0047274: galactinol-sucrose galactosyltransferase activity1.31E-03
27GO:0010295: (+)-abscisic acid 8'-hydroxylase activity1.31E-03
28GO:0015141: succinate transmembrane transporter activity1.31E-03
29GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity1.31E-03
30GO:0008083: growth factor activity1.41E-03
31GO:0003700: transcription factor activity, sequence-specific DNA binding1.66E-03
32GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity1.89E-03
33GO:0052655: L-valine transaminase activity1.89E-03
34GO:0015131: oxaloacetate transmembrane transporter activity1.89E-03
35GO:0005432: calcium:sodium antiporter activity1.89E-03
36GO:0005460: UDP-glucose transmembrane transporter activity1.89E-03
37GO:0052656: L-isoleucine transaminase activity1.89E-03
38GO:0004165: dodecenoyl-CoA delta-isomerase activity1.89E-03
39GO:0052654: L-leucine transaminase activity1.89E-03
40GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.14E-03
41GO:0016985: mannan endo-1,4-beta-mannosidase activity2.54E-03
42GO:0004084: branched-chain-amino-acid transaminase activity2.54E-03
43GO:0050378: UDP-glucuronate 4-epimerase activity2.54E-03
44GO:0010294: abscisic acid glucosyltransferase activity3.25E-03
45GO:0005459: UDP-galactose transmembrane transporter activity3.25E-03
46GO:0019139: cytokinin dehydrogenase activity3.25E-03
47GO:0080122: AMP transmembrane transporter activity3.25E-03
48GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.25E-03
49GO:0000210: NAD+ diphosphatase activity4.02E-03
50GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.02E-03
51GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.02E-03
52GO:0045330: aspartyl esterase activity4.05E-03
53GO:0010181: FMN binding4.18E-03
54GO:0015217: ADP transmembrane transporter activity4.85E-03
55GO:0005347: ATP transmembrane transporter activity4.85E-03
56GO:0030599: pectinesterase activity5.17E-03
57GO:0016621: cinnamoyl-CoA reductase activity5.73E-03
58GO:0015140: malate transmembrane transporter activity5.73E-03
59GO:0015288: porin activity6.65E-03
60GO:0016209: antioxidant activity6.65E-03
61GO:0015491: cation:cation antiporter activity6.65E-03
62GO:0008308: voltage-gated anion channel activity7.64E-03
63GO:0016301: kinase activity7.91E-03
64GO:0004674: protein serine/threonine kinase activity8.49E-03
65GO:0008757: S-adenosylmethionine-dependent methyltransferase activity8.62E-03
66GO:0000989: transcription factor activity, transcription factor binding8.66E-03
67GO:0005096: GTPase activator activity9.54E-03
68GO:0046910: pectinesterase inhibitor activity1.03E-02
69GO:0015297: antiporter activity1.06E-02
70GO:0005545: 1-phosphatidylinositol binding1.09E-02
71GO:0004713: protein tyrosine kinase activity1.09E-02
72GO:0015116: sulfate transmembrane transporter activity1.33E-02
73GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.36E-02
74GO:0005262: calcium channel activity1.45E-02
75GO:0015114: phosphate ion transmembrane transporter activity1.45E-02
76GO:0005388: calcium-transporting ATPase activity1.45E-02
77GO:0015266: protein channel activity1.45E-02
78GO:0003774: motor activity1.58E-02
79GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.58E-02
80GO:0017025: TBP-class protein binding1.71E-02
81GO:0008146: sulfotransferase activity1.71E-02
82GO:0004857: enzyme inhibitor activity1.99E-02
83GO:0051087: chaperone binding2.14E-02
84GO:0004707: MAP kinase activity2.29E-02
85GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.44E-02
86GO:0030570: pectate lyase activity2.60E-02
87GO:0080043: quercetin 3-O-glucosyltransferase activity2.62E-02
88GO:0080044: quercetin 7-O-glucosyltransferase activity2.62E-02
89GO:0008514: organic anion transmembrane transporter activity2.76E-02
90GO:0016746: transferase activity, transferring acyl groups2.95E-02
91GO:0003677: DNA binding3.02E-02
92GO:0030276: clathrin binding3.25E-02
93GO:0003824: catalytic activity3.29E-02
94GO:0004722: protein serine/threonine phosphatase activity3.59E-02
95GO:0016791: phosphatase activity4.33E-02
96GO:0016722: oxidoreductase activity, oxidizing metal ions4.52E-02
97GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.52E-02
98GO:0005200: structural constituent of cytoskeleton4.52E-02
99GO:0016413: O-acetyltransferase activity4.71E-02
100GO:0005516: calmodulin binding4.96E-02
RankGO TermAdjusted P value
1GO:0034426: etioplast membrane0.00E+00
2GO:0046658: anchored component of plasma membrane1.56E-04
3GO:0070382: exocytic vesicle3.73E-04
4GO:0005618: cell wall7.65E-04
5GO:0005622: intracellular7.73E-04
6GO:0030133: transport vesicle8.10E-04
7GO:0031357: integral component of chloroplast inner membrane8.10E-04
8GO:0009505: plant-type cell wall1.81E-03
9GO:0045177: apical part of cell1.89E-03
10GO:0009527: plastid outer membrane2.54E-03
11GO:0000793: condensed chromosome4.02E-03
12GO:0005798: Golgi-associated vesicle4.02E-03
13GO:0016020: membrane4.87E-03
14GO:0000794: condensed nuclear chromosome5.73E-03
15GO:0031225: anchored component of membrane5.90E-03
16GO:0031305: integral component of mitochondrial inner membrane6.65E-03
17GO:0046930: pore complex7.64E-03
18GO:0005768: endosome7.99E-03
19GO:0045298: tubulin complex8.66E-03
20GO:0016604: nuclear body9.74E-03
21GO:0005743: mitochondrial inner membrane1.04E-02
22GO:0005938: cell cortex1.45E-02
23GO:0005769: early endosome1.85E-02
24GO:0005802: trans-Golgi network1.90E-02
25GO:0005905: clathrin-coated pit2.29E-02
26GO:0016021: integral component of membrane2.72E-02
27GO:0005744: mitochondrial inner membrane presequence translocase complex2.76E-02
28GO:0030136: clathrin-coated vesicle2.92E-02
29GO:0032580: Golgi cisterna membrane4.33E-02
30GO:0043231: intracellular membrane-bounded organelle4.67E-02
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Gene type



Gene DE type