co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G09350

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010412: mannan metabolic process	0.00E+00
2	GO:0051569: regulation of histone H3-K4 methylation	0.00E+00
3	GO:0071475: cellular hyperosmotic salinity response	0.00E+00
4	GO:0031338: regulation of vesicle fusion	6.58E-05
5	GO:0044210: 'de novo' CTP biosynthetic process	2.69E-04
6	GO:0090630: activation of GTPase activity	2.69E-04
7	GO:0042631: cellular response to water deprivation	3.43E-04
8	GO:0080024: indolebutyric acid metabolic process	3.90E-04
9	GO:0070301: cellular response to hydrogen peroxide	3.90E-04
10	GO:0043481: anthocyanin accumulation in tissues in response to UV light	3.90E-04
11	GO:0015689: molybdate ion transport	5.20E-04
12	GO:0046355: mannan catabolic process	5.20E-04
13	GO:0009739: response to gibberellin	6.05E-04
14	GO:0032957: inositol trisphosphate metabolic process	6.60E-04
15	GO:0009823: cytokinin catabolic process	6.60E-04
16	GO:0006656: phosphatidylcholine biosynthetic process	6.60E-04
17	GO:0047484: regulation of response to osmotic stress	8.06E-04
18	GO:0010016: shoot system morphogenesis	9.59E-04
19	GO:2000033: regulation of seed dormancy process	9.59E-04
20	GO:0010103: stomatal complex morphogenesis	1.12E-03
21	GO:0080167: response to karrikin	1.18E-03
22	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	1.29E-03
23	GO:0009690: cytokinin metabolic process	1.29E-03
24	GO:0009827: plant-type cell wall modification	1.47E-03
25	GO:0016571: histone methylation	1.85E-03
26	GO:0006949: syncytium formation	2.05E-03
27	GO:0043086: negative regulation of catalytic activity	2.11E-03
28	GO:0048765: root hair cell differentiation	2.26E-03
29	GO:0015706: nitrate transport	2.48E-03
30	GO:0050826: response to freezing	2.70E-03
31	GO:0010102: lateral root morphogenesis	2.70E-03
32	GO:0009058: biosynthetic process	3.32E-03
33	GO:0006289: nucleotide-excision repair	3.65E-03
34	GO:2000377: regulation of reactive oxygen species metabolic process	3.65E-03
35	GO:0009863: salicylic acid mediated signaling pathway	3.65E-03
36	GO:0010187: negative regulation of seed germination	3.65E-03
37	GO:0071456: cellular response to hypoxia	4.43E-03
38	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.70E-03
39	GO:0071215: cellular response to abscisic acid stimulus	4.70E-03
40	GO:0006284: base-excision repair	4.98E-03
41	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.26E-03
42	GO:0042335: cuticle development	5.55E-03
43	GO:0071554: cell wall organization or biogenesis	6.76E-03
44	GO:0006351: transcription, DNA-templated	6.96E-03
45	GO:0009828: plant-type cell wall loosening	7.73E-03
46	GO:0009723: response to ethylene	7.74E-03
47	GO:0016310: phosphorylation	7.75E-03
48	GO:0010200: response to chitin	8.59E-03
49	GO:0042128: nitrate assimilation	9.44E-03
50	GO:0009733: response to auxin	1.12E-02
51	GO:0009910: negative regulation of flower development	1.17E-02
52	GO:0009867: jasmonic acid mediated signaling pathway	1.24E-02
53	GO:0008152: metabolic process	1.35E-02
54	GO:0006897: endocytosis	1.40E-02
55	GO:0010114: response to red light	1.49E-02
56	GO:0051707: response to other organism	1.49E-02
57	GO:0009640: photomorphogenesis	1.49E-02
58	GO:0009664: plant-type cell wall organization	1.75E-02
59	GO:0042538: hyperosmotic salinity response	1.75E-02
60	GO:0006857: oligopeptide transport	1.93E-02
61	GO:0006355: regulation of transcription, DNA-templated	2.05E-02
62	GO:0009740: gibberellic acid mediated signaling pathway	2.26E-02
63	GO:0009742: brassinosteroid mediated signaling pathway	2.46E-02
64	GO:0007623: circadian rhythm	3.49E-02
65	GO:0010150: leaf senescence	3.49E-02
