co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G09150

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009249: protein lipoylation	0.00E+00
2	GO:0016031: tRNA import into mitochondrion	0.00E+00
3	GO:0009583: detection of light stimulus	0.00E+00
4	GO:0009106: lipoate metabolic process	0.00E+00
5	GO:0036172: thiamine salvage	0.00E+00
6	GO:0045747: positive regulation of Notch signaling pathway	0.00E+00
7	GO:0071000: response to magnetism	0.00E+00
8	GO:0032928: regulation of superoxide anion generation	0.00E+00
9	GO:0046085: adenosine metabolic process	0.00E+00
10	GO:0010117: photoprotection	1.85E-05
11	GO:0033365: protein localization to organelle	2.79E-05
12	GO:0071806: protein transmembrane transport	1.14E-04
13	GO:0072387: flavin adenine dinucleotide metabolic process	1.14E-04
14	GO:0043686: co-translational protein modification	1.14E-04
15	GO:0048438: floral whorl development	1.14E-04
16	GO:0010343: singlet oxygen-mediated programmed cell death	2.65E-04
17	GO:1901529: positive regulation of anion channel activity	2.65E-04
18	GO:2000071: regulation of defense response by callose deposition	2.65E-04
19	GO:0010617: circadian regulation of calcium ion oscillation	2.65E-04
20	GO:0099402: plant organ development	2.65E-04
21	GO:0016122: xanthophyll metabolic process	2.65E-04
22	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	4.38E-04
23	GO:1902448: positive regulation of shade avoidance	4.38E-04
24	GO:1901672: positive regulation of systemic acquired resistance	4.38E-04
25	GO:0007005: mitochondrion organization	5.07E-04
26	GO:0009399: nitrogen fixation	6.29E-04
27	GO:1901332: negative regulation of lateral root development	6.29E-04
28	GO:0010118: stomatal movement	6.98E-04
29	GO:0000398: mRNA splicing, via spliceosome	7.93E-04
30	GO:1900864: mitochondrial RNA modification	8.35E-04
31	GO:0042274: ribosomal small subunit biogenesis	8.35E-04
32	GO:0006221: pyrimidine nucleotide biosynthetic process	8.35E-04
33	GO:0000956: nuclear-transcribed mRNA catabolic process	8.35E-04
34	GO:1902347: response to strigolactone	8.35E-04
35	GO:0034613: cellular protein localization	8.35E-04
36	GO:0006542: glutamine biosynthetic process	8.35E-04
37	GO:0006544: glycine metabolic process	1.05E-03
38	GO:0046283: anthocyanin-containing compound metabolic process	1.05E-03
39	GO:0031365: N-terminal protein amino acid modification	1.05E-03
40	GO:0009229: thiamine diphosphate biosynthetic process	1.05E-03
41	GO:0009107: lipoate biosynthetic process	1.05E-03
42	GO:0031053: primary miRNA processing	1.29E-03
43	GO:1901371: regulation of leaf morphogenesis	1.29E-03
44	GO:0009228: thiamine biosynthetic process	1.29E-03
45	GO:0060918: auxin transport	1.29E-03
46	GO:0010190: cytochrome b6f complex assembly	1.29E-03
47	GO:0006563: L-serine metabolic process	1.29E-03
48	GO:0016070: RNA metabolic process	1.29E-03
49	GO:0010310: regulation of hydrogen peroxide metabolic process	1.54E-03
50	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.54E-03
51	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	1.54E-03
52	GO:0010076: maintenance of floral meristem identity	1.54E-03
53	GO:0051510: regulation of unidimensional cell growth	1.81E-03
54	GO:0045292: mRNA cis splicing, via spliceosome	2.09E-03
55	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.09E-03
56	GO:0006605: protein targeting	2.09E-03
57	GO:0009704: de-etiolation	2.09E-03
58	GO:0022900: electron transport chain	2.39E-03
59	GO:0032544: plastid translation	2.39E-03
60	GO:0098656: anion transmembrane transport	2.70E-03
61	GO:0009245: lipid A biosynthetic process	2.70E-03
62	GO:0009638: phototropism	3.02E-03
63	GO:0035999: tetrahydrofolate interconversion	3.02E-03
64	GO:1900865: chloroplast RNA modification	3.02E-03
65	GO:1900426: positive regulation of defense response to bacterium	3.02E-03
66	GO:0009688: abscisic acid biosynthetic process	3.36E-03
67	GO:0009682: induced systemic resistance	3.71E-03
68	GO:0010582: floral meristem determinacy	4.06E-03
69	GO:0009785: blue light signaling pathway	4.43E-03
70	GO:0010075: regulation of meristem growth	4.43E-03
71	GO:0009266: response to temperature stimulus	4.81E-03
72	GO:0090351: seedling development	5.21E-03
73	GO:0000162: tryptophan biosynthetic process	5.61E-03
74	GO:2000377: regulation of reactive oxygen species metabolic process	6.03E-03
75	GO:2000022: regulation of jasmonic acid mediated signaling pathway	7.34E-03
76	GO:0009646: response to absence of light	1.02E-02
77	GO:0042752: regulation of circadian rhythm	1.02E-02
78	GO:0009851: auxin biosynthetic process	1.08E-02
79	GO:0080156: mitochondrial mRNA modification	1.13E-02
80	GO:0002229: defense response to oomycetes	1.13E-02
81	GO:0042128: nitrate assimilation	1.58E-02
82	GO:0006888: ER to Golgi vesicle-mediated transport	1.64E-02
83	GO:0006950: response to stress	1.64E-02