66	GO:0045490: pectin catabolic process	3.49E-02
67	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.78E-02
68	GO:0006470: protein dephosphorylation	3.83E-02
69	GO:0007166: cell surface receptor signaling pathway	3.83E-02
70	GO:0006979: response to oxidative stress	4.44E-02
71	GO:0009826: unidimensional cell growth	4.63E-02
72	GO:0030154: cell differentiation	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
2	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	6.58E-05
3	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	6.58E-05
4	GO:0004105: choline-phosphate cytidylyltransferase activity	6.58E-05
5	GO:0047325: inositol tetrakisphosphate 1-kinase activity	2.69E-04
6	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	2.69E-04
7	GO:0003883: CTP synthase activity	3.90E-04
8	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	3.90E-04
9	GO:0016985: mannan endo-1,4-beta-mannosidase activity	5.20E-04
10	GO:0019104: DNA N-glycosylase activity	5.20E-04
11	GO:0015098: molybdate ion transmembrane transporter activity	5.20E-04
12	GO:0000993: RNA polymerase II core binding	5.20E-04
13	GO:0019139: cytokinin dehydrogenase activity	6.60E-04
14	GO:0017137: Rab GTPase binding	6.60E-04
15	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.05E-03
16	GO:0000989: transcription factor activity, transcription factor binding	1.65E-03
17	GO:0015112: nitrate transmembrane transporter activity	1.85E-03
18	GO:0005543: phospholipid binding	2.26E-03
19	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.31E-03
20	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.31E-03
21	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.62E-03
22	GO:0004022: alcohol dehydrogenase (NAD) activity	2.70E-03
23	GO:0046910: pectinesterase inhibitor activity	4.05E-03
24	GO:0035251: UDP-glucosyltransferase activity	4.17E-03
25	GO:0030570: pectate lyase activity	4.70E-03
26	GO:0008194: UDP-glycosyltransferase activity	4.85E-03
27	GO:0001085: RNA polymerase II transcription factor binding	5.85E-03
28	GO:0003684: damaged DNA binding	7.73E-03
29	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	8.06E-03
30	GO:0016413: O-acetyltransferase activity	8.40E-03
31	GO:0005096: GTPase activator activity	1.09E-02
32	GO:0004222: metalloendopeptidase activity	1.13E-02
33	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.17E-02
34	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.17E-02
35	GO:0008270: zinc ion binding	1.65E-02
36	GO:0043565: sequence-specific DNA binding	2.34E-02
37	GO:0016758: transferase activity, transferring hexosyl groups	2.72E-02
38	GO:0016829: lyase activity	2.93E-02
39	GO:0004252: serine-type endopeptidase activity	2.99E-02
40	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.04E-02
41	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.32E-02
42	GO:0042802: identical protein binding	4.13E-02
43	GO:0044212: transcription regulatory region DNA binding	4.41E-02
44	GO:0008168: methyltransferase activity	4.63E-02
45	GO:0000287: magnesium ion binding	4.69E-02
46	GO:0005215: transporter activity	4.86E-02
47	GO:0003682: chromatin binding	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0016593: Cdc73/Paf1 complex	5.20E-04
2	GO:0031012: extracellular matrix	2.70E-03
3	GO:0005905: clathrin-coated pit	4.17E-03
4	GO:0030136: clathrin-coated vesicle	5.26E-03
5	GO:0005622: intracellular	8.19E-03
6	GO:0005667: transcription factor complex	9.44E-03
7	GO:0043231: intracellular membrane-bounded organelle	1.35E-02
8	GO:0012505: endomembrane system	2.31E-02
9	GO:0009705: plant-type vacuole membrane	3.49E-02
10	GO:0005615: extracellular space	3.78E-02
11	GO:0005737: cytoplasm	4.32E-02