84	GO:0018298: protein-chromophore linkage	1.77E-02
85	GO:0006811: ion transport	1.89E-02
86	GO:0010218: response to far red light	1.89E-02
87	GO:0009910: negative regulation of flower development	1.96E-02
88	GO:0009853: photorespiration	2.09E-02
89	GO:0009867: jasmonic acid mediated signaling pathway	2.09E-02
90	GO:0009637: response to blue light	2.09E-02
91	GO:0006099: tricarboxylic acid cycle	2.16E-02
92	GO:0009640: photomorphogenesis	2.50E-02
93	GO:0008283: cell proliferation	2.50E-02
94	GO:0010114: response to red light	2.50E-02
95	GO:0006412: translation	2.54E-02
96	GO:0009644: response to high light intensity	2.65E-02
97	GO:0000154: rRNA modification	2.72E-02
98	GO:0031347: regulation of defense response	2.87E-02
99	GO:0000165: MAPK cascade	2.87E-02
100	GO:0006417: regulation of translation	3.33E-02
101	GO:0009620: response to fungus	3.73E-02
102	GO:0006396: RNA processing	4.06E-02

Rank	GO Term	Adjusted P value
1	GO:0033819: lipoyl(octanoyl) transferase activity	0.00E+00
2	GO:0004417: hydroxyethylthiazole kinase activity	0.00E+00
3	GO:0004848: ureidoglycolate hydrolase activity	2.51E-06
4	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.14E-04
5	GO:0042586: peptide deformylase activity	1.14E-04
6	GO:0015266: protein channel activity	2.41E-04
7	GO:0016415: octanoyltransferase activity	2.65E-04
8	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	2.65E-04
9	GO:0017118: lipoyltransferase activity	2.65E-04
10	GO:0000900: translation repressor activity, nucleic acid binding	4.38E-04
11	GO:0008649: rRNA methyltransferase activity	4.38E-04
12	GO:0017176: phosphatidylinositol N-acetylglucosaminyltransferase activity	4.38E-04
13	GO:0000339: RNA cap binding	6.29E-04
14	GO:0009882: blue light photoreceptor activity	6.29E-04
15	GO:0004834: tryptophan synthase activity	8.35E-04
16	GO:0005319: lipid transporter activity	8.35E-04
17	GO:0004372: glycine hydroxymethyltransferase activity	1.05E-03
18	GO:0004356: glutamate-ammonia ligase activity	1.05E-03
19	GO:0031177: phosphopantetheine binding	1.29E-03
20	GO:0000035: acyl binding	1.54E-03
21	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.69E-03
22	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	2.09E-03
23	GO:0071949: FAD binding	2.70E-03
24	GO:0043621: protein self-association	2.96E-03
25	GO:0009982: pseudouridine synthase activity	4.43E-03
26	GO:0005315: inorganic phosphate transmembrane transporter activity	4.43E-03
27	GO:0016787: hydrolase activity	5.51E-03
28	GO:0003723: RNA binding	6.73E-03
29	GO:0008514: organic anion transmembrane transporter activity	8.26E-03
30	GO:0008080: N-acetyltransferase activity	9.73E-03
31	GO:0003713: transcription coactivator activity	9.73E-03
32	GO:0005515: protein binding	1.21E-02
33	GO:0008375: acetylglucosaminyltransferase activity	1.58E-02
34	GO:0050897: cobalt ion binding	1.96E-02
35	GO:0003697: single-stranded DNA binding	2.09E-02
36	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.22E-02
37	GO:0051537: 2 iron, 2 sulfur cluster binding	2.65E-02
38	GO:0016491: oxidoreductase activity	3.45E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	8.70E-11
2	GO:0009536: plastid	1.42E-05
3	GO:0043190: ATP-binding cassette (ABC) transporter complex	1.14E-04
4	GO:0005845: mRNA cap binding complex	1.14E-04
5	GO:0009941: chloroplast envelope	1.92E-04
6	GO:0005846: nuclear cap binding complex	2.65E-04
7	GO:0009528: plastid inner membrane	4.38E-04
8	GO:0016605: PML body	4.38E-04
9	GO:0005744: mitochondrial inner membrane presequence translocase complex	5.99E-04
10	GO:1990726: Lsm1-7-Pat1 complex	6.29E-04
11	GO:0009517: PSII associated light-harvesting complex II	8.35E-04
12	GO:0097526: spliceosomal tri-snRNP complex	1.05E-03
13	GO:0009570: chloroplast stroma	1.53E-03
14	GO:0005689: U12-type spliceosomal complex	1.54E-03
15	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	2.09E-03
16	GO:0005688: U6 snRNP	2.09E-03
17	GO:0071004: U2-type prespliceosome	2.09E-03
18	GO:0045273: respiratory chain complex II	2.09E-03
19	GO:0016604: nuclear body	3.02E-03
20	GO:0071013: catalytic step 2 spliceosome	3.71E-03
21	GO:0005739: mitochondrion	4.30E-03
22	GO:0019013: viral nucleocapsid	4.43E-03
23	GO:0005732: small nucleolar ribonucleoprotein complex	5.69E-03
24	GO:0070469: respiratory chain	6.45E-03
25	GO:0042651: thylakoid membrane	6.45E-03
26	GO:0045271: respiratory chain complex I	6.45E-03
27	GO:0015935: small ribosomal subunit	6.89E-03
28	GO:0031969: chloroplast membrane	1.74E-02
29	GO:0009707: chloroplast outer membrane	1.77E-02
30	GO:0005643: nuclear pore	1.77E-02
31	GO:0009535: chloroplast thylakoid membrane	2.06E-02
32	GO:0005840: ribosome	2.60E-02
33	GO:0031966: mitochondrial membrane	2.94E-02
34	GO:0005681: spliceosomal complex	3.49E-02
35	GO:0005747: mitochondrial respiratory chain complex I	3.57E-02
36	GO:0009706: chloroplast inner membrane	3.98E-02